RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 PMS2P5A8MQ11 134 aa8.29□□□□□ -1.08
DDX41-219ENST00000629036 TSPAN4O14817 238 aa8.29□□□□□ -1.08
DDX41-219ENST00000629036 SLC25A4P12235 298 aa8.29□□□□□ -1.08
DDX41-219ENST00000629036 PAX9P55771 341 aa8.29□□□□□ -1.08
DDX41-219ENST00000629036 TIGITQ495A1 244 aa8.29□□□□□ -1.08
DDX41-219ENST00000629036 SLC16A13Q7RTY0 426 aa8.29□□□□□ -1.08
DDX41-219ENST00000629036 CITED4Q96RK1 184 aa8.29□□□□□ -1.08
DDX41-219ENST00000629036 RNF2Q99496 336 aa8.29□□□□□ -1.08
DDX41-219ENST00000629036 ASCL2Q99929 193 aa8.29□□□□□ -1.08
DDX41-219ENST00000629036 NEURL2Q9BR09 285 aa8.29□□□□□ -1.08
DDX41-219ENST00000629036 TM2D3Q9BRN9 247 aa8.29□□□□□ -1.08
DDX41-219ENST00000629036 C20orf24Q9BUV8 137 aa8.29□□□□□ -1.08
DDX41-219ENST00000629036 MAGT1Q9H0U3 335 aa8.29□□□□□ -1.08
DDX41-219ENST00000629036 HIPK2Q9H2X6 1198 aa8.29□□□□□ -1.08
DDX41-219ENST00000629036 C11orf1Q9H5F2 150 aa8.29□□□□□ -1.08
DDX41-219ENST00000629036 RCL1Q9Y2P8 373 aaKnown RBP8.29□□□□□ -1.08
DDX41-219ENST00000629036 PUS1Q9Y606 427 aaKnown RBP eCLIP8.29□□□□□ -1.08
DDX41-219ENST00000629036 U3KQE9 123 aa8.29□□□□□ -1.08
DDX41-219ENST00000629036 DNAH1Q9P2D7 4330 aa8.29□□□□□ -1.08
DDX41-219ENST00000629036 IGHV3-49A0A0A0MS15 119 aa8.28□□□□□ -1.08
DDX41-219ENST00000629036 RBMY1BA6NDE4 496 aaKnown RBP8.28□□□□□ -1.08
DDX41-219ENST00000629036 RBMY1EA6NEQ0 496 aaKnown RBP8.28□□□□□ -1.08
DDX41-219ENST00000629036 SYNGR2O43760 224 aa8.28□□□□□ -1.08
DDX41-219ENST00000629036 RBMY1DP0C7P1 496 aaKnown RBP8.28□□□□□ -1.08
DDX41-219ENST00000629036 ATP5IP56385 69 aaPredicted RBP8.28□□□□□ -1.08
DDX41-219ENST00000629036 CD81P60033 236 aa8.28□□□□□ -1.08
DDX41-219ENST00000629036 POLR2GP62487 172 aaKnown RBP eCLIP8.28□□□□□ -1.08
DDX41-219ENST00000629036 GAMTQ14353 236 aa8.28□□□□□ -1.08
DDX41-219ENST00000629036 ODF3L2Q3SX64 289 aa8.28□□□□□ -1.08
DDX41-219ENST00000629036 C4orf46Q504U0 113 aa8.28□□□□□ -1.08
DDX41-219ENST00000629036 COQ8AQ8NI60 647 aa8.28□□□□□ -1.08
DDX41-219ENST00000629036 ST8SIA2Q92186 375 aa8.28□□□□□ -1.08
DDX41-219ENST00000629036 RHPN1-AS1Q9BWJ2 59 aa8.28□□□□□ -1.08
DDX41-219ENST00000629036 LYSTQ99698 3801 aa8.28□□□□□ -1.08
DDX41-219ENST00000629036 RPS10-NUDT3A0A1W2PQS6 291 aa8.27□□□□□ -1.09
DDX41-219ENST00000629036 C3orf84H3BNL1 204 aa8.27□□□□□ -1.09
DDX41-219ENST00000629036 CCSO14618 274 aa8.27□□□□□ -1.09
DDX41-219ENST00000629036 IFNA10P01566 189 aa8.27□□□□□ -1.09
DDX41-219ENST00000629036 H2AFB2P0C5Z0 115 aa8.27□□□□□ -1.09
DDX41-219ENST00000629036 CRYBB3P26998 211 aa8.27□□□□□ -1.09
DDX41-219ENST00000629036 OR10J1P30954 320 aa8.27□□□□□ -1.09
DDX41-219ENST00000629036 YPEL3P61236 119 aaPredicted RBP8.27□□□□□ -1.09
DDX41-219ENST00000629036 IL15RAQ13261 267 aa8.27□□□□□ -1.09
DDX41-219ENST00000629036 USF2Q15853 346 aaPredicted RBP8.27□□□□□ -1.09
DDX41-219ENST00000629036 DEFB125Q8N687 156 aa8.27□□□□□ -1.09
DDX41-219ENST00000629036 ZBTB8BQ8NAP8 495 aaPredicted RBP8.27□□□□□ -1.09
DDX41-219ENST00000629036 OR1S2Q8NGQ3 325 aa8.27□□□□□ -1.09
DDX41-219ENST00000629036 ZNF431Q8TF32 576 aaPredicted RBP8.27□□□□□ -1.09
DDX41-219ENST00000629036 NPIPB3Q92617 1050 aa8.27□□□□□ -1.09
DDX41-219ENST00000629036 SPAG8Q99932 426 aaPredicted RBP8.27□□□□□ -1.09
DDX41-219ENST00000629036 IGHV3OR16-13A0A075B7E8 117 aa8.26□□□□□ -1.09
DDX41-219ENST00000629036 TRAV30A0A087WSZ9 112 aa8.26□□□□□ -1.09
DDX41-219ENST00000629036 IGHV3-74A0A0B4J1X5 117 aa8.26□□□□□ -1.09
DDX41-219ENST00000629036 FAM240BA0A1B0GVZ2 78 aa8.26□□□□□ -1.09
DDX41-219ENST00000629036 H3BP45 60 aa8.26□□□□□ -1.09
DDX41-219ENST00000629036 WRBO00258 174 aa8.26□□□□□ -1.09
DDX41-219ENST00000629036 MED6O75586 246 aa8.26□□□□□ -1.09
DDX41-219ENST00000629036 CCNKO75909 580 aa8.26□□□□□ -1.09
DDX41-219ENST00000629036 IL5P05113 134 aa8.26□□□□□ -1.09
DDX41-219ENST00000629036 NHLRC4P0CG21 123 aaPredicted RBP8.26□□□□□ -1.09
DDX41-219ENST00000629036 GPX4P36969 197 aaPredicted RBP8.26□□□□□ -1.09
DDX41-219ENST00000629036 GUCA2BQ16661 112 aa8.26□□□□□ -1.09
DDX41-219ENST00000629036 IAH1Q2TAA2 248 aaPredicted RBP8.26□□□□□ -1.09
DDX41-219ENST00000629036 NRARPQ7Z6K4 114 aa8.26□□□□□ -1.09
DDX41-219ENST00000629036 GTSCR1Q86UQ5 136 aa8.26□□□□□ -1.09
DDX41-219ENST00000629036 NOXA1Q86UR1 476 aa8.26□□□□□ -1.09
DDX41-219ENST00000629036 STPG3Q8N7X2 389 aa8.26□□□□□ -1.09
DDX41-219ENST00000629036 THAP8Q8NA92 274 aa8.26□□□□□ -1.09
DDX41-219ENST00000629036 U3KQK5 164 aa8.26□□□□□ -1.09
DDX41-219ENST00000629036 HYDINQ4G0P3 5121 aa8.26□□□□□ -1.09
DDX41-219ENST00000629036 TRAV14DV4A0A0A6YYC5 116 aa8.25□□□□□ -1.09
DDX41-219ENST00000629036 YIF1AO95070 293 aa8.25□□□□□ -1.09
DDX41-219ENST00000629036 TOMM40O96008 361 aa8.25□□□□□ -1.09
DDX41-219ENST00000629036 MBPP02686 304 aaPredicted RBP8.25□□□□□ -1.09
DDX41-219ENST00000629036 NKX2-1P43699 371 aaPredicted RBP8.25□□□□□ -1.09
DDX41-219ENST00000629036 HAGHQ16775 308 aa8.25□□□□□ -1.09
DDX41-219ENST00000629036 MZT2BQ6NZ67 158 aa8.25□□□□□ -1.09
DDX41-219ENST00000629036 TMEM14EPQ6UXP3 125 aa8.25□□□□□ -1.09
DDX41-219ENST00000629036 GLMPQ8WWB7 406 aa8.25□□□□□ -1.09
DDX41-219ENST00000629036 ACY3Q96HD9 319 aa8.25□□□□□ -1.09
DDX41-219ENST00000629036 CIB3Q96Q77 187 aaPredicted RBP8.25□□□□□ -1.09
DDX41-219ENST00000629036 OR11H12B2RN74 326 aa8.24□□□□□ -1.09
DDX41-219ENST00000629036 SSSCA1O60232 199 aa8.24□□□□□ -1.09
DDX41-219ENST00000629036 IFNA4P05014 189 aa8.24□□□□□ -1.09
DDX41-219ENST00000629036 PSG1P11464 419 aa8.24□□□□□ -1.09
DDX41-219ENST00000629036 ZNF90Q03938 601 aa8.24□□□□□ -1.09
DDX41-219ENST00000629036 ARL16Q0P5N6 197 aa8.24□□□□□ -1.09
DDX41-219ENST00000629036 CASC10Q5T4H9 136 aa8.24□□□□□ -1.09
DDX41-219ENST00000629036 ETFRF1Q6IPR1 90 aa8.24□□□□□ -1.09
DDX41-219ENST00000629036 ACOT7LQ6ZUV0 252 aa8.24□□□□□ -1.09
DDX41-219ENST00000629036 C12orf45Q8N5I9 185 aaPredicted RBP8.24□□□□□ -1.09
DDX41-219ENST00000629036 FAM24BQ8N5W8 94 aa8.24□□□□□ -1.09
DDX41-219ENST00000629036 SMIM8Q96KF7 97 aa8.24□□□□□ -1.09
DDX41-219ENST00000629036 FAM110AQ9BQ89 295 aa8.24□□□□□ -1.09
DDX41-219ENST00000629036 GINS3Q9BRX5 216 aa8.24□□□□□ -1.09
DDX41-219ENST00000629036 MARVELD1Q9BSK0 173 aa8.24□□□□□ -1.09
DDX41-219ENST00000629036 SRD5A3Q9H8P0 318 aa8.24□□□□□ -1.09
DDX41-219ENST00000629036 IGHV3-66A0A0C4DH42 116 aa8.23□□□□□ -1.09
DDX41-219ENST00000629036 C7orf66A4D0T2 115 aa8.23□□□□□ -1.09
DDX41-219ENST00000629036 K7EPK0 472 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms