RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 PHLDA3Q9Y5J5 127 aa6.84□□□□□ -1.31
PTPDC1-204ENST00000620992 KBTBD11-OT1A0A1B0GTJ5 212 aa6.84□□□□□ -1.31
PTPDC1-204ENST00000620992 M0R2Z0 102 aa6.84□□□□□ -1.31
PTPDC1-204ENST00000620992 CXorf1O96002 111 aa6.84□□□□□ -1.31
PTPDC1-204ENST00000620992 SOD3P08294 240 aa6.84□□□□□ -1.31
PTPDC1-204ENST00000620992 ZNF726P1Q15940 193 aa6.84□□□□□ -1.31
PTPDC1-204ENST00000620992 OR4A47Q6IF82 309 aa6.84□□□□□ -1.31
PTPDC1-204ENST00000620992 C1orf162Q8NEQ5 155 aaPredicted RBP6.84□□□□□ -1.31
PTPDC1-204ENST00000620992 NABP2Q9BQ15 211 aa6.84□□□□□ -1.31
PTPDC1-204ENST00000620992 MSRB2Q9Y3D2 182 aa6.84□□□□□ -1.31
PTPDC1-204ENST00000620992 CXorf65A6NEN9 183 aa6.84□□□□□ -1.31
PTPDC1-204ENST00000620992 PSPNO60542 156 aa6.84□□□□□ -1.31
PTPDC1-204ENST00000620992 RAMP3O60896 148 aa6.84□□□□□ -1.31
PTPDC1-204ENST00000620992 NDUFS7O75251 213 aa6.84□□□□□ -1.31
PTPDC1-204ENST00000620992 PRSS2P07478 247 aa6.84□□□□□ -1.31
PTPDC1-204ENST00000620992 MAS1LP35410 378 aa6.84□□□□□ -1.31
PTPDC1-204ENST00000620992 AMMECR1LQ6DCA0 310 aa6.84□□□□□ -1.31
PTPDC1-204ENST00000620992 ZNF474Q6S9Z5 364 aaPredicted RBP6.84□□□□□ -1.31
PTPDC1-204ENST00000620992 ZNF295-AS1Q8N0V1 137 aa6.84□□□□□ -1.31
PTPDC1-204ENST00000620992 OR51G1Q8NGK1 321 aa6.84□□□□□ -1.31
PTPDC1-204ENST00000620992 C8orf46Q8TAG6 207 aa6.84□□□□□ -1.31
PTPDC1-204ENST00000620992 LSM10Q969L4 123 aaKnown RBP6.84□□□□□ -1.31
PTPDC1-204ENST00000620992 CBLN4Q9NTU7 201 aa6.84□□□□□ -1.31
PTPDC1-204ENST00000620992 PPIFP30405 207 aaKnown RBP6.83□□□□□ -1.32
PTPDC1-204ENST00000620992 UQCRFS1P47985 274 aa6.83□□□□□ -1.32
PTPDC1-204ENST00000620992 PNRC1Q12796 327 aaPredicted RBP6.83□□□□□ -1.32
PTPDC1-204ENST00000620992 ZNF585BQ52M93 769 aa6.83□□□□□ -1.32
PTPDC1-204ENST00000620992 HAPLN4Q86UW8 402 aa6.83□□□□□ -1.32
PTPDC1-204ENST00000620992 PPP1R27Q86WC6 154 aa6.83□□□□□ -1.32
PTPDC1-204ENST00000620992 IFITM10A6NMD0 228 aa6.83□□□□□ -1.32
PTPDC1-204ENST00000620992 B4DEV8 164 aa6.83□□□□□ -1.32
PTPDC1-204ENST00000620992 IGFBP2P18065 325 aa6.83□□□□□ -1.32
PTPDC1-204ENST00000620992 TMEM177Q53S58 311 aa6.83□□□□□ -1.32
PTPDC1-204ENST00000620992 OR10W1Q8NGF6 305 aa6.83□□□□□ -1.32
PTPDC1-204ENST00000620992 OR1L6Q8NGR2 347 aa6.83□□□□□ -1.32
PTPDC1-204ENST00000620992 NEU4Q8WWR8 484 aaPredicted RBP6.83□□□□□ -1.32
PTPDC1-204ENST00000620992 DPRXA6NFQ7 191 aa6.83□□□□□ -1.32
PTPDC1-204ENST00000620992 H3BUX3 64 aa6.83□□□□□ -1.32
PTPDC1-204ENST00000620992 IGHV2-70P01814 119 aa6.83□□□□□ -1.32
PTPDC1-204ENST00000620992 WT1P19544 449 aaPredicted RBP6.83□□□□□ -1.32
PTPDC1-204ENST00000620992 SERF2P84101 59 aa6.83□□□□□ -1.32
PTPDC1-204ENST00000620992 RELBQ01201 579 aa6.83□□□□□ -1.32
PTPDC1-204ENST00000620992 Q6P435 159 aa6.83□□□□□ -1.32
PTPDC1-204ENST00000620992 IL17RELQ6ZVW7 336 aa6.83□□□□□ -1.32
PTPDC1-204ENST00000620992 YPEL4Q96NS1 127 aa6.83□□□□□ -1.32
PTPDC1-204ENST00000620992 WNT10AQ9GZT5 417 aa6.83□□□□□ -1.32
PTPDC1-204ENST00000620992 NAT8Q9UHE5 227 aa6.83□□□□□ -1.32
PTPDC1-204ENST00000620992 A0A1W2PS18 150 aa6.83□□□□□ -1.32
PTPDC1-204ENST00000620992 RNASE1P07998 156 aaKnown RBP6.83□□□□□ -1.32
PTPDC1-204ENST00000620992 Q6ZN92 141 aa6.83□□□□□ -1.32
PTPDC1-204ENST00000620992 LINC00305Q7Z4B0 112 aa6.83□□□□□ -1.32
PTPDC1-204ENST00000620992 VAMP8Q9BV40 100 aa6.83□□□□□ -1.32
PTPDC1-204ENST00000620992 SDF2L1Q9HCN8 221 aa6.83□□□□□ -1.32
PTPDC1-204ENST00000620992 C21orf62Q9NYP8 219 aa6.83□□□□□ -1.32
PTPDC1-204ENST00000620992 SAA2-SAA4A0A096LPE2 208 aa6.82□□□□□ -1.32
PTPDC1-204ENST00000620992 TMEM189A5PLL7 270 aa6.82□□□□□ -1.32
PTPDC1-204ENST00000620992 NDUFS6O75380 124 aaKnown RBP6.82□□□□□ -1.32
PTPDC1-204ENST00000620992 SAA2P0DJI9 122 aaPredicted RBP6.82□□□□□ -1.32
PTPDC1-204ENST00000620992 FOSL1P15407 271 aa6.82□□□□□ -1.32
PTPDC1-204ENST00000620992 COL8A2P25067 703 aa6.82□□□□□ -1.32
PTPDC1-204ENST00000620992 RELQ04864 619 aaPredicted RBP6.82□□□□□ -1.32
PTPDC1-204ENST00000620992 SP5Q6BEB4 398 aaPredicted RBP6.82□□□□□ -1.32
PTPDC1-204ENST00000620992 WDR86Q86TI4 376 aa6.82□□□□□ -1.32
PTPDC1-204ENST00000620992 PRSS33Q8NF86 280 aa6.82□□□□□ -1.32
PTPDC1-204ENST00000620992 OR4X2Q8NGF9 303 aa6.82□□□□□ -1.32
PTPDC1-204ENST00000620992 AP5S1Q9NUS5 200 aa6.82□□□□□ -1.32
PTPDC1-204ENST00000620992 LOC102724200A0A096LPH7 203 aaPredicted RBP6.82□□□□□ -1.32
PTPDC1-204ENST00000620992 MYOD1P15172 320 aa6.82□□□□□ -1.32
PTPDC1-204ENST00000620992 CX3CL1P78423 397 aa6.82□□□□□ -1.32
PTPDC1-204ENST00000620992 MEF2BQ02080 365 aaPredicted RBP6.82□□□□□ -1.32
PTPDC1-204ENST00000620992 PLA2G2CQ5R387 149 aa6.82□□□□□ -1.32
PTPDC1-204ENST00000620992 ZNF497Q6ZNH5 498 aa6.82□□□□□ -1.32
PTPDC1-204ENST00000620992 RPP25LQ8N5L8 163 aaKnown RBP6.82□□□□□ -1.32
PTPDC1-204ENST00000620992 GATAD1Q8WUU5 269 aa6.82□□□□□ -1.32
PTPDC1-204ENST00000620992 PSMG3Q9BT73 122 aaPredicted RBP6.82□□□□□ -1.32
PTPDC1-204ENST00000620992 GSX1Q9H4S2 264 aaPredicted RBP6.82□□□□□ -1.32
PTPDC1-204ENST00000620992 PAM16Q9Y3D7 125 aa6.82□□□□□ -1.32
PTPDC1-204ENST00000620992 DMRT1Q9Y5R6 373 aa6.82□□□□□ -1.32
PTPDC1-204ENST00000620992 TRAV1-1A0A0B4J248 108 aa6.82□□□□□ -1.32
PTPDC1-204ENST00000620992 ZNF324O75467 553 aaPredicted RBP6.82□□□□□ -1.32
PTPDC1-204ENST00000620992 IGLV2-14P01704 120 aa6.82□□□□□ -1.32
PTPDC1-204ENST00000620992 CKS2P33552 79 aa6.82□□□□□ -1.32
PTPDC1-204ENST00000620992 SRSF9Q13242 221 aaKnown RBP eCLIP6.82□□□□□ -1.32
PTPDC1-204ENST00000620992 STPG3Q8N7X2 389 aa6.82□□□□□ -1.32
PTPDC1-204ENST00000620992 PACRGQ96M98 296 aaPredicted RBP6.82□□□□□ -1.32
PTPDC1-204ENST00000620992 SLC25A33Q9BSK2 321 aa6.82□□□□□ -1.32
PTPDC1-204ENST00000620992 NBEAQ8NFP9 2946 aa6.81□□□□□ -1.32
PTPDC1-204ENST00000620992 MLNRO43193 412 aa6.81□□□□□ -1.32
PTPDC1-204ENST00000620992 GGCTO75223 188 aaKnown RBP6.81□□□□□ -1.32
PTPDC1-204ENST00000620992 SAA1P0DJI8 122 aaPredicted RBP6.81□□□□□ -1.32
PTPDC1-204ENST00000620992 SELENOTP62341 195 aa6.81□□□□□ -1.32
PTPDC1-204ENST00000620992 ZNF56Q15929 161 aa6.81□□□□□ -1.32
PTPDC1-204ENST00000620992 Q6ZS92 163 aa6.81□□□□□ -1.32
PTPDC1-204ENST00000620992 RAX2Q96IS3 184 aa6.81□□□□□ -1.32
PTPDC1-204ENST00000620992 TRBV6-6A0A0A6YYG2 114 aa6.81□□□□□ -1.32
PTPDC1-204ENST00000620992 OR4C46A6NHA9 309 aa6.81□□□□□ -1.32
PTPDC1-204ENST00000620992 CGAP01215 116 aa6.81□□□□□ -1.32
PTPDC1-204ENST00000620992 C8orf88P0DMB2 117 aa6.81□□□□□ -1.32
PTPDC1-204ENST00000620992 GRNP28799 593 aaKnown RBP6.81□□□□□ -1.32
PTPDC1-204ENST00000620992 TFF3Q07654 80 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms