RNA–Protein interactions for RNA: ENST00000625402.1

SCARNA4-202, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 129 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-202ENST00000625402 TLNRD1Q9H1K6 362 aa0.74□□□□□ -2.29
SCARNA4-202ENST00000625402 MED9Q9NWA0 146 aa0.74□□□□□ -2.29
SCARNA4-202ENST00000625402 SOX21Q9Y651 276 aaPredicted RBP0.74□□□□□ -2.29
SCARNA4-202ENST00000625402 FCGBPQ9Y6R7 5405 aaPredicted RBP0.74□□□□□ -2.29
SCARNA4-202ENST00000625402 SNRNP200O75643 2136 aaKnown RBP0.73□□□□□ -2.29
SCARNA4-202ENST00000625402 IGKV2-40A0A087WW87 121 aaPredicted RBP0.73□□□□□ -2.29
SCARNA4-202ENST00000625402 TRAV3A0A0B4J244 114 aa0.73□□□□□ -2.29
SCARNA4-202ENST00000625402 IGKV1-9A0A0C4DH69 117 aa0.73□□□□□ -2.29
SCARNA4-202ENST00000625402 FAM159BA6NKW6 160 aa0.73□□□□□ -2.29
SCARNA4-202ENST00000625402 C1orf196B1AJZ1 125 aa0.73□□□□□ -2.29
SCARNA4-202ENST00000625402 TCL1BO95988 128 aa0.73□□□□□ -2.29
SCARNA4-202ENST00000625402 IGKV2D-40P01614 121 aaPredicted RBP0.73□□□□□ -2.29
SCARNA4-202ENST00000625402 C8GP07360 202 aa0.73□□□□□ -2.29
SCARNA4-202ENST00000625402 OR4E1P0C645 316 aa0.73□□□□□ -2.29
SCARNA4-202ENST00000625402 MGST1P10620 155 aaKnown RBP0.73□□□□□ -2.29
SCARNA4-202ENST00000625402 COX6A1P12074 109 aa0.73□□□□□ -2.29
SCARNA4-202ENST00000625402 CYBAP13498 195 aa0.73□□□□□ -2.29
SCARNA4-202ENST00000625402 MIFP14174 115 aa0.73□□□□□ -2.29
SCARNA4-202ENST00000625402 PPIBP23284 216 aaKnown RBP0.73□□□□□ -2.29
SCARNA4-202ENST00000625402 CASP1P29466 404 aa0.73□□□□□ -2.29
SCARNA4-202ENST00000625402 HOXA6P31267 233 aa0.73□□□□□ -2.29
SCARNA4-202ENST00000625402 SSR2P43308 183 aa0.73□□□□□ -2.29
SCARNA4-202ENST00000625402 CAPZBP47756 277 aa0.73□□□□□ -2.29
SCARNA4-202ENST00000625402 REEP5Q00765 189 aa0.73□□□□□ -2.29
SCARNA4-202ENST00000625402 OR8D4Q8NGM9 314 aa0.73□□□□□ -2.29
SCARNA4-202ENST00000625402 STAG3L4Q8TBR4 150 aa0.73□□□□□ -2.29
SCARNA4-202ENST00000625402 C2orf50Q96LR7 162 aa0.73□□□□□ -2.29
SCARNA4-202ENST00000625402 TMEM133Q9H2Q1 129 aa0.73□□□□□ -2.29
SCARNA4-202ENST00000625402 OR5AC2Q9NZP5 309 aa0.73□□□□□ -2.29
SCARNA4-202ENST00000625402 CEP192Q8TEP8 1941 aa0.73□□□□□ -2.29
SCARNA4-202ENST00000625402 HEATR1Q9H583 2144 aaKnown RBP0.73□□□□□ -2.29
SCARNA4-202ENST00000625402 LYZL6O75951 148 aa0.72□□□□□ -2.29
SCARNA4-202ENST00000625402 UBL3O95164 117 aa0.72□□□□□ -2.29
SCARNA4-202ENST00000625402 CST2P09228 141 aa0.72□□□□□ -2.29
SCARNA4-202ENST00000625402 S100A4P26447 101 aaKnown RBP0.72□□□□□ -2.29
SCARNA4-202ENST00000625402 HSD11B1P28845 292 aa0.72□□□□□ -2.29
SCARNA4-202ENST00000625402 ZNF93P35789 620 aaPredicted RBP0.72□□□□□ -2.29
SCARNA4-202ENST00000625402 RAB4BP61018 213 aa0.72□□□□□ -2.29
SCARNA4-202ENST00000625402 PDE6HQ13956 83 aa0.72□□□□□ -2.29
SCARNA4-202ENST00000625402 DEFB113Q30KQ7 82 aa0.72□□□□□ -2.29
SCARNA4-202ENST00000625402 TEX36Q5VZQ5 186 aa0.72□□□□□ -2.29
SCARNA4-202ENST00000625402 PHF13Q86YI8 300 aaPredicted RBP0.72□□□□□ -2.29
SCARNA4-202ENST00000625402 Q8IYB0 196 aa0.72□□□□□ -2.29
SCARNA4-202ENST00000625402 LINC00471Q8N535 108 aa0.72□□□□□ -2.29
SCARNA4-202ENST00000625402 C3orf56Q8N813 242 aa0.72□□□□□ -2.29
SCARNA4-202ENST00000625402 OR11H6Q8NGC7 330 aa0.72□□□□□ -2.29
SCARNA4-202ENST00000625402 GPR146Q96CH1 333 aa0.72□□□□□ -2.29
SCARNA4-202ENST00000625402 MIXL1Q9H2W2 232 aa0.72□□□□□ -2.29
SCARNA4-202ENST00000625402 TRABDQ9H4I3 376 aa0.72□□□□□ -2.29
SCARNA4-202ENST00000625402 PARVBQ9HBI1 364 aa0.72□□□□□ -2.29
SCARNA4-202ENST00000625402 TVP23BQ9NYZ1 205 aa0.72□□□□□ -2.29
SCARNA4-202ENST00000625402 UTP11Q9Y3A2 253 aaKnown RBP0.72□□□□□ -2.29
SCARNA4-202ENST00000625402 ECM29Q5VYK3 1845 aa0.72□□□□□ -2.29
SCARNA4-202ENST00000625402 MYH7BA7E2Y1 1941 aa0.72□□□□□ -2.29
SCARNA4-202ENST00000625402 MYH10P35580 1976 aa0.71□□□□□ -2.3
SCARNA4-202ENST00000625402 A0A087X0T9 212 aa0.71□□□□□ -2.3
SCARNA4-202ENST00000625402 C19orf84I3L1E1 186 aa0.71□□□□□ -2.3
SCARNA4-202ENST00000625402 OR1I1O60431 355 aa0.71□□□□□ -2.3
SCARNA4-202ENST00000625402 ATP5HO75947 161 aa0.71□□□□□ -2.3
SCARNA4-202ENST00000625402 SERPINA1P01009 418 aa0.71□□□□□ -2.3
SCARNA4-202ENST00000625402 RNASE4P34096 147 aaKnown RBP0.71□□□□□ -2.3
SCARNA4-202ENST00000625402 TRAPPC6BQ86SZ2 158 aa0.71□□□□□ -2.3
SCARNA4-202ENST00000625402 C12orf29Q8N999 325 aa0.71□□□□□ -2.3
SCARNA4-202ENST00000625402 OR10X1Q8NGY0 326 aa0.71□□□□□ -2.3
SCARNA4-202ENST00000625402 C9orf16Q9BUW7 83 aa0.71□□□□□ -2.3
SCARNA4-202ENST00000625402 KIFC1Q9BW19 673 aa0.71□□□□□ -2.3
SCARNA4-202ENST00000625402 NMNAT1Q9HAN9 279 aaPredicted RBP0.71□□□□□ -2.3
SCARNA4-202ENST00000625402 TAS2R4Q9NYW5 299 aa0.71□□□□□ -2.3
SCARNA4-202ENST00000625402 EPDR1Q9UM22 224 aa0.71□□□□□ -2.3
SCARNA4-202ENST00000625402 RIC1Q4ADV7 1423 aa0.71□□□□□ -2.3
SCARNA4-202ENST00000625402 TNRC6BQ9UPQ9 1833 aaKnown RBP0.71□□□□□ -2.3
SCARNA4-202ENST00000625402 UNC13CQ8NB66 2214 aa0.7□□□□□ -2.3
SCARNA4-202ENST00000625402 MED12Q93074 2177 aa0.7□□□□□ -2.3
SCARNA4-202ENST00000625402 TRAV4A0A0B4J268 109 aa0.7□□□□□ -2.3
SCARNA4-202ENST00000625402 OR2B3O76000 313 aa0.7□□□□□ -2.3
SCARNA4-202ENST00000625402 BAALC-AS2P0C853 105 aa0.7□□□□□ -2.3
SCARNA4-202ENST00000625402 ARL14EPLP0DKL9 152 aa0.7□□□□□ -2.3
SCARNA4-202ENST00000625402 BRS3P32247 399 aa0.7□□□□□ -2.3
SCARNA4-202ENST00000625402 ATP5G3P48201 142 aa0.7□□□□□ -2.3
SCARNA4-202ENST00000625402 YPEL3P61236 119 aaPredicted RBP0.7□□□□□ -2.3
SCARNA4-202ENST00000625402 SPA17Q15506 151 aa0.7□□□□□ -2.3
SCARNA4-202ENST00000625402 TAF1AQ15573 450 aaPredicted RBP0.7□□□□□ -2.3
SCARNA4-202ENST00000625402 SPANXN5Q5MJ07 72 aa0.7□□□□□ -2.3
SCARNA4-202ENST00000625402 BRMS1LQ5PSV4 323 aa0.7□□□□□ -2.3
SCARNA4-202ENST00000625402 FAM19A2Q8N3H0 131 aa0.7□□□□□ -2.3
SCARNA4-202ENST00000625402 OR10J5Q8NHC4 309 aa0.7□□□□□ -2.3
SCARNA4-202ENST00000625402 RNF122Q9H9V4 155 aa0.7□□□□□ -2.3
SCARNA4-202ENST00000625402 FAM32AQ9Y421 112 aaKnown RBP0.7□□□□□ -2.3
SCARNA4-202ENST00000625402 DOCK4Q8N1I0 1966 aa0.7□□□□□ -2.3
SCARNA4-202ENST00000625402 PCF11O94913 1555 aaKnown RBP0.7□□□□□ -2.3
SCARNA4-202ENST00000625402 TRAV12-1A0A0B4J245 112 aa0.69□□□□□ -2.3
SCARNA4-202ENST00000625402 FUOMA2VDF0 154 aa0.69□□□□□ -2.3
SCARNA4-202ENST00000625402 CYB5BO43169 146 aa0.69□□□□□ -2.3
SCARNA4-202ENST00000625402 C1QBP02746 253 aa0.69□□□□□ -2.3
SCARNA4-202ENST00000625402 ERP29P30040 261 aaKnown RBP0.69□□□□□ -2.3
SCARNA4-202ENST00000625402 PIGPP57054 158 aa0.69□□□□□ -2.3
SCARNA4-202ENST00000625402 DYNLT1P63172 113 aa0.69□□□□□ -2.3
SCARNA4-202ENST00000625402 PLCXD2Q0VAA5 305 aa0.69□□□□□ -2.3
SCARNA4-202ENST00000625402 TSNQ15631 228 aaKnown RBP0.69□□□□□ -2.3
SCARNA4-202ENST00000625402 LIN52Q52LA3 116 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms