RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 RAB31Q13636 194 aa12.41□□□□□ -0.42
CBWD3-216ENST00000621396 TIGITQ495A1 244 aa12.41□□□□□ -0.42
CBWD3-216ENST00000621396 TMEM41BQ5BJD5 291 aa12.41□□□□□ -0.42
CBWD3-216ENST00000621396 UHRF2Q96PU4 802 aa12.41□□□□□ -0.42
CBWD3-216ENST00000621396 ZNF702PQ9H963 129 aa12.41□□□□□ -0.42
CBWD3-216ENST00000621396 TIMM9Q9Y5J7 89 aa12.41□□□□□ -0.42
CBWD3-216ENST00000621396 FNDC10F2Z333 226 aa12.4□□□□□ -0.42
CBWD3-216ENST00000621396 H2AFB1P0C5Y9 115 aa12.4□□□□□ -0.42
CBWD3-216ENST00000621396 PRR20EP86478 221 aa12.4□□□□□ -0.42
CBWD3-216ENST00000621396 PRR20CP86479 221 aa12.4□□□□□ -0.42
CBWD3-216ENST00000621396 PRR20DP86480 221 aa12.4□□□□□ -0.42
CBWD3-216ENST00000621396 PRR20BP86481 221 aa12.4□□□□□ -0.42
CBWD3-216ENST00000621396 PRR20AP86496 221 aa12.4□□□□□ -0.42
CBWD3-216ENST00000621396 Q56UQ5 140 aa12.4□□□□□ -0.42
CBWD3-216ENST00000621396 SPATA31B1PQ5VZV4 182 aa12.4□□□□□ -0.42
CBWD3-216ENST00000621396 CYP2G1PQ6ZSU1 146 aa12.4□□□□□ -0.42
CBWD3-216ENST00000621396 JMJD1CQ15652 2540 aa12.4□□□□□ -0.42
CBWD3-216ENST00000621396 IGLC1P0CG04 106 aa12.4□□□□□ -0.42
CBWD3-216ENST00000621396 TEX29Q8N6K0 151 aa12.4□□□□□ -0.42
CBWD3-216ENST00000621396 THYN1Q9P016 225 aa12.4□□□□□ -0.42
CBWD3-216ENST00000621396 TCRBV4S1A1TA0A5B7 111 aa12.39□□□□□ -0.43
CBWD3-216ENST00000621396 LINC00862A6NCI5 91 aa12.39□□□□□ -0.43
CBWD3-216ENST00000621396 IGKV1-17P01599 117 aa12.39□□□□□ -0.43
CBWD3-216ENST00000621396 IGHV3-11P01762 117 aa12.39□□□□□ -0.43
CBWD3-216ENST00000621396 TRGV3P03979 118 aa12.39□□□□□ -0.43
CBWD3-216ENST00000621396 PF4V1P10720 104 aa12.39□□□□□ -0.43
CBWD3-216ENST00000621396 M6PRP20645 277 aa12.39□□□□□ -0.43
CBWD3-216ENST00000621396 RPL29P47914 159 aaKnown RBP12.39□□□□□ -0.43
CBWD3-216ENST00000621396 TPPP2P59282 170 aa12.39□□□□□ -0.43
CBWD3-216ENST00000621396 OR1L6Q8NGR2 347 aa12.39□□□□□ -0.43
CBWD3-216ENST00000621396 OR4X1Q8NH49 305 aa12.39□□□□□ -0.43
CBWD3-216ENST00000621396 SAT2Q96F10 170 aaPredicted RBP12.39□□□□□ -0.43
CBWD3-216ENST00000621396 NPFFR1Q9GZQ6 430 aa12.39□□□□□ -0.43
CBWD3-216ENST00000621396 TMPRSS5Q9H3S3 457 aa12.39□□□□□ -0.43
CBWD3-216ENST00000621396 TMEM231Q9H6L2 316 aa12.39□□□□□ -0.43
CBWD3-216ENST00000621396 C21orf62Q9NYP8 219 aa12.39□□□□□ -0.43
CBWD3-216ENST00000621396 TRBV9A0A0B4J1U6 114 aa12.39□□□□□ -0.43
CBWD3-216ENST00000621396 GNG7O60262 68 aa12.39□□□□□ -0.43
CBWD3-216ENST00000621396 ORM2P19652 201 aa12.39□□□□□ -0.43
CBWD3-216ENST00000621396 RAB5CP51148 216 aa12.39□□□□□ -0.43
CBWD3-216ENST00000621396 MORN5Q5VZ52 161 aa12.39□□□□□ -0.43
CBWD3-216ENST00000621396 THAP8Q8NA92 274 aa12.39□□□□□ -0.43
CBWD3-216ENST00000621396 TMEM37Q8WXS4 190 aa12.39□□□□□ -0.43
CBWD3-216ENST00000621396 PRSS22Q9GZN4 317 aa12.39□□□□□ -0.43
CBWD3-216ENST00000621396 CLN5O75503 358 aa12.38□□□□□ -0.43
CBWD3-216ENST00000621396 CLEC3BP05452 202 aa12.38□□□□□ -0.43
CBWD3-216ENST00000621396 SNRPCP09234 159 aaKnown RBP12.38□□□□□ -0.43
CBWD3-216ENST00000621396 PSG1P11464 419 aa12.38□□□□□ -0.43
CBWD3-216ENST00000621396 GPR183P32249 361 aa12.38□□□□□ -0.43
CBWD3-216ENST00000621396 BLOC1S1P78537 153 aa12.38□□□□□ -0.43
CBWD3-216ENST00000621396 SPSB3Q6PJ21 355 aa12.38□□□□□ -0.43
CBWD3-216ENST00000621396 CLEC19AQ6UXS0 136 aa12.38□□□□□ -0.43
CBWD3-216ENST00000621396 RAB24Q969Q5 203 aa12.38□□□□□ -0.43
CBWD3-216ENST00000621396 OR5B12Q96R08 314 aa12.38□□□□□ -0.43
CBWD3-216ENST00000621396 CHRDL1Q9BU40 450 aa12.38□□□□□ -0.43
CBWD3-216ENST00000621396 MAST4O15021 2626 aa12.38□□□□□ -0.43
CBWD3-216ENST00000621396 IQCF2Q8IXL9 164 aa12.38□□□□□ -0.43
CBWD3-216ENST00000621396 LRRC20Q8TCA0 184 aa12.38□□□□□ -0.43
CBWD3-216ENST00000621396 PBDC1Q9BVG4 233 aa12.38□□□□□ -0.43
CBWD3-216ENST00000621396 CDC42EP3Q9UKI2 254 aa12.38□□□□□ -0.43
CBWD3-216ENST00000621396 CRIP2P52943 208 aaPredicted RBP12.37□□□□□ -0.43
CBWD3-216ENST00000621396 ACOT6Q3I5F7 207 aaPredicted RBP12.37□□□□□ -0.43
CBWD3-216ENST00000621396 FAM78BQ5VT40 261 aa12.37□□□□□ -0.43
CBWD3-216ENST00000621396 NECAP1Q8NC96 275 aa12.37□□□□□ -0.43
CBWD3-216ENST00000621396 OR1B1Q8NGR6 318 aa12.37□□□□□ -0.43
CBWD3-216ENST00000621396 CCDC140Q96MF4 163 aa12.37□□□□□ -0.43
CBWD3-216ENST00000621396 TMEM68Q96MH6 324 aa12.37□□□□□ -0.43
CBWD3-216ENST00000621396 PFDN2Q9UHV9 154 aa12.37□□□□□ -0.43
CBWD3-216ENST00000621396 MFAP4P55083 255 aa12.37□□□□□ -0.43
CBWD3-216ENST00000621396 A0A1W2PPV4 95 aa12.36□□□□□ -0.43
CBWD3-216ENST00000621396 PPP5D1E7EU14 171 aa12.36□□□□□ -0.43
CBWD3-216ENST00000621396 CYB5BO43169 146 aa12.36□□□□□ -0.43
CBWD3-216ENST00000621396 TRBV12-3P01733 135 aa12.36□□□□□ -0.43
CBWD3-216ENST00000621396 OR5G3P0C626 314 aa12.36□□□□□ -0.43
CBWD3-216ENST00000621396 NDUFA5Q16718 116 aa12.36□□□□□ -0.43
CBWD3-216ENST00000621396 PATE2Q6UY27 113 aa12.36□□□□□ -0.43
CBWD3-216ENST00000621396 MIR17HGQ75NE6 70 aa12.36□□□□□ -0.43
CBWD3-216ENST00000621396 TRAV5A0A0B4J249 113 aa12.36□□□□□ -0.43
CBWD3-216ENST00000621396 MAP1LC3B2A6NCE7 125 aa12.36□□□□□ -0.43
CBWD3-216ENST00000621396 CTSGP08311 255 aa12.36□□□□□ -0.43
CBWD3-216ENST00000621396 ADMP35318 185 aa12.36□□□□□ -0.43
CBWD3-216ENST00000621396 NPBWR1P48145 328 aa12.36□□□□□ -0.43
CBWD3-216ENST00000621396 CDC34P49427 236 aaPredicted RBP12.36□□□□□ -0.43
CBWD3-216ENST00000621396 CFHR3Q02985 330 aa12.36□□□□□ -0.43
CBWD3-216ENST00000621396 LEMD1Q68G75 181 aa12.36□□□□□ -0.43
CBWD3-216ENST00000621396 TRGV9Q99603 122 aa12.36□□□□□ -0.43
CBWD3-216ENST00000621396 MAP1LC3BQ9GZQ8 125 aa12.36□□□□□ -0.43
CBWD3-216ENST00000621396 GNB4Q9HAV0 340 aa12.36□□□□□ -0.43
CBWD3-216ENST00000621396 RD3LP0DJH9 198 aa12.35□□□□□ -0.43
CBWD3-216ENST00000621396 RAB9AP51151 201 aa12.35□□□□□ -0.43
CBWD3-216ENST00000621396 LYZP61626 148 aa12.35□□□□□ -0.43
CBWD3-216ENST00000621396 LYPD6BQ8NI32 183 aa12.35□□□□□ -0.43
CBWD3-216ENST00000621396 ZNF502Q8TBZ5 544 aa12.35□□□□□ -0.43
CBWD3-216ENST00000621396 RARRES2Q99969 163 aa12.35□□□□□ -0.43
CBWD3-216ENST00000621396 SERTAD4Q9NUC0 356 aa12.35□□□□□ -0.43
CBWD3-216ENST00000621396 TMEM160Q9NX00 188 aa12.35□□□□□ -0.43
CBWD3-216ENST00000621396 IGLV1-40P01703 118 aa12.35□□□□□ -0.43
CBWD3-216ENST00000621396 MBP02144 154 aa12.35□□□□□ -0.43
CBWD3-216ENST00000621396 HIST1H1BP16401 226 aaKnown RBP12.35□□□□□ -0.43
CBWD3-216ENST00000621396 ATP5G2Q06055 141 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms