RNA–Protein interactions for RNA: ENST00000640421.1

SPIN3-238, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 1,872 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-238	ENST00000640421	IGKV1-17	P01599	117 aa		13.73	□□□□□ -0.21
SPIN3-238	ENST00000640421	C4BPB	P20851	252 aa		13.73	□□□□□ -0.21
SPIN3-238	ENST00000640421	ATP6V0C	P27449	155 aa		13.73	□□□□□ -0.21
SPIN3-238	ENST00000640421	FCGR2B	P31994	310 aa	Predicted RBP	13.73	□□□□□ -0.21
SPIN3-238	ENST00000640421	GPR183	P32249	361 aa		13.73	□□□□□ -0.21
SPIN3-238	ENST00000640421	ZNF90	Q03938	601 aa		13.73	□□□□□ -0.21
SPIN3-238	ENST00000640421		Q56UQ5	140 aa		13.73	□□□□□ -0.21
SPIN3-238	ENST00000640421	CLEC19A	Q6UXS0	136 aa		13.73	□□□□□ -0.21
SPIN3-238	ENST00000640421	BAP18	Q8IXM2	172 aa		13.73	□□□□□ -0.21
SPIN3-238	ENST00000640421	OR5B12	Q96R08	314 aa		13.73	□□□□□ -0.21
SPIN3-238	ENST00000640421	CHRDL1	Q9BU40	450 aa		13.73	□□□□□ -0.21
SPIN3-238	ENST00000640421	AGPAT2	O15120	278 aa		13.72	□□□□□ -0.21
SPIN3-238	ENST00000640421	CLEC3B	P05452	202 aa		13.72	□□□□□ -0.21
SPIN3-238	ENST00000640421	CTSG	P08311	255 aa		13.72	□□□□□ -0.21
SPIN3-238	ENST00000640421	CD28	P10747	220 aa		13.72	□□□□□ -0.21
SPIN3-238	ENST00000640421	GATA2	P23769	480 aa	Predicted RBP	13.72	□□□□□ -0.21
SPIN3-238	ENST00000640421	OR10J1	P30954	320 aa		13.72	□□□□□ -0.21
SPIN3-238	ENST00000640421	ADM	P35318	185 aa		13.72	□□□□□ -0.21
SPIN3-238	ENST00000640421	KRTAP10-3	P60369	221 aa		13.72	□□□□□ -0.21
SPIN3-238	ENST00000640421	KRTAP24-1	Q3LI83	254 aa		13.72	□□□□□ -0.21
SPIN3-238	ENST00000640421	C18orf65	Q6ZTR6	163 aa		13.72	□□□□□ -0.21
SPIN3-238	ENST00000640421	COMMD1	Q8N668	190 aa		13.72	□□□□□ -0.21
SPIN3-238	ENST00000640421	SCGB1C1	Q8TD33	95 aa		13.72	□□□□□ -0.21
SPIN3-238	ENST00000640421	ZNF414	Q96IQ9	312 aa		13.72	□□□□□ -0.21
SPIN3-238	ENST00000640421	GGTLC1	Q9BX51	225 aa		13.72	□□□□□ -0.21
SPIN3-238	ENST00000640421	TRBV7-1	A0A0A6YYK4	115 aa		13.72	□□□□□ -0.21
SPIN3-238	ENST00000640421		A0A0G2JLM5	398 aa		13.72	□□□□□ -0.21
SPIN3-238	ENST00000640421	ZFP92	A6NM28	416 aa		13.72	□□□□□ -0.21
SPIN3-238	ENST00000640421	TPT1	P13693	172 aa	Known RBP	13.72	□□□□□ -0.21
SPIN3-238	ENST00000640421	NPBWR1	P48145	328 aa		13.72	□□□□□ -0.21
SPIN3-238	ENST00000640421	CAMLG	P49069	296 aa		13.72	□□□□□ -0.21
SPIN3-238	ENST00000640421	TIGIT	Q495A1	244 aa		13.72	□□□□□ -0.21
SPIN3-238	ENST00000640421	ZNF343	Q6P1L6	599 aa		13.72	□□□□□ -0.21
SPIN3-238	ENST00000640421	OR4X2	Q8NGF9	303 aa		13.72	□□□□□ -0.21
SPIN3-238	ENST00000640421	PPP5D1	E7EU14	171 aa		13.71	□□□□□ -0.21
SPIN3-238	ENST00000640421	GNG7	O60262	68 aa		13.71	□□□□□ -0.21
SPIN3-238	ENST00000640421	TXN2	Q99757	166 aa		13.71	□□□□□ -0.21
SPIN3-238	ENST00000640421	SLC25A32	Q9H2D1	315 aa		13.71	□□□□□ -0.21
SPIN3-238	ENST00000640421	PLA2G2E	Q9NZK7	142 aa		13.71	□□□□□ -0.21
SPIN3-238	ENST00000640421	SLC45A2	Q9UMX9	530 aa		13.71	□□□□□ -0.21
SPIN3-238	ENST00000640421	TCRBV4S1A1T	A0A5B7	111 aa		13.7	□□□□□ -0.22
SPIN3-238	ENST00000640421	MPDU1	O75352	247 aa		13.7	□□□□□ -0.22
SPIN3-238	ENST00000640421	SPP1	P10451	314 aa		13.7	□□□□□ -0.22
SPIN3-238	ENST00000640421	IFITM2	Q01629	132 aa		13.7	□□□□□ -0.22
SPIN3-238	ENST00000640421	MIC13	Q5XKP0	118 aa		13.7	□□□□□ -0.22
SPIN3-238	ENST00000640421	TMED6	Q8WW62	240 aa		13.7	□□□□□ -0.22
SPIN3-238	ENST00000640421	UBE2E2	Q96LR5	201 aa		13.7	□□□□□ -0.22
SPIN3-238	ENST00000640421	TRGV9	Q99603	122 aa		13.7	□□□□□ -0.22
SPIN3-238	ENST00000640421	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	13.7	□□□□□ -0.22
SPIN3-238	ENST00000640421	ANKRD34B	A5PLL1	514 aa		13.7	□□□□□ -0.22
SPIN3-238	ENST00000640421	COL6A5	A8TX70	2615 aa		13.69	□□□□□ -0.22
SPIN3-238	ENST00000640421	IGHV3-35	A0A0C4DH35	117 aa		13.69	□□□□□ -0.22
SPIN3-238	ENST00000640421	ALKAL2	Q6UX46	152 aa		13.69	□□□□□ -0.22
SPIN3-238	ENST00000640421	CYP2G1P	Q6ZSU1	146 aa		13.69	□□□□□ -0.22
SPIN3-238	ENST00000640421	BPIFC	Q8NFQ6	507 aa		13.69	□□□□□ -0.22
SPIN3-238	ENST00000640421	CITED2	Q99967	270 aa	Predicted RBP	13.69	□□□□□ -0.22
SPIN3-238	ENST00000640421	TGOLN2	O43493	480 aa		13.68	□□□□□ -0.22
SPIN3-238	ENST00000640421	LINC00869	P0C866	280 aa		13.68	□□□□□ -0.22
SPIN3-238	ENST00000640421	PRR20E	P86478	221 aa		13.68	□□□□□ -0.22
SPIN3-238	ENST00000640421	PRR20C	P86479	221 aa		13.68	□□□□□ -0.22
SPIN3-238	ENST00000640421	PRR20D	P86480	221 aa		13.68	□□□□□ -0.22
SPIN3-238	ENST00000640421	PRR20B	P86481	221 aa		13.68	□□□□□ -0.22
SPIN3-238	ENST00000640421	PRR20A	P86496	221 aa		13.68	□□□□□ -0.22
SPIN3-238	ENST00000640421	KHDC1L	Q5JSQ8	128 aa		13.68	□□□□□ -0.22
SPIN3-238	ENST00000640421	TEX261	Q6UWH6	196 aa		13.68	□□□□□ -0.22
SPIN3-238	ENST00000640421	STPG3	Q8N7X2	389 aa		13.68	□□□□□ -0.22
SPIN3-238	ENST00000640421		I3L521	148 aa		13.67	□□□□□ -0.22
SPIN3-238	ENST00000640421	BMPR1B	O00238	502 aa		13.67	□□□□□ -0.22
SPIN3-238	ENST00000640421	PSG1	P11464	419 aa		13.67	□□□□□ -0.22
SPIN3-238	ENST00000640421	CDX1	P47902	265 aa	Predicted RBP	13.67	□□□□□ -0.22
SPIN3-238	ENST00000640421	EIF5A	P63241	154 aa	Known RBP	13.67	□□□□□ -0.22
SPIN3-238	ENST00000640421	WFDC12	Q8WWY7	111 aa		13.67	□□□□□ -0.22
SPIN3-238	ENST00000640421	GNPNAT1	Q96EK6	184 aa	Predicted RBP	13.67	□□□□□ -0.22
SPIN3-238	ENST00000640421	PSMG3	Q9BT73	122 aa	Predicted RBP	13.67	□□□□□ -0.22
SPIN3-238	ENST00000640421	VSIR	Q9H7M9	311 aa		13.67	□□□□□ -0.22
SPIN3-238	ENST00000640421	PXMP4	Q9Y6I8	212 aa		13.67	□□□□□ -0.22
SPIN3-238	ENST00000640421	STAB1	Q9NY15	2570 aa		13.67	□□□□□ -0.22
SPIN3-238	ENST00000640421	VWF	P04275	2813 aa		13.67	□□□□□ -0.22
SPIN3-238	ENST00000640421		A0A1B0GUS0	222 aa		13.67	□□□□□ -0.22
SPIN3-238	ENST00000640421	YIF1A	O95070	293 aa		13.67	□□□□□ -0.22
SPIN3-238	ENST00000640421	LGALS1	P09382	135 aa	Known RBP	13.67	□□□□□ -0.22
SPIN3-238	ENST00000640421	RPL29	P47914	159 aa	Known RBP	13.67	□□□□□ -0.22
SPIN3-238	ENST00000640421	FOXL1	Q12952	345 aa		13.67	□□□□□ -0.22
SPIN3-238	ENST00000640421	RAB31	Q13636	194 aa		13.67	□□□□□ -0.22
SPIN3-238	ENST00000640421	AWAT1	Q58HT5	328 aa		13.67	□□□□□ -0.22
SPIN3-238	ENST00000640421	GCSAML	Q5JQS6	135 aa		13.67	□□□□□ -0.22
SPIN3-238	ENST00000640421	FAM74A1	Q5RGS3	127 aa		13.67	□□□□□ -0.22
SPIN3-238	ENST00000640421	ZNF709	Q8N972	641 aa		13.67	□□□□□ -0.22
SPIN3-238	ENST00000640421	OR2G3	Q8NGZ4	309 aa		13.67	□□□□□ -0.22
SPIN3-238	ENST00000640421	ATP6V0B	Q99437	205 aa		13.67	□□□□□ -0.22
SPIN3-238	ENST00000640421	TIMM9	Q9Y5J7	89 aa		13.67	□□□□□ -0.22
SPIN3-238	ENST00000640421	TRAV30	A0A087WSZ9	112 aa		13.66	□□□□□ -0.22
SPIN3-238	ENST00000640421	SEC11B	P0C7V7	166 aa		13.66	□□□□□ -0.22
SPIN3-238	ENST00000640421	ARL3	P36405	182 aa		13.66	□□□□□ -0.22
SPIN3-238	ENST00000640421	ELL	P55199	621 aa	Predicted RBP	13.66	□□□□□ -0.22
SPIN3-238	ENST00000640421	DEFB136	Q30KP8	78 aa		13.66	□□□□□ -0.22
SPIN3-238	ENST00000640421	PEF1	Q9UBV8	284 aa	Known RBP	13.66	□□□□□ -0.22
SPIN3-238	ENST00000640421	C17orf112	F2Z3M2	114 aa		13.65	□□□□□ -0.22
SPIN3-238	ENST00000640421	NUPL2	O15504	423 aa	Known RBP	13.65	□□□□□ -0.22
SPIN3-238	ENST00000640421	YPEL3	P61236	119 aa	Predicted RBP	13.65	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms