RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 TRGV9Q99603 122 aa13.63□□□□□ -0.23
PHGDH-211ENST00000641213 PAXXQ9BUH6 204 aa13.63□□□□□ -0.23
PHGDH-211ENST00000641213 OR51M1Q9H341 326 aa13.63□□□□□ -0.23
PHGDH-211ENST00000641213 HTR1DP28221 377 aa13.62□□□□□ -0.23
PHGDH-211ENST00000641213 PAX2Q02962 417 aa13.62□□□□□ -0.23
PHGDH-211ENST00000641213 COA6Q5JTJ3 125 aaKnown RBP13.62□□□□□ -0.23
PHGDH-211ENST00000641213 SRSF12Q8WXF0 261 aaKnown RBP13.62□□□□□ -0.23
PHGDH-211ENST00000641213 SSBP3Q9BWW4 388 aaPredicted RBP13.62□□□□□ -0.23
PHGDH-211ENST00000641213 IL36BQ9NZH7 164 aa13.62□□□□□ -0.23
PHGDH-211ENST00000641213 DMRT1Q9Y5R6 373 aa13.62□□□□□ -0.23
PHGDH-211ENST00000641213 F11RQ9Y624 299 aaKnown RBP13.62□□□□□ -0.23
PHGDH-211ENST00000641213 IGHV3-21A0A0B4J1V1 117 aa13.62□□□□□ -0.23
PHGDH-211ENST00000641213 CORTO00230 105 aa13.62□□□□□ -0.23
PHGDH-211ENST00000641213 LINC00305Q7Z4B0 112 aa13.62□□□□□ -0.23
PHGDH-211ENST00000641213 DTX2Q86UW9 622 aa13.62□□□□□ -0.23
PHGDH-211ENST00000641213 C22orf15Q8WYQ4 148 aa13.62□□□□□ -0.23
PHGDH-211ENST00000641213 HIST1H2BLQ99880 126 aa13.62□□□□□ -0.23
PHGDH-211ENST00000641213 TRAPPC1Q9Y5R8 145 aa13.62□□□□□ -0.23
PHGDH-211ENST00000641213 SPTBN1Q01082 2364 aaKnown RBP13.61□□□□□ -0.23
PHGDH-211ENST00000641213 LOC105371242A0A075B767 164 aa13.61□□□□□ -0.23
PHGDH-211ENST00000641213 M0R1W7 72 aa13.61□□□□□ -0.23
PHGDH-211ENST00000641213 ERVFC1-1P60608 527 aa13.61□□□□□ -0.23
PHGDH-211ENST00000641213 DPM3Q9P2X0 92 aa13.61□□□□□ -0.23
PHGDH-211ENST00000641213 CHD8Q9HCK8 2581 aa13.61□□□□□ -0.23
PHGDH-211ENST00000641213 A0A1W2PPR1 153 aa13.6□□□□□ -0.23
PHGDH-211ENST00000641213 PDLIM4P50479 330 aa13.6□□□□□ -0.23
PHGDH-211ENST00000641213 KLRD1Q13241 179 aa13.6□□□□□ -0.23
PHGDH-211ENST00000641213 PLGLAQ15195 96 aa13.6□□□□□ -0.23
PHGDH-211ENST00000641213 FXYD5Q96DB9 178 aa13.6□□□□□ -0.23
PHGDH-211ENST00000641213 IGF2BP2-AS1Q96M15 143 aa13.6□□□□□ -0.23
PHGDH-211ENST00000641213 HILPDAQ9Y5L2 63 aa13.6□□□□□ -0.23
PHGDH-211ENST00000641213 V9GYV3 84 aa13.6□□□□□ -0.23
PHGDH-211ENST00000641213 NCOR2Q9Y618 2525 aa13.6□□□□□ -0.23
PHGDH-211ENST00000641213 TRAV9-1A0A075B6T8 112 aa13.6□□□□□ -0.23
PHGDH-211ENST00000641213 IGLV2-8P01709 118 aa13.6□□□□□ -0.23
PHGDH-211ENST00000641213 ORM2P19652 201 aa13.6□□□□□ -0.23
PHGDH-211ENST00000641213 TIGITQ495A1 244 aa13.6□□□□□ -0.23
PHGDH-211ENST00000641213 OR1B1Q8NGR6 318 aa13.6□□□□□ -0.23
PHGDH-211ENST00000641213 CFHR4Q92496 578 aa13.6□□□□□ -0.23
PHGDH-211ENST00000641213 PACRGQ96M98 296 aaPredicted RBP13.6□□□□□ -0.23
PHGDH-211ENST00000641213 ODF3BA8MYP8 253 aa13.59□□□□□ -0.23
PHGDH-211ENST00000641213 CDPF1Q6NVV7 123 aa13.59□□□□□ -0.23
PHGDH-211ENST00000641213 PERPQ96FX8 193 aa13.59□□□□□ -0.23
PHGDH-211ENST00000641213 PRORYQ9H606 182 aa13.59□□□□□ -0.23
PHGDH-211ENST00000641213 GCGP01275 180 aa13.59□□□□□ -0.23
PHGDH-211ENST00000641213 PRTN3P24158 256 aa13.59□□□□□ -0.23
PHGDH-211ENST00000641213 CEACAM3P40198 252 aa13.59□□□□□ -0.23
PHGDH-211ENST00000641213 MMDQ15546 238 aa13.59□□□□□ -0.23
PHGDH-211ENST00000641213 RPEL1Q2QD12 228 aa13.59□□□□□ -0.23
PHGDH-211ENST00000641213 LHFPL4Q7Z7J7 247 aa13.59□□□□□ -0.23
PHGDH-211ENST00000641213 ZNF329Q86UD4 541 aa13.59□□□□□ -0.23
PHGDH-211ENST00000641213 GSX1Q9H4S2 264 aaPredicted RBP13.59□□□□□ -0.23
PHGDH-211ENST00000641213 CNN1P51911 297 aaKnown RBP13.58□□□□□ -0.24
PHGDH-211ENST00000641213 SSX2Q16385 188 aa13.58□□□□□ -0.24
PHGDH-211ENST00000641213 IGFBPL1Q8WX77 278 aa13.58□□□□□ -0.24
PHGDH-211ENST00000641213 RNASE7Q9H1E1 156 aaKnown RBP13.58□□□□□ -0.24
PHGDH-211ENST00000641213 NBR2O15453 112 aa13.57□□□□□ -0.24
PHGDH-211ENST00000641213 CNIH1O95406 144 aa13.57□□□□□ -0.24
PHGDH-211ENST00000641213 AMBPP02760 352 aa13.57□□□□□ -0.24
PHGDH-211ENST00000641213 SFTPCP11686 197 aa13.57□□□□□ -0.24
PHGDH-211ENST00000641213 YPEL3P61236 119 aaPredicted RBP13.57□□□□□ -0.24
PHGDH-211ENST00000641213 SRSF8Q9BRL6 282 aaKnown RBP13.57□□□□□ -0.24
PHGDH-211ENST00000641213 OSTCQ9NRP0 149 aa13.57□□□□□ -0.24
PHGDH-211ENST00000641213 CDC42EP3Q9UKI2 254 aa13.57□□□□□ -0.24
PHGDH-211ENST00000641213 ABCA1O95477 2261 aa13.57□□□□□ -0.24
PHGDH-211ENST00000641213 LINC00587B1AMM8 73 aa13.57□□□□□ -0.24
PHGDH-211ENST00000641213 I3L2K1 104 aa13.57□□□□□ -0.24
PHGDH-211ENST00000641213 HYPMO75409 117 aa13.57□□□□□ -0.24
PHGDH-211ENST00000641213 CDKN1AP38936 164 aa13.57□□□□□ -0.24
PHGDH-211ENST00000641213 TAS2R60P59551 318 aa13.57□□□□□ -0.24
PHGDH-211ENST00000641213 STXBP6Q8NFX7 210 aa13.57□□□□□ -0.24
PHGDH-211ENST00000641213 LINC00479Q96M42 142 aa13.57□□□□□ -0.24
PHGDH-211ENST00000641213 WNT10AQ9GZT5 417 aa13.57□□□□□ -0.24
PHGDH-211ENST00000641213 ITPR1Q14643 2758 aa13.57□□□□□ -0.24
PHGDH-211ENST00000641213 SNRPCP09234 159 aaKnown RBP13.56□□□□□ -0.24
PHGDH-211ENST00000641213 CD24P25063 80 aa13.56□□□□□ -0.24
PHGDH-211ENST00000641213 MYCNOSP40205 109 aa13.56□□□□□ -0.24
PHGDH-211ENST00000641213 PLP1P60201 277 aa13.56□□□□□ -0.24
PHGDH-211ENST00000641213 NPBQ8NG41 125 aa13.56□□□□□ -0.24
PHGDH-211ENST00000641213 A0A1W2PRD5 423 aa13.55□□□□□ -0.24
PHGDH-211ENST00000641213 A0A1W2PRF3 423 aa13.55□□□□□ -0.24
PHGDH-211ENST00000641213 A0A1W2PRM7 423 aa13.55□□□□□ -0.24
PHGDH-211ENST00000641213 ISLRO14498 428 aa13.55□□□□□ -0.24
PHGDH-211ENST00000641213 NDUFA3O95167 84 aa13.55□□□□□ -0.24
PHGDH-211ENST00000641213 GPR6P46095 362 aaPredicted RBP13.55□□□□□ -0.24
PHGDH-211ENST00000641213 C1orf122Q6ZSJ8 110 aa13.55□□□□□ -0.24
PHGDH-211ENST00000641213 PEX7O00628 323 aa13.55□□□□□ -0.24
PHGDH-211ENST00000641213 NDUFS7O75251 213 aa13.55□□□□□ -0.24
PHGDH-211ENST00000641213 IGLC1P0CG04 106 aa13.55□□□□□ -0.24
PHGDH-211ENST00000641213 MGST1P10620 155 aaKnown RBP13.55□□□□□ -0.24
PHGDH-211ENST00000641213 ADMP35318 185 aa13.55□□□□□ -0.24
PHGDH-211ENST00000641213 FXYD3Q14802 87 aa13.55□□□□□ -0.24
PHGDH-211ENST00000641213 FBLN7Q53RD9 439 aa13.55□□□□□ -0.24
PHGDH-211ENST00000641213 CBLN1P23435 193 aa13.54□□□□□ -0.24
PHGDH-211ENST00000641213 RANP62826 216 aaKnown RBP13.54□□□□□ -0.24
PHGDH-211ENST00000641213 IBA57Q5T440 356 aaKnown RBP13.54□□□□□ -0.24
PHGDH-211ENST00000641213 VMO1Q7Z5L0 202 aa13.54□□□□□ -0.24
PHGDH-211ENST00000641213 OR8I2Q8N0Y5 310 aa13.54□□□□□ -0.24
PHGDH-211ENST00000641213 NHLRC2Q8NBF2 726 aa13.54□□□□□ -0.24
PHGDH-211ENST00000641213 BLNKQ8WV28 456 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms