RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 PITPNC1Q9UKF7 332 aa13.54□□□□□ -0.24
PHGDH-229ENST00000641891 LOC105371242A0A075B767 164 aa13.53□□□□□ -0.24
PHGDH-229ENST00000641891 A0A1W2PRE2 83 aa13.53□□□□□ -0.24
PHGDH-229ENST00000641891 ORM2P19652 201 aa13.53□□□□□ -0.24
PHGDH-229ENST00000641891 BPIFB3P59826 476 aa13.53□□□□□ -0.24
PHGDH-229ENST00000641891 RPL15P61313 204 aaKnown RBP13.53□□□□□ -0.24
PHGDH-229ENST00000641891 LINC00305Q7Z4B0 112 aa13.53□□□□□ -0.24
PHGDH-229ENST00000641891 MRPL41Q8IXM3 137 aaKnown RBP13.53□□□□□ -0.24
PHGDH-229ENST00000641891 OR1P1Q8NH06 330 aa13.53□□□□□ -0.24
PHGDH-229ENST00000641891 PAXXQ9BUH6 204 aa13.53□□□□□ -0.24
PHGDH-229ENST00000641891 F11RQ9Y624 299 aaKnown RBP13.53□□□□□ -0.24
PHGDH-229ENST00000641891 XKRY2A2RUG3 117 aa13.52□□□□□ -0.24
PHGDH-229ENST00000641891 HTR1DP28221 377 aa13.52□□□□□ -0.24
PHGDH-229ENST00000641891 SELENOTP62341 195 aa13.52□□□□□ -0.24
PHGDH-229ENST00000641891 ETFRF1Q6IPR1 90 aa13.52□□□□□ -0.24
PHGDH-229ENST00000641891 OR1B1Q8NGR6 318 aa13.52□□□□□ -0.24
PHGDH-229ENST00000641891 CHODLQ9H9P2 273 aa13.52□□□□□ -0.24
PHGDH-229ENST00000641891 GSN-AS1Q9NRJ2 163 aa13.52□□□□□ -0.24
PHGDH-229ENST00000641891 LY96Q9Y6Y9 160 aa13.52□□□□□ -0.24
PHGDH-229ENST00000641891 UQCRFS1P47985 274 aa13.52□□□□□ -0.25
PHGDH-229ENST00000641891 MMDQ15546 238 aa13.52□□□□□ -0.25
PHGDH-229ENST00000641891 OR11H6Q8NGC7 330 aa13.52□□□□□ -0.25
PHGDH-229ENST00000641891 LINC00479Q96M42 142 aa13.52□□□□□ -0.25
PHGDH-229ENST00000641891 PRORYQ9H606 182 aa13.52□□□□□ -0.25
PHGDH-229ENST00000641891 FABP1P07148 127 aa13.51□□□□□ -0.25
PHGDH-229ENST00000641891 DTX2Q86UW9 622 aa13.51□□□□□ -0.25
PHGDH-229ENST00000641891 TMEM183AQ8IXX5 376 aa13.51□□□□□ -0.25
PHGDH-229ENST00000641891 CFHR4Q92496 578 aa13.51□□□□□ -0.25
PHGDH-229ENST00000641891 FXYD5Q96DB9 178 aa13.51□□□□□ -0.25
PHGDH-229ENST00000641891 HIST1H2BLQ99880 126 aa13.51□□□□□ -0.25
PHGDH-229ENST00000641891 OR51M1Q9H341 326 aa13.51□□□□□ -0.25
PHGDH-229ENST00000641891 DPM3Q9P2X0 92 aa13.51□□□□□ -0.25
PHGDH-229ENST00000641891 ERVFC1-1P60608 527 aa13.51□□□□□ -0.25
PHGDH-229ENST00000641891 TMEM116Q8NCL8 245 aa13.51□□□□□ -0.25
PHGDH-229ENST00000641891 TRGV9Q99603 122 aa13.51□□□□□ -0.25
PHGDH-229ENST00000641891 RNASE7Q9H1E1 156 aaKnown RBP13.51□□□□□ -0.25
PHGDH-229ENST00000641891 IL36BQ9NZH7 164 aa13.51□□□□□ -0.25
PHGDH-229ENST00000641891 CHD8Q9HCK8 2581 aa13.51□□□□□ -0.25
PHGDH-229ENST00000641891 S100A12P80511 92 aa13.5□□□□□ -0.25
PHGDH-229ENST00000641891 ASPHD1Q5U4P2 390 aa13.5□□□□□ -0.25
PHGDH-229ENST00000641891 IGF2BP2-AS1Q96M15 143 aa13.5□□□□□ -0.25
PHGDH-229ENST00000641891 TRAPPC1Q9Y5R8 145 aa13.5□□□□□ -0.25
PHGDH-229ENST00000641891 V9GYV3 84 aa13.5□□□□□ -0.25
PHGDH-229ENST00000641891 ODF3BA8MYP8 253 aa13.49□□□□□ -0.25
PHGDH-229ENST00000641891 M0R1W7 72 aa13.49□□□□□ -0.25
PHGDH-229ENST00000641891 CNIH1O95406 144 aa13.49□□□□□ -0.25
PHGDH-229ENST00000641891 IGLV2-8P01709 118 aa13.49□□□□□ -0.25
PHGDH-229ENST00000641891 ZNF329Q86UD4 541 aa13.49□□□□□ -0.25
PHGDH-229ENST00000641891 NHLRC2Q8NBF2 726 aa13.49□□□□□ -0.25
PHGDH-229ENST00000641891 C22orf15Q8WYQ4 148 aa13.49□□□□□ -0.25
PHGDH-229ENST00000641891 UBTD1Q9HAC8 227 aa13.49□□□□□ -0.25
PHGDH-229ENST00000641891 ZFP36P26651 326 aaKnown RBP13.49□□□□□ -0.25
PHGDH-229ENST00000641891 FXYD3Q14802 87 aa13.49□□□□□ -0.25
PHGDH-229ENST00000641891 FAM103A1Q9BTL3 118 aaKnown RBP13.49□□□□□ -0.25
PHGDH-229ENST00000641891 NCOR2Q9Y618 2525 aa13.48□□□□□ -0.25
PHGDH-229ENST00000641891 FRMD6-AS1P0C7T7 363 aa13.48□□□□□ -0.25
PHGDH-229ENST00000641891 PRTN3P24158 256 aa13.48□□□□□ -0.25
PHGDH-229ENST00000641891 LEMD1Q68G75 181 aa13.48□□□□□ -0.25
PHGDH-229ENST00000641891 UNQ6494/PRO21346Q6UXR6 183 aa13.48□□□□□ -0.25
PHGDH-229ENST00000641891 PACRGQ96M98 296 aaPredicted RBP13.48□□□□□ -0.25
PHGDH-229ENST00000641891 RNF5Q99942 180 aa13.48□□□□□ -0.25
PHGDH-229ENST00000641891 WNT10AQ9GZT5 417 aa13.48□□□□□ -0.25
PHGDH-229ENST00000641891 ITPR1Q14643 2758 aa13.48□□□□□ -0.25
PHGDH-229ENST00000641891 LINC00587B1AMM8 73 aa13.48□□□□□ -0.25
PHGDH-229ENST00000641891 CORTO00230 105 aa13.48□□□□□ -0.25
PHGDH-229ENST00000641891 NBR2O15453 112 aa13.48□□□□□ -0.25
PHGDH-229ENST00000641891 MGST1P10620 155 aaKnown RBP13.48□□□□□ -0.25
PHGDH-229ENST00000641891 GPR6P46095 362 aaPredicted RBP13.48□□□□□ -0.25
PHGDH-229ENST00000641891 TIGITQ495A1 244 aa13.48□□□□□ -0.25
PHGDH-229ENST00000641891 VMO1Q7Z5L0 202 aa13.48□□□□□ -0.25
PHGDH-229ENST00000641891 DYNAPQ8N1N2 210 aa13.48□□□□□ -0.25
PHGDH-229ENST00000641891 BLNKQ8WV28 456 aa13.48□□□□□ -0.25
PHGDH-229ENST00000641891 PERPQ96FX8 193 aa13.48□□□□□ -0.25
PHGDH-229ENST00000641891 CSMD1Q96PZ7 3565 aa13.47□□□□□ -0.25
PHGDH-229ENST00000641891 TRAV34A0A0B4J273 112 aa13.47□□□□□ -0.25
PHGDH-229ENST00000641891 C19orf84I3L1E1 186 aa13.47□□□□□ -0.25
PHGDH-229ENST00000641891 I3L2K1 104 aa13.47□□□□□ -0.25
PHGDH-229ENST00000641891 AMBPP02760 352 aa13.47□□□□□ -0.25
PHGDH-229ENST00000641891 GNG5P63218 68 aa13.47□□□□□ -0.25
PHGDH-229ENST00000641891 HES1Q14469 280 aa13.47□□□□□ -0.25
PHGDH-229ENST00000641891 SSX2Q16385 188 aa13.47□□□□□ -0.25
PHGDH-229ENST00000641891 COA6Q5JTJ3 125 aaKnown RBP13.47□□□□□ -0.25
PHGDH-229ENST00000641891 ITLN2Q8WWU7 325 aaPredicted RBP13.47□□□□□ -0.25
PHGDH-229ENST00000641891 A0A1B0GUS0 222 aa13.47□□□□□ -0.25
PHGDH-229ENST00000641891 GCGP01275 180 aa13.47□□□□□ -0.25
PHGDH-229ENST00000641891 GNLYP22749 145 aa13.47□□□□□ -0.25
PHGDH-229ENST00000641891 CBLN1P23435 193 aa13.47□□□□□ -0.25
PHGDH-229ENST00000641891 RANP62826 216 aaKnown RBP13.47□□□□□ -0.25
PHGDH-229ENST00000641891 RPEL1Q2QD12 228 aa13.47□□□□□ -0.25
PHGDH-229ENST00000641891 HIVEP3Q5T1R4 2406 aa13.46□□□□□ -0.25
PHGDH-229ENST00000641891 H3BTX0 84 aa13.46□□□□□ -0.25
PHGDH-229ENST00000641891 HYPMO75409 117 aa13.46□□□□□ -0.25
PHGDH-229ENST00000641891 IGLC1P0CG04 106 aa13.46□□□□□ -0.25
PHGDH-229ENST00000641891 ADMP35318 185 aa13.46□□□□□ -0.25
PHGDH-229ENST00000641891 CEACAM3P40198 252 aa13.46□□□□□ -0.25
PHGDH-229ENST00000641891 CNN1P51911 297 aaKnown RBP13.46□□□□□ -0.25
PHGDH-229ENST00000641891 PAX2Q02962 417 aa13.46□□□□□ -0.25
PHGDH-229ENST00000641891 OR8I2Q8N0Y5 310 aa13.46□□□□□ -0.25
PHGDH-229ENST00000641891 BTF3L4Q96K17 158 aa13.46□□□□□ -0.25
PHGDH-229ENST00000641891 PEX7O00628 323 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms