RNA–Protein interactions for RNA: ENST00000621152.4

SMC6-210, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 3

Gene SMC6, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-210ENST00000621152 OR1S2Q8NGQ3 325 aa15.11■□□□□ 0.01
SMC6-210ENST00000621152 Q8WTZ3 238 aa15.11■□□□□ 0.01
SMC6-210ENST00000621152 RABAC1Q9UI14 185 aa15.11■□□□□ 0.01
SMC6-210ENST00000621152 A0A0B4J2A0 478 aa15.1■□□□□ 0.01
SMC6-210ENST00000621152 EWSR1Q01844 656 aaKnown RBP eCLIP15.1■□□□□ 0.01
SMC6-210ENST00000621152 RBMS2Q15434 407 aaKnown RBP15.1■□□□□ 0.01
SMC6-210ENST00000621152 ETFRF1Q6IPR1 90 aa15.1■□□□□ 0.01
SMC6-210ENST00000621152 LGI3Q8N145 548 aa15.1■□□□□ 0.01
SMC6-210ENST00000621152 TMEM170AQ8WVE7 144 aa15.1■□□□□ 0.01
SMC6-210ENST00000621152 NARS2Q96I59 477 aaKnown RBP15.1■□□□□ 0.01
SMC6-210ENST00000621152 SHPKQ9UHJ6 478 aa15.1■□□□□ 0.01
SMC6-210ENST00000621152 CSMD3Q7Z407 3707 aa15.09■□□□□ 0.01
SMC6-210ENST00000621152 TRAV2A0A0B4J234 112 aa15.09■□□□□ 0.01
SMC6-210ENST00000621152 CXorf65A6NEN9 183 aa15.09■□□□□ 0.01
SMC6-210ENST00000621152 IFNA10P01566 189 aa15.09■□□□□ 0.01
SMC6-210ENST00000621152 IGLC1P0CG04 106 aa15.09■□□□□ 0.01
SMC6-210ENST00000621152 ANXA3P12429 323 aa15.09■□□□□ 0.01
SMC6-210ENST00000621152 NPY1RP25929 384 aa15.09■□□□□ 0.01
SMC6-210ENST00000621152 OR10J1P30954 320 aa15.09■□□□□ 0.01
SMC6-210ENST00000621152 FAUP35544 74 aaKnown RBP15.09■□□□□ 0.01
SMC6-210ENST00000621152 PMS2P11Q13670 270 aa15.09■□□□□ 0.01
SMC6-210ENST00000621152 KLF9Q13886 244 aaPredicted RBP15.09■□□□□ 0.01
SMC6-210ENST00000621152 SMCO1Q147U7 214 aa15.09■□□□□ 0.01
SMC6-210ENST00000621152 LEMD1Q68G75 181 aa15.09■□□□□ 0.01
SMC6-210ENST00000621152 TOMM5Q8N4H5 51 aa15.09■□□□□ 0.01
SMC6-210ENST00000621152 FAM24BQ8N5W8 94 aa15.09■□□□□ 0.01
SMC6-210ENST00000621152 NPIPB3Q92617 1050 aa15.09■□□□□ 0.01
SMC6-210ENST00000621152 S100A5P33763 92 aa15.08■□□□□ 0
SMC6-210ENST00000621152 P2RY1P47900 373 aa15.08■□□□□ 0
SMC6-210ENST00000621152 YPEL3P61236 119 aaPredicted RBP15.08■□□□□ 0
SMC6-210ENST00000621152 TMED4Q7Z7H5 227 aa15.08■□□□□ 0
SMC6-210ENST00000621152 STXBP6Q8NFX7 210 aa15.08■□□□□ 0
SMC6-210ENST00000621152 GRAMD2BQ96HH9 432 aa15.08■□□□□ 0
SMC6-210ENST00000621152 RBKSQ9H477 322 aa15.08■□□□□ 0
SMC6-210ENST00000621152 U3KQ87 197 aa15.08■□□□□ 0
SMC6-210ENST00000621152 STARD9Q9P2P6 4700 aa15.07■□□□□ 0
SMC6-210ENST00000621152 AP3S2P59780 193 aa15.07■□□□□ 0
SMC6-210ENST00000621152 SRPXP78539 464 aa15.07■□□□□ 0
SMC6-210ENST00000621152 DTD1Q8TEA8 209 aa15.07■□□□□ 0
SMC6-210ENST00000621152 ACY3Q96HD9 319 aa15.07■□□□□ 0
SMC6-210ENST00000621152 RARRES2Q99969 163 aa15.07■□□□□ 0
SMC6-210ENST00000621152 HSPB7Q9UBY9 170 aa15.07■□□□□ 0
SMC6-210ENST00000621152 U3KQE9 123 aa15.07■□□□□ 0
SMC6-210ENST00000621152 K7EQG2 157 aa15.06■□□□□ 0
SMC6-210ENST00000621152 OR1S1Q8NH92 325 aa15.06■□□□□ 0
SMC6-210ENST00000621152 TRIM63Q969Q1 353 aa15.06■□□□□ 0
SMC6-210ENST00000621152 V9GYH0 126 aa15.06■□□□□ 0
SMC6-210ENST00000621152 SACSQ9NZJ4 4579 aa15.05■□□□□ 0
SMC6-210ENST00000621152 HNRNPCP07910 306 aaKnown RBP eCLIP15.05■□□□□ -0
SMC6-210ENST00000621152 RD3LP0DJH9 198 aa15.05■□□□□ -0
SMC6-210ENST00000621152 TMEM128Q5BJH2 165 aa15.05■□□□□ -0
SMC6-210ENST00000621152 STHQ8IWL8 128 aa15.05■□□□□ -0
SMC6-210ENST00000621152 TMEM217Q8N7C4 229 aa15.05■□□□□ -0
SMC6-210ENST00000621152 GATAD1Q8WUU5 269 aa15.05■□□□□ -0
SMC6-210ENST00000621152 IFNA4P05014 189 aa15.04■□□□□ -0
SMC6-210ENST00000621152 ATF4P18848 351 aaPredicted RBP15.04■□□□□ -0
SMC6-210ENST00000621152 EIF2B2P49770 351 aaKnown RBP15.04■□□□□ -0
SMC6-210ENST00000621152 ZNF79Q15937 498 aa15.04■□□□□ -0
SMC6-210ENST00000621152 C16orf54Q6UWD8 224 aa15.04■□□□□ -0
SMC6-210ENST00000621152 OR11H2Q8NH07 326 aa15.04■□□□□ -0
SMC6-210ENST00000621152 PIGBOS1A0A0B4J2F0 54 aa15.03■□□□□ -0
SMC6-210ENST00000621152 CA1P00915 261 aaPredicted RBP15.03■□□□□ -0
SMC6-210ENST00000621152 IL4P05112 153 aa15.03■□□□□ -0
SMC6-210ENST00000621152 VAMP1P23763 118 aa15.03■□□□□ -0
SMC6-210ENST00000621152 CEMP1Q6PRD7 247 aaPredicted RBP15.03■□□□□ -0
SMC6-210ENST00000621152 CCDC190Q86UF4 302 aa15.03■□□□□ -0
SMC6-210ENST00000621152 SLC25A21Q9BQT8 299 aaPredicted RBP15.03■□□□□ -0
SMC6-210ENST00000621152 NUPR2A6NF83 97 aa15.02■□□□□ -0
SMC6-210ENST00000621152 HELTA6NFD8 242 aa15.02■□□□□ -0
SMC6-210ENST00000621152 TOMM40O96008 361 aa15.02■□□□□ -0
SMC6-210ENST00000621152 ZNF688P0C7X2 276 aa15.02■□□□□ -0
SMC6-210ENST00000621152 PSG1P11464 419 aa15.02■□□□□ -0
SMC6-210ENST00000621152 AP2S1P53680 142 aaPredicted RBP15.02■□□□□ -0
SMC6-210ENST00000621152 ATP5IP56385 69 aaPredicted RBP15.02■□□□□ -0
SMC6-210ENST00000621152 DHRS2Q13268 280 aa15.02■□□□□ -0
SMC6-210ENST00000621152 USF2Q15853 346 aaPredicted RBP15.02■□□□□ -0
SMC6-210ENST00000621152 DCANP1Q8TF63 244 aa15.02■□□□□ -0
SMC6-210ENST00000621152 RYR2Q92736 4967 aa15.02□□□□□ -0.01
SMC6-210ENST00000621152 DUXBA0A1W2PPF3 345 aa15.01□□□□□ -0.01
SMC6-210ENST00000621152 KNCNA6PVL3 124 aa15.01□□□□□ -0.01
SMC6-210ENST00000621152 PITX3O75364 302 aa15.01□□□□□ -0.01
SMC6-210ENST00000621152 GPX4P36969 197 aaPredicted RBP15.01□□□□□ -0.01
SMC6-210ENST00000621152 GLMPQ8WWB7 406 aa15.01□□□□□ -0.01
SMC6-210ENST00000621152 OR51G1Q8NGK1 321 aa15□□□□□ -0.01
SMC6-210ENST00000621152 DEDD2Q8WXF8 326 aa15□□□□□ -0.01
SMC6-210ENST00000621152 RBM38Q9H0Z9 239 aaKnown RBP15□□□□□ -0.01
SMC6-210ENST00000621152 SFT2D2O95562 160 aa14.99□□□□□ -0.01
SMC6-210ENST00000621152 GAMTQ14353 236 aa14.99□□□□□ -0.01
SMC6-210ENST00000621152 SPANXN2Q5MJ10 180 aa14.99□□□□□ -0.01
SMC6-210ENST00000621152 LRTM2Q8N967 370 aa14.99□□□□□ -0.01
SMC6-210ENST00000621152 PAIP2BQ9ULR5 123 aaKnown RBP14.99□□□□□ -0.01
SMC6-210ENST00000621152 KLK5Q9Y337 293 aaPredicted RBP14.99□□□□□ -0.01
SMC6-210ENST00000621152 ZFP92A6NM28 416 aa14.98□□□□□ -0.01
SMC6-210ENST00000621152 BUB3O43684 328 aa14.98□□□□□ -0.01
SMC6-210ENST00000621152 IAPPP10997 89 aa14.98□□□□□ -0.01
SMC6-210ENST00000621152 SLC25A6P12236 298 aa14.98□□□□□ -0.01
SMC6-210ENST00000621152 RAB11AP62491 216 aa14.98□□□□□ -0.01
SMC6-210ENST00000621152 PPP1R1AQ13522 171 aa14.98□□□□□ -0.01
SMC6-210ENST00000621152 ACTL10Q5JWF8 245 aa14.98□□□□□ -0.01
SMC6-210ENST00000621152 TRPT1Q86TN4 253 aaKnown RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms