RNA–Protein interactions for RNA: ENST00000621217.4

GGA3-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 4,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-222ENST00000621217 A0A1B0GWB2 263 aa7.52□□□□□ -1.2
GGA3-222ENST00000621217 LINC00473A8K010 186 aa7.52□□□□□ -1.2
GGA3-222ENST00000621217 H3BTX0 84 aa7.52□□□□□ -1.2
GGA3-222ENST00000621217 CA1P00915 261 aaPredicted RBP7.52□□□□□ -1.2
GGA3-222ENST00000621217 FXYD3Q14802 87 aa7.52□□□□□ -1.2
GGA3-222ENST00000621217 SLC35E4Q6ICL7 350 aa7.52□□□□□ -1.2
GGA3-222ENST00000621217 HCP5Q6MZN7 132 aa7.52□□□□□ -1.2
GGA3-222ENST00000621217 Q6ZPA2 131 aa7.52□□□□□ -1.2
GGA3-222ENST00000621217 C5orf17Q8NAS9 161 aa7.52□□□□□ -1.2
GGA3-222ENST00000621217 LSM10Q969L4 123 aaKnown RBP7.52□□□□□ -1.2
GGA3-222ENST00000621217 TRAV3A0A0B4J244 114 aa7.52□□□□□ -1.21
GGA3-222ENST00000621217 GPR183P32249 361 aa7.52□□□□□ -1.21
GGA3-222ENST00000621217 IL15RAQ13261 267 aa7.52□□□□□ -1.21
GGA3-222ENST00000621217 COQ2Q96H96 371 aa7.52□□□□□ -1.21
GGA3-222ENST00000621217 C20orf144Q9BQM9 153 aa7.52□□□□□ -1.21
GGA3-222ENST00000621217 FNDC4Q9H6D8 234 aaPredicted RBP7.52□□□□□ -1.21
GGA3-222ENST00000621217 ADMP35318 185 aa7.52□□□□□ -1.21
GGA3-222ENST00000621217 TNXAQ16473 311 aa7.52□□□□□ -1.21
GGA3-222ENST00000621217 ZNF585BQ52M93 769 aa7.52□□□□□ -1.21
GGA3-222ENST00000621217 LHFPL4Q7Z7J7 247 aa7.52□□□□□ -1.21
GGA3-222ENST00000621217 OR10W1Q8NGF6 305 aa7.52□□□□□ -1.21
GGA3-222ENST00000621217 TCF19Q9Y242 345 aa7.52□□□□□ -1.21
GGA3-222ENST00000621217 OR51B2Q9Y5P1 312 aa7.52□□□□□ -1.21
GGA3-222ENST00000621217 IGHV1-69-2A0A0G2JMI3 117 aa7.52□□□□□ -1.21
GGA3-222ENST00000621217 K7ENP7 123 aa7.52□□□□□ -1.21
GGA3-222ENST00000621217 IGKV1-39P01597 117 aa7.52□□□□□ -1.21
GGA3-222ENST00000621217 IGKV1D-39P04432 117 aa7.52□□□□□ -1.21
GGA3-222ENST00000621217 OR9G9P0C7N8 305 aa7.52□□□□□ -1.21
GGA3-222ENST00000621217 ARL14EPLP0DKL9 152 aa7.52□□□□□ -1.21
GGA3-222ENST00000621217 GRNP28799 593 aaKnown RBP7.52□□□□□ -1.21
GGA3-222ENST00000621217 ATP5G3P48201 142 aa7.52□□□□□ -1.21
GGA3-222ENST00000621217 LRRC75BQ2VPJ9 315 aa7.52□□□□□ -1.21
GGA3-222ENST00000621217 TEX38Q6PEX7 206 aa7.52□□□□□ -1.21
GGA3-222ENST00000621217 DUX4L9Q6RFH8 374 aaPredicted RBP7.52□□□□□ -1.21
GGA3-222ENST00000621217 CD177Q8N6Q3 437 aa7.52□□□□□ -1.21
GGA3-222ENST00000621217 TMEM186Q96B77 213 aa7.52□□□□□ -1.21
GGA3-222ENST00000621217 AAMDCQ9H7C9 122 aa7.52□□□□□ -1.21
GGA3-222ENST00000621217 MSRB2Q9Y3D2 182 aa7.52□□□□□ -1.21
GGA3-222ENST00000621217 INSIG2Q9Y5U4 225 aa7.52□□□□□ -1.21
GGA3-222ENST00000621217 C7orf71A4D174 169 aa7.51□□□□□ -1.21
GGA3-222ENST00000621217 OR2T8A6NH00 312 aa7.51□□□□□ -1.21
GGA3-222ENST00000621217 IGHV1-46P01743 117 aa7.51□□□□□ -1.21
GGA3-222ENST00000621217 OCIAD2Q56VL3 154 aa7.51□□□□□ -1.21
GGA3-222ENST00000621217 FAM169BQ8N8A8 192 aa7.51□□□□□ -1.21
GGA3-222ENST00000621217 C1orf162Q8NEQ5 155 aaPredicted RBP7.51□□□□□ -1.21
GGA3-222ENST00000621217 STXBP6Q8NFX7 210 aa7.51□□□□□ -1.21
GGA3-222ENST00000621217 ZNF714Q96N38 554 aa7.51□□□□□ -1.21
GGA3-222ENST00000621217 C17orf100A8MU93 164 aa7.51□□□□□ -1.21
GGA3-222ENST00000621217 ZNF324O75467 553 aaPredicted RBP7.51□□□□□ -1.21
GGA3-222ENST00000621217 C1orf174Q8IYL3 243 aa7.51□□□□□ -1.21
GGA3-222ENST00000621217 NPCDR1Q9BY65 106 aa7.51□□□□□ -1.21
GGA3-222ENST00000621217 ZNF257Q9Y2Q1 563 aa7.51□□□□□ -1.21
GGA3-222ENST00000621217 MTORP42345 2549 aa7.51□□□□□ -1.21
GGA3-222ENST00000621217 MBD3L4A6NDZ8 208 aaPredicted RBP7.51□□□□□ -1.21
GGA3-222ENST00000621217 MBD3L3A6NE82 208 aaPredicted RBP7.51□□□□□ -1.21
GGA3-222ENST00000621217 MBD3L5A6NJ08 208 aaPredicted RBP7.51□□□□□ -1.21
GGA3-222ENST00000621217 CKS1BP61024 79 aa7.51□□□□□ -1.21
GGA3-222ENST00000621217 SELENOTP62341 195 aa7.51□□□□□ -1.21
GGA3-222ENST00000621217 CDPF1Q6NVV7 123 aa7.51□□□□□ -1.21
GGA3-222ENST00000621217 Q6ZR03 302 aa7.51□□□□□ -1.21
GGA3-222ENST00000621217 TCF23Q7RTU1 214 aa7.51□□□□□ -1.21
GGA3-222ENST00000621217 FAM90A1Q86YD7 464 aa7.51□□□□□ -1.21
GGA3-222ENST00000621217 RPP25LQ8N5L8 163 aaKnown RBP7.51□□□□□ -1.21
GGA3-222ENST00000621217 OR4F17Q8NGA8 305 aa7.51□□□□□ -1.21
GGA3-222ENST00000621217 MBD3L2Q8NHZ7 208 aaPredicted RBP7.51□□□□□ -1.21
GGA3-222ENST00000621217 GNB4Q9HAV0 340 aa7.51□□□□□ -1.21
GGA3-222ENST00000621217 ZNF256Q9Y2P7 627 aaPredicted RBP7.51□□□□□ -1.21
GGA3-222ENST00000621217 F11RQ9Y624 299 aaKnown RBP7.51□□□□□ -1.21
GGA3-222ENST00000621217 COX11Q9Y6N1 276 aa7.51□□□□□ -1.21
GGA3-222ENST00000621217 RRHO14718 337 aa7.5□□□□□ -1.21
GGA3-222ENST00000621217 TIMP3P35625 211 aa7.5□□□□□ -1.21
GGA3-222ENST00000621217 KIR2DS2P43631 304 aa7.5□□□□□ -1.21
GGA3-222ENST00000621217 GPR6P46095 362 aaPredicted RBP7.5□□□□□ -1.21
GGA3-222ENST00000621217 PAX9P55771 341 aa7.5□□□□□ -1.21
GGA3-222ENST00000621217 GCSAMQ8N6F7 178 aa7.5□□□□□ -1.21
GGA3-222ENST00000621217 DKK4Q9UBT3 224 aa7.5□□□□□ -1.21
GGA3-222ENST00000621217 GAGE12BA1L429 117 aa7.5□□□□□ -1.21
GGA3-222ENST00000621217 SLC25A17O43808 307 aa7.5□□□□□ -1.21
GGA3-222ENST00000621217 HERVK_113P61574 105 aa7.5□□□□□ -1.21
GGA3-222ENST00000621217 SEC11AP67812 179 aa7.5□□□□□ -1.21
GGA3-222ENST00000621217 ZNF146Q15072 292 aa7.5□□□□□ -1.21
GGA3-222ENST00000621217 PRR31Q5SQ13 230 aa7.5□□□□□ -1.21
GGA3-222ENST00000621217 UNQ6494/PRO21346Q6UXR6 183 aa7.5□□□□□ -1.21
GGA3-222ENST00000621217 TMEM256Q8N2U0 113 aa7.5□□□□□ -1.21
GGA3-222ENST00000621217 MYOZ3Q8TDC0 251 aa7.5□□□□□ -1.21
GGA3-222ENST00000621217 HIST1H4GQ99525 98 aa7.5□□□□□ -1.21
GGA3-222ENST00000621217 CST9LQ9H4G1 147 aa7.5□□□□□ -1.21
GGA3-222ENST00000621217 SNAI2O43623 268 aa7.5□□□□□ -1.21
GGA3-222ENST00000621217 IGKV3-15P01624 115 aa7.5□□□□□ -1.21
GGA3-222ENST00000621217 RBP4P02753 201 aa7.5□□□□□ -1.21
GGA3-222ENST00000621217 CRYBB3P26998 211 aa7.5□□□□□ -1.21
GGA3-222ENST00000621217 ELOVL5Q9NYP7 299 aa7.5□□□□□ -1.21
GGA3-222ENST00000621217 KIAA1549Q9HCM3 1950 aa7.5□□□□□ -1.21
GGA3-222ENST00000621217 SNCGO76070 127 aa7.49□□□□□ -1.21
GGA3-222ENST00000621217 GNLYP22749 145 aa7.49□□□□□ -1.21
GGA3-222ENST00000621217 HIST1H1AQ02539 215 aaPredicted RBP7.49□□□□□ -1.21
GGA3-222ENST00000621217 SPSB3Q6PJ21 355 aa7.49□□□□□ -1.21
GGA3-222ENST00000621217 DMRTC2Q8IXT2 367 aaPredicted RBP7.49□□□□□ -1.21
GGA3-222ENST00000621217 VCX2Q9H322 139 aa7.49□□□□□ -1.21
GGA3-222ENST00000621217 POLR3KQ9Y2Y1 108 aaPredicted RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms