RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 RAB11AP62491 216 aa11.68□□□□□ -0.54
SNRNP48-203ENST00000634363 RPP30P78346 268 aaKnown RBP11.68□□□□□ -0.54
SNRNP48-203ENST00000634363 DEFB114Q30KQ6 69 aa11.68□□□□□ -0.54
SNRNP48-203ENST00000634363 UNQ9165/PRO28630Q6UXU0 137 aa11.68□□□□□ -0.54
SNRNP48-203ENST00000634363 TMEM190Q8WZ59 177 aa11.68□□□□□ -0.54
SNRNP48-203ENST00000634363 MAGT1Q9H0U3 335 aa11.68□□□□□ -0.54
SNRNP48-203ENST00000634363 FNDC4Q9H6D8 234 aaPredicted RBP11.68□□□□□ -0.54
SNRNP48-203ENST00000634363 PAIP2BQ9ULR5 123 aaKnown RBP11.68□□□□□ -0.54
SNRNP48-203ENST00000634363 LYSTQ99698 3801 aa11.67□□□□□ -0.54
SNRNP48-203ENST00000634363 FAM25EA8MYX2 175 aa11.67□□□□□ -0.54
SNRNP48-203ENST00000634363 INMT-MINDY4F8WBC2 141 aa11.67□□□□□ -0.54
SNRNP48-203ENST00000634363 CCSO14618 274 aa11.67□□□□□ -0.54
SNRNP48-203ENST00000634363 PRAF2O60831 178 aa11.67□□□□□ -0.54
SNRNP48-203ENST00000634363 CTSGP08311 255 aa11.67□□□□□ -0.54
SNRNP48-203ENST00000634363 SLC25A4P12235 298 aa11.67□□□□□ -0.54
SNRNP48-203ENST00000634363 EDN2P20800 178 aa11.67□□□□□ -0.54
SNRNP48-203ENST00000634363 OR4D5Q8NGN0 318 aa11.67□□□□□ -0.54
SNRNP48-203ENST00000634363 OR4X1Q8NH49 305 aa11.67□□□□□ -0.54
SNRNP48-203ENST00000634363 TMEM170AQ8WVE7 144 aa11.67□□□□□ -0.54
SNRNP48-203ENST00000634363 C20orf24Q9BUV8 137 aa11.67□□□□□ -0.54
SNRNP48-203ENST00000634363 GSKIPQ9P0R6 139 aa11.67□□□□□ -0.54
SNRNP48-203ENST00000634363 TMEM213A2RRL7 107 aa11.66□□□□□ -0.54
SNRNP48-203ENST00000634363 C5orf51A6NDU8 294 aa11.66□□□□□ -0.54
SNRNP48-203ENST00000634363 CLN5O75503 358 aa11.66□□□□□ -0.54
SNRNP48-203ENST00000634363 YIF1AO95070 293 aa11.66□□□□□ -0.54
SNRNP48-203ENST00000634363 FOLR2P14207 255 aa11.66□□□□□ -0.54
SNRNP48-203ENST00000634363 ELLP55199 621 aaPredicted RBP11.66□□□□□ -0.54
SNRNP48-203ENST00000634363 POLR2GP62487 172 aaKnown RBP eCLIP11.66□□□□□ -0.54
SNRNP48-203ENST00000634363 ID3Q02535 119 aa11.66□□□□□ -0.54
SNRNP48-203ENST00000634363 ZBTB8BQ8NAP8 495 aaPredicted RBP11.66□□□□□ -0.54
SNRNP48-203ENST00000634363 MARC2Q969Z3 335 aa11.66□□□□□ -0.54
SNRNP48-203ENST00000634363 WDR89Q96FK6 387 aaPredicted RBP11.66□□□□□ -0.54
SNRNP48-203ENST00000634363 OR10C1Q96KK4 312 aa11.66□□□□□ -0.54
SNRNP48-203ENST00000634363 DAZ1Q9NQZ3 744 aaKnown RBP11.66□□□□□ -0.54
SNRNP48-203ENST00000634363 TRAV30A0A087WSZ9 112 aa11.65□□□□□ -0.54
SNRNP48-203ENST00000634363 SSSCA1O60232 199 aa11.65□□□□□ -0.54
SNRNP48-203ENST00000634363 CBLN1P23435 193 aa11.65□□□□□ -0.54
SNRNP48-203ENST00000634363 RND2P52198 227 aa11.65□□□□□ -0.54
SNRNP48-203ENST00000634363 MLANAQ16655 118 aa11.65□□□□□ -0.54
SNRNP48-203ENST00000634363 TM4SF20Q53R12 229 aa11.65□□□□□ -0.54
SNRNP48-203ENST00000634363 SLC16A13Q7RTY0 426 aa11.65□□□□□ -0.54
SNRNP48-203ENST00000634363 CACNG8Q8WXS5 425 aa11.65□□□□□ -0.54
SNRNP48-203ENST00000634363 MARVELD1Q9BSK0 173 aa11.65□□□□□ -0.54
SNRNP48-203ENST00000634363 TECRQ9NZ01 308 aaKnown RBP11.65□□□□□ -0.54
SNRNP48-203ENST00000634363 EPPK1P58107 5090 aaKnown RBP11.64□□□□□ -0.55
SNRNP48-203ENST00000634363 C15orf62A8K5M9 175 aa11.64□□□□□ -0.55
SNRNP48-203ENST00000634363 SNRPGP15A8MWD9 76 aa11.64□□□□□ -0.55
SNRNP48-203ENST00000634363 H3BP45 60 aa11.64□□□□□ -0.55
SNRNP48-203ENST00000634363 TMEM50AO95807 157 aa11.64□□□□□ -0.55
SNRNP48-203ENST00000634363 LY6G6CO95867 125 aa11.64□□□□□ -0.55
SNRNP48-203ENST00000634363 SPANXN5Q5MJ07 72 aa11.64□□□□□ -0.55
SNRNP48-203ENST00000634363 PRSS54Q6PEW0 395 aa11.64□□□□□ -0.55
SNRNP48-203ENST00000634363 GSG1LQ6UXU4 331 aa11.64□□□□□ -0.55
SNRNP48-203ENST00000634363 ZNF600Q6ZNG1 722 aa11.64□□□□□ -0.55
SNRNP48-203ENST00000634363 ACY3Q96HD9 319 aa11.64□□□□□ -0.55
SNRNP48-203ENST00000634363 SLC35E1Q96K37 410 aa11.64□□□□□ -0.55
SNRNP48-203ENST00000634363 GINS3Q9BRX5 216 aa11.64□□□□□ -0.55
SNRNP48-203ENST00000634363 MRPL36Q9P0J6 103 aaKnown RBP11.64□□□□□ -0.55
SNRNP48-203ENST00000634363 MRPL27Q9P0M9 148 aaKnown RBP11.64□□□□□ -0.55
SNRNP48-203ENST00000634363 STRAPQ9Y3F4 350 aaKnown RBP11.64□□□□□ -0.55
SNRNP48-203ENST00000634363 SACSQ9NZJ4 4579 aa11.64□□□□□ -0.55
SNRNP48-203ENST00000634363 IGHV3OR16-8A0A075B7F1 116 aa11.63□□□□□ -0.55
SNRNP48-203ENST00000634363 PTTG1O95997 202 aa11.63□□□□□ -0.55
SNRNP48-203ENST00000634363 TMEM116Q8NCL8 245 aa11.63□□□□□ -0.55
SNRNP48-203ENST00000634363 OR1S2Q8NGQ3 325 aa11.63□□□□□ -0.55
SNRNP48-203ENST00000634363 C2orf50Q96LR7 162 aa11.63□□□□□ -0.55
SNRNP48-203ENST00000634363 PSENENQ9NZ42 101 aa11.63□□□□□ -0.55
SNRNP48-203ENST00000634363 STARD9Q9P2P6 4700 aa11.62□□□□□ -0.55
SNRNP48-203ENST00000634363 K7EMT4 169 aa11.62□□□□□ -0.55
SNRNP48-203ENST00000634363 ZNF207O43670 478 aaKnown RBP11.62□□□□□ -0.55
SNRNP48-203ENST00000634363 OR10J1P30954 320 aa11.62□□□□□ -0.55
SNRNP48-203ENST00000634363 GPX4P36969 197 aaPredicted RBP11.62□□□□□ -0.55
SNRNP48-203ENST00000634363 PMS2P11Q13670 270 aa11.62□□□□□ -0.55
SNRNP48-203ENST00000634363 BTNL8Q6UX41 500 aa11.62□□□□□ -0.55
SNRNP48-203ENST00000634363 NPIPB3Q92617 1050 aa11.62□□□□□ -0.55
SNRNP48-203ENST00000634363 RAB40CQ96S21 281 aa11.62□□□□□ -0.55
SNRNP48-203ENST00000634363 PUS1Q9Y606 427 aaKnown RBP eCLIP11.62□□□□□ -0.55
SNRNP48-203ENST00000634363 DNAH1Q9P2D7 4330 aa11.61□□□□□ -0.55
SNRNP48-203ENST00000634363 CXorf65A6NEN9 183 aa11.61□□□□□ -0.55
SNRNP48-203ENST00000634363 L7N2F9 121 aa11.61□□□□□ -0.55
SNRNP48-203ENST00000634363 SCAF4O95104 1147 aaKnown RBP11.61□□□□□ -0.55
SNRNP48-203ENST00000634363 MBPP02686 304 aaPredicted RBP11.61□□□□□ -0.55
SNRNP48-203ENST00000634363 IGLC1P0CG04 106 aa11.61□□□□□ -0.55
SNRNP48-203ENST00000634363 BMI1P35226 326 aa11.61□□□□□ -0.55
SNRNP48-203ENST00000634363 VAMP2P63027 116 aa11.61□□□□□ -0.55
SNRNP48-203ENST00000634363 TIGITQ495A1 244 aa11.61□□□□□ -0.55
SNRNP48-203ENST00000634363 TOMM20LQ6UXN7 152 aa11.61□□□□□ -0.55
SNRNP48-203ENST00000634363 SMIM8Q96KF7 97 aa11.61□□□□□ -0.55
SNRNP48-203ENST00000634363 OVOL2Q9BRP0 275 aa11.61□□□□□ -0.55
SNRNP48-203ENST00000634363 MLXQ9UH92 298 aa11.61□□□□□ -0.55
SNRNP48-203ENST00000634363 RCL1Q9Y2P8 373 aaKnown RBP11.61□□□□□ -0.55
SNRNP48-203ENST00000634363 LSM5Q9Y4Y9 91 aaKnown RBP11.61□□□□□ -0.55
SNRNP48-203ENST00000634363 TRAV14DV4A0A0A6YYC5 116 aa11.6□□□□□ -0.55
SNRNP48-203ENST00000634363 GOSR2O14653 212 aa11.6□□□□□ -0.55
SNRNP48-203ENST00000634363 SSNA1O43805 119 aa11.6□□□□□ -0.55
SNRNP48-203ENST00000634363 IGKV1-17P01599 117 aa11.6□□□□□ -0.55
SNRNP48-203ENST00000634363 C8orf88P0DMB2 117 aa11.6□□□□□ -0.55
SNRNP48-203ENST00000634363 TAS2R30P59541 319 aa11.6□□□□□ -0.55
SNRNP48-203ENST00000634363 S100A10P60903 97 aa11.6□□□□□ -0.55
SNRNP48-203ENST00000634363 TMEM61Q8N0U2 210 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms