RNA–Protein interactions for RNA: ENST00000623266.1

PCDHB9-202, Transcript of protocadherin beta 9, humanhuman

TSL 4

Gene PCDHB9, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-202ENST00000623266 GLMPQ8WWB7 406 aa6.58□□□□□ -1.36
PCDHB9-202ENST00000623266 SCRT1Q9BWW7 348 aa6.58□□□□□ -1.36
PCDHB9-202ENST00000623266 TMEM222Q9H0R3 208 aa6.58□□□□□ -1.36
PCDHB9-202ENST00000623266 HRH4Q9H3N8 390 aa6.58□□□□□ -1.36
PCDHB9-202ENST00000623266 COPZ2Q9P299 210 aa6.58□□□□□ -1.36
PCDHB9-202ENST00000623266 TRAV30A0A087WSZ9 112 aa6.57□□□□□ -1.36
PCDHB9-202ENST00000623266 RAB3DO95716 219 aa6.57□□□□□ -1.36
PCDHB9-202ENST00000623266 HTR2BP41595 481 aa6.57□□□□□ -1.36
PCDHB9-202ENST00000623266 YPEL3P61236 119 aaPredicted RBP6.57□□□□□ -1.36
PCDHB9-202ENST00000623266 USF2Q15853 346 aaPredicted RBP6.57□□□□□ -1.36
PCDHB9-202ENST00000623266 C12orf74Q32Q52 190 aa6.57□□□□□ -1.36
PCDHB9-202ENST00000623266 SCGB2B2Q4G0G5 96 aa6.57□□□□□ -1.36
PCDHB9-202ENST00000623266 C2orf83Q53S99 150 aa6.57□□□□□ -1.36
PCDHB9-202ENST00000623266 ACTL10Q5JWF8 245 aa6.57□□□□□ -1.36
PCDHB9-202ENST00000623266 FAAP20Q6NZ36 180 aa6.57□□□□□ -1.36
PCDHB9-202ENST00000623266 MORN3Q6PF18 240 aaPredicted RBP6.57□□□□□ -1.36
PCDHB9-202ENST00000623266 Q6ZTC4 211 aa6.57□□□□□ -1.36
PCDHB9-202ENST00000623266 Q8WTZ3 238 aa6.57□□□□□ -1.36
PCDHB9-202ENST00000623266 RRNAD1Q96FB5 475 aaKnown RBP6.57□□□□□ -1.36
PCDHB9-202ENST00000623266 METTL26Q96S19 204 aa6.57□□□□□ -1.36
PCDHB9-202ENST00000623266 TMEM231Q9H6L2 316 aa6.57□□□□□ -1.36
PCDHB9-202ENST00000623266 VCX3AQ9NNX9 186 aa6.57□□□□□ -1.36
PCDHB9-202ENST00000623266 HEYLQ9NQ87 328 aaPredicted RBP6.57□□□□□ -1.36
PCDHB9-202ENST00000623266 C11orf94C9JXX5 98 aa6.56□□□□□ -1.36
PCDHB9-202ENST00000623266 GABARAPH6UMI1 98 aa6.56□□□□□ -1.36
PCDHB9-202ENST00000623266 BUB3O43684 328 aa6.56□□□□□ -1.36
PCDHB9-202ENST00000623266 ATG12O94817 140 aa6.56□□□□□ -1.36
PCDHB9-202ENST00000623266 GABARAPO95166 117 aa6.56□□□□□ -1.36
PCDHB9-202ENST00000623266 SMIM18P0DKX4 95 aa6.56□□□□□ -1.36
PCDHB9-202ENST00000623266 SPP1P10451 314 aa6.56□□□□□ -1.36
PCDHB9-202ENST00000623266 MIFP14174 115 aa6.56□□□□□ -1.36
PCDHB9-202ENST00000623266 TBPP20226 339 aa6.56□□□□□ -1.36
PCDHB9-202ENST00000623266 HOXA1P49639 335 aaPredicted RBP6.56□□□□□ -1.36
PCDHB9-202ENST00000623266 RND2P52198 227 aa6.56□□□□□ -1.36
PCDHB9-202ENST00000623266 TAS2R19P59542 299 aa6.56□□□□□ -1.36
PCDHB9-202ENST00000623266 DHRS2Q13268 280 aa6.56□□□□□ -1.36
PCDHB9-202ENST00000623266 GPR107Q5VW38 600 aa6.56□□□□□ -1.36
PCDHB9-202ENST00000623266 GSG1LQ6UXU4 331 aa6.56□□□□□ -1.36
PCDHB9-202ENST00000623266 ZNF767PQ75MW2 155 aa6.56□□□□□ -1.36
PCDHB9-202ENST00000623266 FAM219AQ8IW50 185 aa6.56□□□□□ -1.36
PCDHB9-202ENST00000623266 CCDC71LQ8N9Z2 235 aa6.56□□□□□ -1.36
PCDHB9-202ENST00000623266 NPIPB3Q92617 1050 aa6.56□□□□□ -1.36
PCDHB9-202ENST00000623266 PDCD10Q9BUL8 212 aa6.56□□□□□ -1.36
PCDHB9-202ENST00000623266 NAA60Q9H7X0 242 aa6.56□□□□□ -1.36
PCDHB9-202ENST00000623266 ENY2Q9NPA8 101 aa6.56□□□□□ -1.36
PCDHB9-202ENST00000623266 CACNG5Q9UF02 275 aa6.56□□□□□ -1.36
PCDHB9-202ENST00000623266 CELA1Q9UNI1 258 aa6.56□□□□□ -1.36
PCDHB9-202ENST00000623266 TMEM56-RWDD3S4R434 201 aa6.56□□□□□ -1.36
PCDHB9-202ENST00000623266 PKHD1P08F94 4074 aa6.56□□□□□ -1.36
PCDHB9-202ENST00000623266 DNAH11Q96DT5 4516 aa6.55□□□□□ -1.36
PCDHB9-202ENST00000623266 CRYM-AS1A6NIL9 109 aa6.55□□□□□ -1.36
PCDHB9-202ENST00000623266 H3BMM0 161 aa6.55□□□□□ -1.36
PCDHB9-202ENST00000623266 B3GALNT1O75752 331 aa6.55□□□□□ -1.36
PCDHB9-202ENST00000623266 HNRNPCP07910 306 aaKnown RBP eCLIP6.55□□□□□ -1.36
PCDHB9-202ENST00000623266 PSG1P11464 419 aa6.55□□□□□ -1.36
PCDHB9-202ENST00000623266 OR10J1P30954 320 aa6.55□□□□□ -1.36
PCDHB9-202ENST00000623266 AP2S1P53680 142 aaPredicted RBP6.55□□□□□ -1.36
PCDHB9-202ENST00000623266 DEFB1P60022 68 aa6.55□□□□□ -1.36
PCDHB9-202ENST00000623266 TMEM41BQ5BJD5 291 aa6.55□□□□□ -1.36
PCDHB9-202ENST00000623266 NMSQ5H8A3 153 aa6.55□□□□□ -1.36
PCDHB9-202ENST00000623266 GDF5OSQ5U4N7 250 aa6.55□□□□□ -1.36
PCDHB9-202ENST00000623266 TMEM268Q5VZI3 342 aa6.55□□□□□ -1.36
PCDHB9-202ENST00000623266 OR1S2Q8NGQ3 325 aa6.55□□□□□ -1.36
PCDHB9-202ENST00000623266 RNASEH2CQ8TDP1 164 aaKnown RBP6.55□□□□□ -1.36
PCDHB9-202ENST00000623266 RBPMSQ93062 196 aaKnown RBP6.55□□□□□ -1.36
PCDHB9-202ENST00000623266 PRR13Q9NZ81 148 aa6.55□□□□□ -1.36
PCDHB9-202ENST00000623266 TBC1D24Q9ULP9 559 aa6.55□□□□□ -1.36
PCDHB9-202ENST00000623266 IGHV4-4A0A075B6R2 117 aa6.54□□□□□ -1.36
PCDHB9-202ENST00000623266 IGKV1D-37A0A075B6S9 117 aa6.54□□□□□ -1.36
PCDHB9-202ENST00000623266 TRAV10A0A0B4J240 114 aa6.54□□□□□ -1.36
PCDHB9-202ENST00000623266 A0A1B0GVY2 172 aa6.54□□□□□ -1.36
PCDHB9-202ENST00000623266 HELTA6NFD8 242 aa6.54□□□□□ -1.36
PCDHB9-202ENST00000623266 FAM90A26D6RGX4 464 aa6.54□□□□□ -1.36
PCDHB9-202ENST00000623266 SLC25A4P12235 298 aa6.54□□□□□ -1.36
PCDHB9-202ENST00000623266 ALDH3B2P48448 385 aa6.54□□□□□ -1.36
PCDHB9-202ENST00000623266 SUPT4H1P63272 117 aaKnown RBP6.54□□□□□ -1.36
PCDHB9-202ENST00000623266 SSBP1Q04837 148 aaKnown RBP6.54□□□□□ -1.36
PCDHB9-202ENST00000623266 SPCS2Q15005 226 aa6.54□□□□□ -1.36
PCDHB9-202ENST00000623266 PSMG4Q5JS54 123 aa6.54□□□□□ -1.36
PCDHB9-202ENST00000623266 OR4C16Q8NGL9 310 aa6.54□□□□□ -1.36
PCDHB9-202ENST00000623266 C15orf40Q8WUR7 153 aa6.54□□□□□ -1.36
PCDHB9-202ENST00000623266 AP3S1Q92572 193 aa6.54□□□□□ -1.36
PCDHB9-202ENST00000623266 SOSTQ9BQB4 213 aa6.54□□□□□ -1.36
PCDHB9-202ENST00000623266 SEPSECSQ9HD40 501 aaKnown RBP6.54□□□□□ -1.36
PCDHB9-202ENST00000623266 PLA2G2EQ9NZK7 142 aa6.54□□□□□ -1.36
PCDHB9-202ENST00000623266 XCL2Q9UBD3 114 aa6.54□□□□□ -1.36
PCDHB9-202ENST00000623266 PCLOQ9Y6V0 5065 aa6.54□□□□□ -1.36
PCDHB9-202ENST00000623266 RPS10-NUDT3A0A1W2PQS6 291 aa6.53□□□□□ -1.36
PCDHB9-202ENST00000623266 CEBPZOSA8MTT3 80 aa6.53□□□□□ -1.36
PCDHB9-202ENST00000623266 CTDSPLO15194 276 aa6.53□□□□□ -1.36
PCDHB9-202ENST00000623266 TOMM40O96008 361 aa6.53□□□□□ -1.36
PCDHB9-202ENST00000623266 IL4P05112 153 aa6.53□□□□□ -1.36
PCDHB9-202ENST00000623266 RD3LP0DJH9 198 aa6.53□□□□□ -1.36
PCDHB9-202ENST00000623266 ZNF90Q03938 601 aa6.53□□□□□ -1.36
PCDHB9-202ENST00000623266 SURF2Q15527 256 aaPredicted RBP6.53□□□□□ -1.36
PCDHB9-202ENST00000623266 LYZL2Q7Z4W2 148 aa6.53□□□□□ -1.36
PCDHB9-202ENST00000623266 SLC24A4Q8NFF2 622 aa6.53□□□□□ -1.36
PCDHB9-202ENST00000623266 OR51S1Q8NGJ8 323 aa6.53□□□□□ -1.36
PCDHB9-202ENST00000623266 OR51G1Q8NGK1 321 aa6.53□□□□□ -1.36
PCDHB9-202ENST00000623266 RNASE11Q8TAA1 199 aaKnown RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms