RNA–Protein interactions for RNA: ENST00000625778.2

UBE3A-209, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-209ENST00000625778 TNFRSF14Q92956 283 aa11.31□□□□□ -0.6
UBE3A-209ENST00000625778 TMEM70Q9BUB7 260 aa11.31□□□□□ -0.6
UBE3A-209ENST00000625778 MRPS16Q9Y3D3 137 aaKnown RBP11.31□□□□□ -0.6
UBE3A-209ENST00000625778 C9orf172C9J069 976 aa11.31□□□□□ -0.6
UBE3A-209ENST00000625778 NDUFS8O00217 210 aa11.31□□□□□ -0.6
UBE3A-209ENST00000625778 REG1AP05451 166 aa11.31□□□□□ -0.6
UBE3A-209ENST00000625778 C10orf55Q5SWW7 151 aa11.31□□□□□ -0.6
UBE3A-209ENST00000625778 CFAP161Q6P656 301 aa11.31□□□□□ -0.6
UBE3A-209ENST00000625778 PPP1R35Q8TAP8 253 aa11.31□□□□□ -0.6
UBE3A-209ENST00000625778 ASCL2Q99929 193 aa11.31□□□□□ -0.6
UBE3A-209ENST00000625778 SLC25A33Q9BSK2 321 aa11.31□□□□□ -0.6
UBE3A-209ENST00000625778 PAXXQ9BUH6 204 aa11.31□□□□□ -0.6
UBE3A-209ENST00000625778 HILPDAQ9Y5L2 63 aa11.31□□□□□ -0.6
UBE3A-209ENST00000625778 PCSK5Q92824 1860 aa11.31□□□□□ -0.6
UBE3A-209ENST00000625778 IGHV1-69-2A0A0G2JMI3 117 aa11.31□□□□□ -0.6
UBE3A-209ENST00000625778 SRRM4A7MD48 611 aaKnown RBP11.31□□□□□ -0.6
UBE3A-209ENST00000625778 SLC25A5P05141 298 aaKnown RBP11.31□□□□□ -0.6
UBE3A-209ENST00000625778 LOXL3P58215 753 aa11.31□□□□□ -0.6
UBE3A-209ENST00000625778 COX19Q49B96 90 aa11.31□□□□□ -0.6
UBE3A-209ENST00000625778 IGF2BP2-AS1Q96M15 143 aa11.31□□□□□ -0.6
UBE3A-209ENST00000625778 MGST3O14880 152 aa11.3□□□□□ -0.6
UBE3A-209ENST00000625778 OR4F17Q8NGA8 305 aa11.3□□□□□ -0.6
UBE3A-209ENST00000625778 OR2V2Q96R30 315 aa11.3□□□□□ -0.6
UBE3A-209ENST00000625778 SLC25A10Q9UBX3 287 aaPredicted RBP11.3□□□□□ -0.6
UBE3A-209ENST00000625778 TRGV8A0A0C4DH27 118 aa11.3□□□□□ -0.6
UBE3A-209ENST00000625778 RBMXL3Q8N7X1 1067 aaKnown RBP11.3□□□□□ -0.6
UBE3A-209ENST00000625778 OR1B1Q8NGR6 318 aa11.3□□□□□ -0.6
UBE3A-209ENST00000625778 NPIPB3Q92617 1050 aa11.3□□□□□ -0.6
UBE3A-209ENST00000625778 TPPP3Q9BW30 176 aa11.3□□□□□ -0.6
UBE3A-209ENST00000625778 TMEM14BQ9NUH8 114 aa11.3□□□□□ -0.6
UBE3A-209ENST00000625778 INTS1Q8N201 2190 aaKnown RBP11.3□□□□□ -0.6
UBE3A-209ENST00000625778 PEX7O00628 323 aa11.3□□□□□ -0.6
UBE3A-209ENST00000625778 MMP23AO75900 390 aa11.3□□□□□ -0.6
UBE3A-209ENST00000625778 CNOT1A5YKK6 2376 aaKnown RBP11.29□□□□□ -0.6
UBE3A-209ENST00000625778 LEPROTL1O95214 131 aa11.29□□□□□ -0.6
UBE3A-209ENST00000625778 MOSP00540 346 aa11.29□□□□□ -0.6
UBE3A-209ENST00000625778 PRR7Q8TB68 274 aa11.29□□□□□ -0.6
UBE3A-209ENST00000625778 COMMD5Q9GZQ3 224 aa11.29□□□□□ -0.6
UBE3A-209ENST00000625778 TANC2Q9HCD6 1990 aa11.29□□□□□ -0.6
UBE3A-209ENST00000625778 C2orf70A6NJV1 201 aa11.29□□□□□ -0.6
UBE3A-209ENST00000625778 TM4SF20Q53R12 229 aa11.29□□□□□ -0.6
UBE3A-209ENST00000625778 GCSAMQ8N6F7 178 aa11.29□□□□□ -0.6
UBE3A-209ENST00000625778 SLC25A2Q9BXI2 301 aa11.29□□□□□ -0.6
UBE3A-209ENST00000625778 FOXA2Q9Y261 457 aaPredicted RBP11.29□□□□□ -0.6
UBE3A-209ENST00000625778 VWC2LB2RUY7 222 aa11.28□□□□□ -0.6
UBE3A-209ENST00000625778 TAX1BP3O14907 124 aa11.28□□□□□ -0.6
UBE3A-209ENST00000625778 FAM90A1Q86YD7 464 aa11.28□□□□□ -0.6
UBE3A-209ENST00000625778 TDHQ8IZJ6 230 aa11.28□□□□□ -0.6
UBE3A-209ENST00000625778 MUC15Q8N387 334 aa11.28□□□□□ -0.6
UBE3A-209ENST00000625778 TEX50A0A1B0GTY4 177 aa11.28□□□□□ -0.6
UBE3A-209ENST00000625778 A0A1W2PRE2 83 aa11.28□□□□□ -0.6
UBE3A-209ENST00000625778 PGPA6NDG6 321 aa11.28□□□□□ -0.6
UBE3A-209ENST00000625778 CEACAM3P40198 252 aa11.28□□□□□ -0.6
UBE3A-209ENST00000625778 C10orf113Q5VZT2 155 aa11.28□□□□□ -0.6
UBE3A-209ENST00000625778 INO80CQ6PI98 192 aaPredicted RBP11.28□□□□□ -0.6
UBE3A-209ENST00000625778 TMEM116Q8NCL8 245 aa11.28□□□□□ -0.6
UBE3A-209ENST00000625778 GRAMD2BQ96HH9 432 aa11.28□□□□□ -0.6
UBE3A-209ENST00000625778 CCL13Q99616 98 aa11.28□□□□□ -0.6
UBE3A-209ENST00000625778 MRPL27Q9P0M9 148 aaKnown RBP11.28□□□□□ -0.6
UBE3A-209ENST00000625778 PRNDQ9UKY0 176 aa11.28□□□□□ -0.6
UBE3A-209ENST00000625778 ZNF835Q9Y2P0 537 aa11.28□□□□□ -0.6
UBE3A-209ENST00000625778 EP300Q09472 2414 aaPredicted RBP11.28□□□□□ -0.6
UBE3A-209ENST00000625778 FAM90A9PA6NNJ1 464 aa11.28□□□□□ -0.6
UBE3A-209ENST00000625778 H0YJW9 148 aa11.28□□□□□ -0.6
UBE3A-209ENST00000625778 SAA1P0DJI8 122 aaPredicted RBP11.28□□□□□ -0.6
UBE3A-209ENST00000625778 SLC25A34Q6PIV7 304 aa11.28□□□□□ -0.6
UBE3A-209ENST00000625778 ITLN1Q8WWA0 313 aa11.28□□□□□ -0.6
UBE3A-209ENST00000625778 SPENQ96T58 3664 aaKnown RBP11.27□□□□□ -0.6
UBE3A-209ENST00000625778 KIR2DS2P43631 304 aa11.27□□□□□ -0.61
UBE3A-209ENST00000625778 TMEM164Q5U3C3 297 aa11.27□□□□□ -0.61
UBE3A-209ENST00000625778 FER1L6-AS1Q8NA97 138 aa11.27□□□□□ -0.61
UBE3A-209ENST00000625778 DMXL2Q8TDJ6 3036 aa11.27□□□□□ -0.61
UBE3A-209ENST00000625778 H3BUT2 72 aa11.27□□□□□ -0.61
UBE3A-209ENST00000625778 CHEK1O14757 476 aa11.27□□□□□ -0.61
UBE3A-209ENST00000625778 TMEM177Q53S58 311 aa11.27□□□□□ -0.61
UBE3A-209ENST00000625778 FAM216BQ8N7L0 139 aa11.27□□□□□ -0.61
UBE3A-209ENST00000625778 DDB2Q92466 427 aa11.27□□□□□ -0.61
UBE3A-209ENST00000625778 HARBI1Q96MB7 349 aa11.27□□□□□ -0.61
UBE3A-209ENST00000625778 LAMA5O15230 3695 aa11.27□□□□□ -0.61
UBE3A-209ENST00000625778 E7EUB6 86 aa11.26□□□□□ -0.61
UBE3A-209ENST00000625778 HIST1H1EP10412 219 aaKnown RBP11.26□□□□□ -0.61
UBE3A-209ENST00000625778 MSMPQ1L6U9 139 aa11.26□□□□□ -0.61
UBE3A-209ENST00000625778 PEAR1Q5VY43 1037 aaPredicted RBP11.26□□□□□ -0.61
UBE3A-209ENST00000625778 FLYWCH2Q96CP2 140 aaKnown RBP11.26□□□□□ -0.61
UBE3A-209ENST00000625778 DAZAP1Q96EP5 407 aaKnown RBP11.26□□□□□ -0.61
UBE3A-209ENST00000625778 PCNX1Q96RV3 2341 aa11.26□□□□□ -0.61
UBE3A-209ENST00000625778 IGHV1-24A0A0C4DH33 117 aa11.26□□□□□ -0.61
UBE3A-209ENST00000625778 M0R1B8 84 aa11.26□□□□□ -0.61
UBE3A-209ENST00000625778 PLP1P60201 277 aa11.26□□□□□ -0.61
UBE3A-209ENST00000625778 PRCDQ00LT1 54 aa11.26□□□□□ -0.61
UBE3A-209ENST00000625778 RTL8BQ17RB0 113 aa11.26□□□□□ -0.61
UBE3A-209ENST00000625778 TRAV8-1A0A0A6YYK1 113 aa11.26□□□□□ -0.61
UBE3A-209ENST00000625778 C17orf58Q2M2W7 97 aa11.26□□□□□ -0.61
UBE3A-209ENST00000625778 HCP5Q6MZN7 132 aa11.26□□□□□ -0.61
UBE3A-209ENST00000625778 LINC00305Q7Z4B0 112 aa11.26□□□□□ -0.61
UBE3A-209ENST00000625778 ZNF329Q86UD4 541 aa11.26□□□□□ -0.61
UBE3A-209ENST00000625778 FAM167A-AS1Q96KT0 104 aa11.26□□□□□ -0.61
UBE3A-209ENST00000625778 SYS1-DBNDD2H3BUS1 97 aa11.25□□□□□ -0.61
UBE3A-209ENST00000625778 UPK2O00526 184 aa11.25□□□□□ -0.61
UBE3A-209ENST00000625778 RNASE2P10153 161 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms