RNA–Protein interactions for RNA: ENST00000621325.1

LIME1-210, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 2,410 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-210ENST00000621325 MRPL36Q9P0J6 103 aaKnown RBP17.06■□□□□ 0.32
LIME1-210ENST00000621325 GCGP01275 180 aa17.06■□□□□ 0.32
LIME1-210ENST00000621325 AREGP15514 252 aa17.06■□□□□ 0.32
LIME1-210ENST00000621325 HCP5Q6MZN7 132 aa17.06■□□□□ 0.32
LIME1-210ENST00000621325 CACNG8Q8WXS5 425 aa17.06■□□□□ 0.32
LIME1-210ENST00000621325 YTHDF2Q9Y5A9 579 aaKnown RBP17.06■□□□□ 0.32
LIME1-210ENST00000621325 A0A1W2PRD5 423 aa17.05■□□□□ 0.32
LIME1-210ENST00000621325 A0A1W2PRF3 423 aa17.05■□□□□ 0.32
LIME1-210ENST00000621325 A0A1W2PRM7 423 aa17.05■□□□□ 0.32
LIME1-210ENST00000621325 BATFQ16520 125 aa17.05■□□□□ 0.32
LIME1-210ENST00000621325 AMMECR1Q9Y4X0 333 aaPredicted RBP17.05■□□□□ 0.32
LIME1-210ENST00000621325 RUSC1-AS1Q66K80 236 aa17.05■□□□□ 0.32
LIME1-210ENST00000621325 MMD2Q8IY49 270 aa17.05■□□□□ 0.32
LIME1-210ENST00000621325 SLC35E1Q96K37 410 aa17.05■□□□□ 0.32
LIME1-210ENST00000621325 FAM210BQ96KR6 192 aa17.05■□□□□ 0.32
LIME1-210ENST00000621325 FBXL15Q9H469 300 aa17.05■□□□□ 0.32
LIME1-210ENST00000621325 TIMM23O14925 209 aa17.04■□□□□ 0.32
LIME1-210ENST00000621325 RNF151Q2KHN1 245 aa17.04■□□□□ 0.32
LIME1-210ENST00000621325 HILPDAQ9Y5L2 63 aa17.04■□□□□ 0.32
LIME1-210ENST00000621325 ACACBO00763 2458 aa17.04■□□□□ 0.32
LIME1-210ENST00000621325 NDUFB4O95168 129 aa17.04■□□□□ 0.32
LIME1-210ENST00000621325 GPR6P46095 362 aaPredicted RBP17.04■□□□□ 0.32
LIME1-210ENST00000621325 RPL27AP46776 148 aaKnown RBP17.04■□□□□ 0.32
LIME1-210ENST00000621325 MFAP2P55001 183 aa17.04■□□□□ 0.32
LIME1-210ENST00000621325 LGALS4P56470 323 aa17.04■□□□□ 0.32
LIME1-210ENST00000621325 TPTE2P1Q5T6R2 138 aa17.04■□□□□ 0.32
LIME1-210ENST00000621325 LHFPL4Q7Z7J7 247 aa17.04■□□□□ 0.32
LIME1-210ENST00000621325 NPIPB3Q92617 1050 aa17.04■□□□□ 0.32
LIME1-210ENST00000621325 WNK2Q9Y3S1 2297 aa17.03■□□□□ 0.32
LIME1-210ENST00000621325 FCN1O00602 326 aa17.03■□□□□ 0.32
LIME1-210ENST00000621325 ZFP36P26651 326 aaKnown RBP17.03■□□□□ 0.32
LIME1-210ENST00000621325 FUT9Q9Y231 359 aa17.03■□□□□ 0.32
LIME1-210ENST00000621325 CLDN34H7C241 214 aa17.02■□□□□ 0.32
LIME1-210ENST00000621325 PDE6DO43924 150 aa17.02■□□□□ 0.32
LIME1-210ENST00000621325 SUB1P53999 127 aaKnown RBP eCLIP17.02■□□□□ 0.32
LIME1-210ENST00000621325 PPP1R27Q86WC6 154 aa17.02■□□□□ 0.32
LIME1-210ENST00000621325 OR11H6Q8NGC7 330 aa17.02■□□□□ 0.32
LIME1-210ENST00000621325 TMEM37Q8WXS4 190 aa17.02■□□□□ 0.32
LIME1-210ENST00000621325 AURKAIP1Q9NWT8 199 aaPredicted RBP17.02■□□□□ 0.32
LIME1-210ENST00000621325 CD24P25063 80 aa17.02■□□□□ 0.32
LIME1-210ENST00000621325 HTR1DP28221 377 aa17.02■□□□□ 0.32
LIME1-210ENST00000621325 COMPP49747 757 aaPredicted RBP17.02■□□□□ 0.32
LIME1-210ENST00000621325 C1orf194Q5T5A4 169 aa17.02■□□□□ 0.32
LIME1-210ENST00000621325 TMEM242Q9NWH2 141 aa17.02■□□□□ 0.32
LIME1-210ENST00000621325 ABCA1O95477 2261 aa17.02■□□□□ 0.31
LIME1-210ENST00000621325 OR5T1Q8NG75 326 aa17.01■□□□□ 0.31
LIME1-210ENST00000621325 OR1P1Q8NH06 330 aa17.01■□□□□ 0.31
LIME1-210ENST00000621325 ZNF503Q96F45 646 aa17.01■□□□□ 0.31
LIME1-210ENST00000621325 POLR3KQ9Y2Y1 108 aaPredicted RBP17.01■□□□□ 0.31
LIME1-210ENST00000621325 IGKV1D-37A0A075B6S9 117 aa17.01■□□□□ 0.31
LIME1-210ENST00000621325 SCO2A0A1W2PP80 73 aa17.01■□□□□ 0.31
LIME1-210ENST00000621325 RND2P52198 227 aa17.01■□□□□ 0.31
LIME1-210ENST00000621325 ZNF90Q03938 601 aa17.01■□□□□ 0.31
LIME1-210ENST00000621325 FBLN7Q53RD9 439 aa17.01■□□□□ 0.31
LIME1-210ENST00000621325 C16orf82Q7Z2V1 217 aa17.01■□□□□ 0.31
LIME1-210ENST00000621325 DPM3Q9P2X0 92 aa17.01■□□□□ 0.31
LIME1-210ENST00000621325 SVEP1Q4LDE5 3571 aa17■□□□□ 0.31
LIME1-210ENST00000621325 KIR2DL5BA0A0G2JN68 375 aa17■□□□□ 0.31
LIME1-210ENST00000621325 KIR2DL5BA0A0G2JPC4 375 aa17■□□□□ 0.31
LIME1-210ENST00000621325 M0R1W7 72 aa17■□□□□ 0.31
LIME1-210ENST00000621325 VENTXO95231 258 aa17■□□□□ 0.31
LIME1-210ENST00000621325 MORN5Q5VZ52 161 aa17■□□□□ 0.31
LIME1-210ENST00000621325 KIR2DL5AQ8N109 375 aa17■□□□□ 0.31
LIME1-210ENST00000621325 IGSF10Q6WRI0 2623 aa17■□□□□ 0.31
LIME1-210ENST00000621325 PGPEP1LA6NFU8 196 aa17■□□□□ 0.31
LIME1-210ENST00000621325 PRTN3P24158 256 aa17■□□□□ 0.31
LIME1-210ENST00000621325 LEMD1Q68G75 181 aa17■□□□□ 0.31
LIME1-210ENST00000621325 COL12A1Q99715 3063 aa16.99■□□□□ 0.31
LIME1-210ENST00000621325 IGHV3-21A0A0B4J1V1 117 aa16.99■□□□□ 0.31
LIME1-210ENST00000621325 PSMB11A5LHX3 300 aa16.99■□□□□ 0.31
LIME1-210ENST00000621325 TEX22C9J3V5 150 aa16.99■□□□□ 0.31
LIME1-210ENST00000621325 CCL25O15444 150 aa16.99■□□□□ 0.31
LIME1-210ENST00000621325 OR5G3P0C626 314 aa16.99■□□□□ 0.31
LIME1-210ENST00000621325 ZNF114Q8NC26 417 aa16.99■□□□□ 0.31
LIME1-210ENST00000621325 NECAP1Q8NC96 275 aa16.99■□□□□ 0.31
LIME1-210ENST00000621325 OR4X1Q8NH49 305 aa16.99■□□□□ 0.31
LIME1-210ENST00000621325 ZFP30Q9Y2G7 519 aa16.99■□□□□ 0.31
LIME1-210ENST00000621325 TRBV20OR9-2A0A075B6H5 130 aa16.98■□□□□ 0.31
LIME1-210ENST00000621325 ODF3BA8MYP8 253 aa16.98■□□□□ 0.31
LIME1-210ENST00000621325 F6UZH7 168 aa16.98■□□□□ 0.31
LIME1-210ENST00000621325 CIDEAO60543 219 aa16.98■□□□□ 0.31
LIME1-210ENST00000621325 CFHR4Q92496 578 aa16.98■□□□□ 0.31
LIME1-210ENST00000621325 SLC25A33Q9BSK2 321 aa16.98■□□□□ 0.31
LIME1-210ENST00000621325 CTDSP1Q9GZU7 261 aa16.98■□□□□ 0.31
LIME1-210ENST00000621325 GSX1Q9H4S2 264 aaPredicted RBP16.98■□□□□ 0.31
LIME1-210ENST00000621325 CSMD1Q96PZ7 3565 aa16.98■□□□□ 0.31
LIME1-210ENST00000621325 TRAV5A0A0B4J249 113 aa16.98■□□□□ 0.31
LIME1-210ENST00000621325 PLGLAQ15195 96 aa16.98■□□□□ 0.31
LIME1-210ENST00000621325 IQCJQ1A5X6 159 aa16.98■□□□□ 0.31
LIME1-210ENST00000621325 CBY3A6NI87 242 aa16.97■□□□□ 0.31
LIME1-210ENST00000621325 MT-CO2P00403 227 aa16.97■□□□□ 0.31
LIME1-210ENST00000621325 OR10J4P0C629 311 aa16.97■□□□□ 0.31
LIME1-210ENST00000621325 EFNA4P52798 201 aa16.97■□□□□ 0.31
LIME1-210ENST00000621325 LCN2P80188 198 aa16.97■□□□□ 0.31
LIME1-210ENST00000621325 MMDQ15546 238 aa16.97■□□□□ 0.31
LIME1-210ENST00000621325 VMO1Q7Z5L0 202 aa16.97■□□□□ 0.31
LIME1-210ENST00000621325 LINC01551Q86U37 167 aa16.97■□□□□ 0.31
LIME1-210ENST00000621325 OR1L6Q8NGR2 347 aa16.97■□□□□ 0.31
LIME1-210ENST00000621325 SRSF12Q8WXF0 261 aaKnown RBP16.97■□□□□ 0.31
LIME1-210ENST00000621325 TECRQ9NZ01 308 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms