RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 TRBV24-1A0A075B6N3 115 aa13.32□□□□□ -0.28
GABRB3-215ENST00000622697 LINC01551Q86U37 167 aa13.32□□□□□ -0.28
GABRB3-215ENST00000622697 RPUSD1Q9UJJ7 312 aaKnown RBP13.32□□□□□ -0.28
GABRB3-215ENST00000622697 TRAV1-1A0A0B4J248 108 aa13.31□□□□□ -0.28
GABRB3-215ENST00000622697 WIPF3A6NGB9 483 aa13.31□□□□□ -0.28
GABRB3-215ENST00000622697 AGMATQ9BSE5 352 aa13.31□□□□□ -0.28
GABRB3-215ENST00000622697 IGHV3-11P01762 117 aa13.31□□□□□ -0.28
GABRB3-215ENST00000622697 MLANAQ16655 118 aa13.31□□□□□ -0.28
GABRB3-215ENST00000622697 FAM106AQ4KMX7 169 aa13.31□□□□□ -0.28
GABRB3-215ENST00000622697 ASCL4Q6XD76 172 aa13.31□□□□□ -0.28
GABRB3-215ENST00000622697 C9JCJ5 164 aa13.31□□□□□ -0.28
GABRB3-215ENST00000622697 SLC25A15Q9Y619 301 aa13.31□□□□□ -0.28
GABRB3-215ENST00000622697 NBR2O15453 112 aa13.31□□□□□ -0.28
GABRB3-215ENST00000622697 GZMBP10144 247 aa13.31□□□□□ -0.28
GABRB3-215ENST00000622697 JOSD1Q15040 202 aaPredicted RBP13.31□□□□□ -0.28
GABRB3-215ENST00000622697 TMEM200BQ69YZ2 307 aa13.31□□□□□ -0.28
GABRB3-215ENST00000622697 IGKV1D-17A0A075B6S4 117 aa13.3□□□□□ -0.28
GABRB3-215ENST00000622697 TIMM23O14925 209 aa13.3□□□□□ -0.28
GABRB3-215ENST00000622697 ZNF585BQ52M93 769 aa13.3□□□□□ -0.28
GABRB3-215ENST00000622697 LY6G6EA0A0G2JKS1 128 aa13.3□□□□□ -0.28
GABRB3-215ENST00000622697 A0A1B0GW64 132 aa13.3□□□□□ -0.28
GABRB3-215ENST00000622697 A0A1W2PRE2 83 aa13.3□□□□□ -0.28
GABRB3-215ENST00000622697 RNASE6Q93091 150 aaKnown RBP13.3□□□□□ -0.28
GABRB3-215ENST00000622697 ZNRD1Q9P1U0 126 aa13.3□□□□□ -0.28
GABRB3-215ENST00000622697 U3KQA8 63 aa13.3□□□□□ -0.28
GABRB3-215ENST00000622697 SPSB3Q6PJ21 355 aa13.3□□□□□ -0.28
GABRB3-215ENST00000622697 PPIFP30405 207 aaKnown RBP13.3□□□□□ -0.28
GABRB3-215ENST00000622697 RSPO1Q2MKA7 263 aaPredicted RBP13.3□□□□□ -0.28
GABRB3-215ENST00000622697 TMEM256Q8N2U0 113 aa13.3□□□□□ -0.28
GABRB3-215ENST00000622697 OSTCQ9NRP0 149 aa13.3□□□□□ -0.28
GABRB3-215ENST00000622697 SELENOKQ9Y6D0 94 aa13.3□□□□□ -0.28
GABRB3-215ENST00000622697 PDLIM4P50479 330 aa13.29□□□□□ -0.28
GABRB3-215ENST00000622697 PET117Q6UWS5 81 aa13.29□□□□□ -0.28
GABRB3-215ENST00000622697 CCL19Q99731 98 aa13.29□□□□□ -0.28
GABRB3-215ENST00000622697 TMEM242Q9NWH2 141 aa13.29□□□□□ -0.28
GABRB3-215ENST00000622697 TRAV9-1A0A075B6T8 112 aa13.29□□□□□ -0.28
GABRB3-215ENST00000622697 PLP1P60201 277 aa13.29□□□□□ -0.28
GABRB3-215ENST00000622697 CD33P20138 364 aa13.29□□□□□ -0.28
GABRB3-215ENST00000622697 ZNF56Q15929 161 aa13.29□□□□□ -0.28
GABRB3-215ENST00000622697 NDUFAF3Q9BU61 184 aa13.29□□□□□ -0.28
GABRB3-215ENST00000622697 ZNF503-AS2A6NEH8 195 aa13.29□□□□□ -0.28
GABRB3-215ENST00000622697 PYY3Q5JQD4 70 aa13.29□□□□□ -0.28
GABRB3-215ENST00000622697 RNF125Q96EQ8 232 aa13.29□□□□□ -0.28
GABRB3-215ENST00000622697 MIEN1Q9BRT3 115 aa13.29□□□□□ -0.28
GABRB3-215ENST00000622697 C15orf62A8K5M9 175 aa13.29□□□□□ -0.28
GABRB3-215ENST00000622697 PRDM13Q9H4Q3 707 aa13.29□□□□□ -0.28
GABRB3-215ENST00000622697 CRIM1Q9NZV1 1036 aa13.29□□□□□ -0.28
GABRB3-215ENST00000622697 DENND4CQ5VZ89 1909 aa13.29□□□□□ -0.28
GABRB3-215ENST00000622697 TMEM50AO95807 157 aa13.28□□□□□ -0.28
GABRB3-215ENST00000622697 SYT8Q8NBV8 401 aa13.28□□□□□ -0.28
GABRB3-215ENST00000622697 OTORQ9NRC9 128 aa13.28□□□□□ -0.28
GABRB3-215ENST00000622697 FRMPD3Q5JV73 1810 aa13.28□□□□□ -0.28
GABRB3-215ENST00000622697 SPTAN1Q13813 2472 aaKnown RBP13.28□□□□□ -0.28
GABRB3-215ENST00000622697 TRBV6-6A0A0A6YYG2 114 aa13.28□□□□□ -0.28
GABRB3-215ENST00000622697 A1L4Q6 167 aa13.28□□□□□ -0.28
GABRB3-215ENST00000622697 FAM90A9PA6NNJ1 464 aa13.28□□□□□ -0.28
GABRB3-215ENST00000622697 RAB9AP51151 201 aa13.28□□□□□ -0.28
GABRB3-215ENST00000622697 FER1L6-AS1Q8NA97 138 aa13.28□□□□□ -0.28
GABRB3-215ENST00000622697 PRSS2P07478 247 aa13.28□□□□□ -0.28
GABRB3-215ENST00000622697 GLMPQ8WWB7 406 aa13.28□□□□□ -0.28
GABRB3-215ENST00000622697 FAM159AQ6UWV7 190 aa13.27□□□□□ -0.28
GABRB3-215ENST00000622697 LINC00527Q9UJ94 153 aa13.27□□□□□ -0.28
GABRB3-215ENST00000622697 RAXQ9Y2V3 346 aa13.27□□□□□ -0.28
GABRB3-215ENST00000622697 COX6B1P14854 86 aa13.27□□□□□ -0.28
GABRB3-215ENST00000622697 FAM90A2PQ658T7 463 aa13.27□□□□□ -0.28
GABRB3-215ENST00000622697 NUDT10Q8NFP7 164 aa13.27□□□□□ -0.28
GABRB3-215ENST00000622697 NUDT11Q96G61 164 aa13.27□□□□□ -0.28
GABRB3-215ENST00000622697 ETV2O00321 342 aaPredicted RBP13.27□□□□□ -0.29
GABRB3-215ENST00000622697 EXOC3-AS1Q8N2X6 119 aa13.27□□□□□ -0.29
GABRB3-215ENST00000622697 HAX1O00165 279 aa13.26□□□□□ -0.29
GABRB3-215ENST00000622697 FOXC2Q99958 501 aa13.26□□□□□ -0.29
GABRB3-215ENST00000622697 CIARTQ8N365 385 aaPredicted RBP13.26□□□□□ -0.29
GABRB3-215ENST00000622697 NEU4Q8WWR8 484 aaPredicted RBP13.26□□□□□ -0.29
GABRB3-215ENST00000622697 SNCGO76070 127 aa13.26□□□□□ -0.29
GABRB3-215ENST00000622697 IGKV1-16P04430 117 aa13.26□□□□□ -0.29
GABRB3-215ENST00000622697 KLF17Q5JT82 389 aaPredicted RBP13.26□□□□□ -0.29
GABRB3-215ENST00000622697 Q6ZS49 121 aa13.26□□□□□ -0.29
GABRB3-215ENST00000622697 CYYR1Q96J86 154 aa13.26□□□□□ -0.29
GABRB3-215ENST00000622697 FAM71F2Q6NXP2 309 aa13.26□□□□□ -0.29
GABRB3-215ENST00000622697 GNB1LQ9BYB4 327 aa13.26□□□□□ -0.29
GABRB3-215ENST00000622697 ORMDL3Q8N138 153 aa13.25□□□□□ -0.29
GABRB3-215ENST00000622697 PSG8Q9UQ74 426 aa13.25□□□□□ -0.29
GABRB3-215ENST00000622697 KLRD1Q13241 179 aa13.25□□□□□ -0.29
GABRB3-215ENST00000622697 DDB2Q92466 427 aa13.25□□□□□ -0.29
GABRB3-215ENST00000622697 GAFA1Q96PS6 74 aa13.25□□□□□ -0.29
GABRB3-215ENST00000622697 SCRT1Q9BWW7 348 aa13.25□□□□□ -0.29
GABRB3-215ENST00000622697 LAMTOR2Q9Y2Q5 125 aa13.25□□□□□ -0.29
GABRB3-215ENST00000622697 IGHV2-26A0A0B4J1V2 119 aa13.25□□□□□ -0.29
GABRB3-215ENST00000622697 A6NNC1 897 aa13.24□□□□□ -0.29
GABRB3-215ENST00000622697 COLCA1Q6ZS62 124 aa13.24□□□□□ -0.29
GABRB3-215ENST00000622697 NIT1Q86X76 327 aa13.24□□□□□ -0.29
GABRB3-215ENST00000622697 PMS2P5A8MQ11 134 aa13.24□□□□□ -0.29
GABRB3-215ENST00000622697 ZNF474Q6S9Z5 364 aaPredicted RBP13.24□□□□□ -0.29
GABRB3-215ENST00000622697 SPACA3Q8IXA5 215 aa13.24□□□□□ -0.29
GABRB3-215ENST00000622697 ASCL2Q99929 193 aa13.24□□□□□ -0.29
GABRB3-215ENST00000622697 ANAPC10Q9UM13 185 aa13.24□□□□□ -0.29
GABRB3-215ENST00000622697 CENPVQ7Z7K6 275 aaPredicted RBP13.24□□□□□ -0.29
GABRB3-215ENST00000622697 DUX5Q96PT3 197 aa13.24□□□□□ -0.29
GABRB3-215ENST00000622697 IGHV1-8P0DP01 117 aa13.24□□□□□ -0.29
GABRB3-215ENST00000622697 RNASE4P34096 147 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms