RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 TEX50A0A1B0GTY4 177 aa7.59□□□□□ -1.19
GGA3-223ENST00000621870 NPIPB6E9PJ23 425 aa7.59□□□□□ -1.19
GGA3-223ENST00000621870 APCSP02743 223 aa7.59□□□□□ -1.19
GGA3-223ENST00000621870 DANCRP0C864 163 aa7.59□□□□□ -1.19
GGA3-223ENST00000621870 RPL29P47914 159 aaKnown RBP7.59□□□□□ -1.19
GGA3-223ENST00000621870 PRRC2AP48634 2157 aaKnown RBP7.59□□□□□ -1.19
GGA3-223ENST00000621870 C5orf64Q2M2E5 130 aa7.59□□□□□ -1.19
GGA3-223ENST00000621870 CR1LQ2VPA4 569 aa7.59□□□□□ -1.19
GGA3-223ENST00000621870 Q6P435 159 aa7.59□□□□□ -1.19
GGA3-223ENST00000621870 VAMP8Q9BV40 100 aa7.59□□□□□ -1.19
GGA3-223ENST00000621870 GGACTQ9BVM4 153 aa7.59□□□□□ -1.19
GGA3-223ENST00000621870 KIF26AQ9ULI4 1882 aaPredicted RBP7.59□□□□□ -1.19
GGA3-223ENST00000621870 PRRC2CQ9Y520 2896 aaKnown RBP7.59□□□□□ -1.19
GGA3-223ENST00000621870 TRAV14DV4A0A0A6YYC5 116 aa7.59□□□□□ -1.19
GGA3-223ENST00000621870 GGCTO75223 188 aaKnown RBP7.59□□□□□ -1.19
GGA3-223ENST00000621870 BTF3P20290 206 aaKnown RBP7.59□□□□□ -1.19
GGA3-223ENST00000621870 PRCDQ00LT1 54 aa7.59□□□□□ -1.19
GGA3-223ENST00000621870 C3orf36Q3SXR2 165 aa7.59□□□□□ -1.19
GGA3-223ENST00000621870 ZNF585BQ52M93 769 aa7.59□□□□□ -1.19
GGA3-223ENST00000621870 RUSC1-AS1Q66K80 236 aa7.59□□□□□ -1.19
GGA3-223ENST00000621870 ATRAIDQ6UW56 229 aa7.59□□□□□ -1.19
GGA3-223ENST00000621870 DENND4CQ5VZ89 1909 aa7.59□□□□□ -1.19
GGA3-223ENST00000621870 A8MXK9 166 aa7.59□□□□□ -1.19
GGA3-223ENST00000621870 M0R1W7 72 aa7.59□□□□□ -1.19
GGA3-223ENST00000621870 NDUFS8O00217 210 aa7.59□□□□□ -1.19
GGA3-223ENST00000621870 SOD3P08294 240 aa7.59□□□□□ -1.19
GGA3-223ENST00000621870 CD99P14209 185 aa7.59□□□□□ -1.19
GGA3-223ENST00000621870 ZNF56Q15929 161 aa7.59□□□□□ -1.19
GGA3-223ENST00000621870 SAPCD1Q5SSQ6 148 aa7.59□□□□□ -1.19
GGA3-223ENST00000621870 SCGB1D4Q6XE38 83 aa7.59□□□□□ -1.19
GGA3-223ENST00000621870 MIR17HGQ75NE6 70 aa7.59□□□□□ -1.19
GGA3-223ENST00000621870 MYLKQ15746 1914 aa7.58□□□□□ -1.2
GGA3-223ENST00000621870 OOSP1A8MZH6 123 aa7.58□□□□□ -1.2
GGA3-223ENST00000621870 HLA-DRB1P01911 266 aa7.58□□□□□ -1.2
GGA3-223ENST00000621870 ID3Q02535 119 aa7.58□□□□□ -1.2
GGA3-223ENST00000621870 PAX8Q06710 450 aa7.58□□□□□ -1.2
GGA3-223ENST00000621870 KIAA1644Q3SXP7 199 aa7.58□□□□□ -1.2
GGA3-223ENST00000621870 PUSL1Q8N0Z8 303 aaKnown RBP7.58□□□□□ -1.2
GGA3-223ENST00000621870 NACAE9PAV3 2078 aa7.58□□□□□ -1.2
GGA3-223ENST00000621870 ADAMTS9Q9P2N4 1935 aa7.58□□□□□ -1.2
GGA3-223ENST00000621870 BUB1B-PAK6H3BSN5 160 aa7.58□□□□□ -1.2
GGA3-223ENST00000621870 CENPWQ5EE01 88 aa7.58□□□□□ -1.2
GGA3-223ENST00000621870 SLC25A48Q6ZT89 311 aaKnown RBP7.58□□□□□ -1.2
GGA3-223ENST00000621870 MYOZ3Q8TDC0 251 aa7.58□□□□□ -1.2
GGA3-223ENST00000621870 KLK15Q9H2R5 256 aa7.58□□□□□ -1.2
GGA3-223ENST00000621870 LDLRAD4O15165 306 aa7.58□□□□□ -1.2
GGA3-223ENST00000621870 ZNF343Q6P1L6 599 aa7.58□□□□□ -1.2
GGA3-223ENST00000621870 LHFPL4Q7Z7J7 247 aa7.58□□□□□ -1.2
GGA3-223ENST00000621870 TRAV3A0A0B4J244 114 aa7.57□□□□□ -1.2
GGA3-223ENST00000621870 LINC00473A8K010 186 aa7.57□□□□□ -1.2
GGA3-223ENST00000621870 E9PQ18 207 aa7.57□□□□□ -1.2
GGA3-223ENST00000621870 SAP30O75446 220 aa7.57□□□□□ -1.2
GGA3-223ENST00000621870 RELBQ01201 579 aa7.57□□□□□ -1.2
GGA3-223ENST00000621870 FAM53AQ6NSI3 398 aaPredicted RBP7.57□□□□□ -1.2
GGA3-223ENST00000621870 ZNF383Q8NA42 475 aa7.57□□□□□ -1.2
GGA3-223ENST00000621870 WFDC12Q8WWY7 111 aa7.57□□□□□ -1.2
GGA3-223ENST00000621870 DUX3Q96PT4 197 aa7.57□□□□□ -1.2
GGA3-223ENST00000621870 LINC01587Q99440 93 aa7.57□□□□□ -1.2
GGA3-223ENST00000621870 GRIFINA4D1Z8 144 aa7.57□□□□□ -1.2
GGA3-223ENST00000621870 GCGP01275 180 aa7.57□□□□□ -1.2
GGA3-223ENST00000621870 GPX4P36969 197 aaPredicted RBP7.57□□□□□ -1.2
GGA3-223ENST00000621870 DUX4L9Q6RFH8 374 aaPredicted RBP7.57□□□□□ -1.2
GGA3-223ENST00000621870 BET1LQ9NYM9 111 aa7.57□□□□□ -1.2
GGA3-223ENST00000621870 H0YIZ8 118 aa7.57□□□□□ -1.2
GGA3-223ENST00000621870 IGKV1-16P04430 117 aa7.57□□□□□ -1.2
GGA3-223ENST00000621870 CCKARP32238 428 aa7.57□□□□□ -1.2
GGA3-223ENST00000621870 TCTAP57738 103 aa7.57□□□□□ -1.2
GGA3-223ENST00000621870 IGF2-ASQ6U949 168 aa7.57□□□□□ -1.2
GGA3-223ENST00000621870 CRXO43186 299 aaPredicted RBP7.56□□□□□ -1.2
GGA3-223ENST00000621870 PYYP10082 97 aa7.56□□□□□ -1.2
GGA3-223ENST00000621870 ELOBQ15370 118 aa7.56□□□□□ -1.2
GGA3-223ENST00000621870 DEFB121Q5J5C9 76 aa7.56□□□□□ -1.2
GGA3-223ENST00000621870 IGFL2Q6UWQ7 119 aa7.56□□□□□ -1.2
GGA3-223ENST00000621870 LCNL1Q6ZST4 164 aa7.56□□□□□ -1.2
GGA3-223ENST00000621870 STHQ8IWL8 128 aa7.56□□□□□ -1.2
GGA3-223ENST00000621870 TMEM191AQ9H0A3 160 aa7.56□□□□□ -1.2
GGA3-223ENST00000621870 TRGV2A0A075B6R0 118 aa7.56□□□□□ -1.2
GGA3-223ENST00000621870 RNF222A6NCQ9 220 aa7.56□□□□□ -1.2
GGA3-223ENST00000621870 HNRNPA3P51991 378 aaKnown RBP7.56□□□□□ -1.2
GGA3-223ENST00000621870 IQCJQ1A5X6 159 aa7.56□□□□□ -1.2
GGA3-223ENST00000621870 LHFPL1Q86WI0 220 aa7.56□□□□□ -1.2
GGA3-223ENST00000621870 PIP4P2Q8N4L2 257 aa7.56□□□□□ -1.2
GGA3-223ENST00000621870 KLHL30-AS1Q8NEE0 82 aa7.56□□□□□ -1.2
GGA3-223ENST00000621870 ZNF502Q8TBZ5 544 aa7.56□□□□□ -1.2
GGA3-223ENST00000621870 HIST1H2BAQ96A08 127 aa7.56□□□□□ -1.2
GGA3-223ENST00000621870 GPR82Q96P67 336 aa7.56□□□□□ -1.2
GGA3-223ENST00000621870 NUP210Q8TEM1 1887 aaPredicted RBP7.56□□□□□ -1.2
GGA3-223ENST00000621870 CBY3A6NI87 242 aa7.56□□□□□ -1.2
GGA3-223ENST00000621870 UBE2L6O14933 153 aa7.56□□□□□ -1.2
GGA3-223ENST00000621870 SNCGO76070 127 aa7.56□□□□□ -1.2
GGA3-223ENST00000621870 WISP2O76076 250 aa7.56□□□□□ -1.2
GGA3-223ENST00000621870 TRGC1P0CF51 173 aa7.56□□□□□ -1.2
GGA3-223ENST00000621870 AGAP20933 346 aa7.56□□□□□ -1.2
GGA3-223ENST00000621870 ATP5G3P48201 142 aa7.56□□□□□ -1.2
GGA3-223ENST00000621870 RSPO1Q2MKA7 263 aaPredicted RBP7.56□□□□□ -1.2
GGA3-223ENST00000621870 DKK4Q9UBT3 224 aa7.56□□□□□ -1.2
GGA3-223ENST00000621870 SIGLEC9Q9Y336 463 aa7.56□□□□□ -1.2
GGA3-223ENST00000621870 ACANP16112 2415 aa7.56□□□□□ -1.2
GGA3-223ENST00000621870 H0YJW9 148 aa7.55□□□□□ -1.2
GGA3-223ENST00000621870 TMEM250H0YL14 139 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms