RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 TEPPQ6URK8 271 aa6.23□□□□□ -1.41
CPNE3-209ENST00000620393 BTNL8Q6UX41 500 aa6.23□□□□□ -1.41
CPNE3-209ENST00000620393 C8orf86Q6ZUL3 223 aa6.23□□□□□ -1.41
CPNE3-209ENST00000620393 ZNF491Q8N8L2 437 aa6.23□□□□□ -1.41
CPNE3-209ENST00000620393 THAP8Q8NA92 274 aa6.23□□□□□ -1.41
CPNE3-209ENST00000620393 STOML3Q8TAV4 291 aa6.23□□□□□ -1.41
CPNE3-209ENST00000620393 ZNF502Q8TBZ5 544 aa6.23□□□□□ -1.41
CPNE3-209ENST00000620393 MYOZ3Q8TDC0 251 aa6.23□□□□□ -1.41
CPNE3-209ENST00000620393 EEF1AKMT3Q96AZ1 226 aa6.23□□□□□ -1.41
CPNE3-209ENST00000620393 ACY3Q96HD9 319 aa6.23□□□□□ -1.41
CPNE3-209ENST00000620393 ATP6V0BQ99437 205 aa6.23□□□□□ -1.41
CPNE3-209ENST00000620393 GINS3Q9BRX5 216 aa6.23□□□□□ -1.41
CPNE3-209ENST00000620393 RNF114Q9Y508 228 aa6.23□□□□□ -1.41
CPNE3-209ENST00000620393 IGKV1D-37A0A075B6S9 117 aa6.22□□□□□ -1.41
CPNE3-209ENST00000620393 IGKV1OR2-108A0A075B7D4 117 aa6.22□□□□□ -1.41
CPNE3-209ENST00000620393 TRAV30A0A087WSZ9 112 aa6.22□□□□□ -1.41
CPNE3-209ENST00000620393 UBE2L5PA0A1B0GUS4 154 aa6.22□□□□□ -1.41
CPNE3-209ENST00000620393 F8W735 103 aaPredicted RBP6.22□□□□□ -1.41
CPNE3-209ENST00000620393 RPLP1P05386 114 aaKnown RBP6.22□□□□□ -1.41
CPNE3-209ENST00000620393 TPT1P13693 172 aaKnown RBP6.22□□□□□ -1.41
CPNE3-209ENST00000620393 FGF7P21781 194 aa6.22□□□□□ -1.41
CPNE3-209ENST00000620393 AKR1C1Q04828 323 aa6.22□□□□□ -1.41
CPNE3-209ENST00000620393 RAB31Q13636 194 aa6.22□□□□□ -1.41
CPNE3-209ENST00000620393 TCTEX1D4Q5JR98 221 aa6.22□□□□□ -1.41
CPNE3-209ENST00000620393 ZNF343Q6P1L6 599 aa6.22□□□□□ -1.41
CPNE3-209ENST00000620393 LCNL1Q6ZST4 164 aa6.22□□□□□ -1.41
CPNE3-209ENST00000620393 BAP18Q8IXM2 172 aa6.22□□□□□ -1.41
CPNE3-209ENST00000620393 OR4X2Q8NGF9 303 aa6.22□□□□□ -1.41
CPNE3-209ENST00000620393 WFDC12Q8WWY7 111 aa6.22□□□□□ -1.41
CPNE3-209ENST00000620393 GNPNAT1Q96EK6 184 aaPredicted RBP6.22□□□□□ -1.41
CPNE3-209ENST00000620393 UBE2E2Q96LR5 201 aa6.22□□□□□ -1.41
CPNE3-209ENST00000620393 TRGV9Q99603 122 aa6.22□□□□□ -1.41
CPNE3-209ENST00000620393 GAR1Q9NY12 217 aaKnown RBP6.22□□□□□ -1.41
CPNE3-209ENST00000620393 SLC45A2Q9UMX9 530 aa6.22□□□□□ -1.41
CPNE3-209ENST00000620393 S4R3C0 116 aa6.22□□□□□ -1.41
CPNE3-209ENST00000620393 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.21□□□□□ -1.42
CPNE3-209ENST00000620393 ZFP92A6NM28 416 aa6.21□□□□□ -1.42
CPNE3-209ENST00000620393 AGPAT2O15120 278 aa6.21□□□□□ -1.42
CPNE3-209ENST00000620393 GNG7O60262 68 aa6.21□□□□□ -1.42
CPNE3-209ENST00000620393 IGKV1-17P01599 117 aa6.21□□□□□ -1.42
CPNE3-209ENST00000620393 IGHV3-11P01762 117 aa6.21□□□□□ -1.42
CPNE3-209ENST00000620393 IGHV3-23P01764 117 aa6.21□□□□□ -1.42
CPNE3-209ENST00000620393 CTSGP08311 255 aa6.21□□□□□ -1.42
CPNE3-209ENST00000620393 IGLC1P0CG04 106 aa6.21□□□□□ -1.42
CPNE3-209ENST00000620393 ATP6V0CP27449 155 aa6.21□□□□□ -1.42
CPNE3-209ENST00000620393 OR10J1P30954 320 aa6.21□□□□□ -1.42
CPNE3-209ENST00000620393 CDX1P47902 265 aaPredicted RBP6.21□□□□□ -1.42
CPNE3-209ENST00000620393 CAMLGP49069 296 aa6.21□□□□□ -1.42
CPNE3-209ENST00000620393 DEFA5Q01523 94 aa6.21□□□□□ -1.42
CPNE3-209ENST00000620393 FOXL1Q12952 345 aa6.21□□□□□ -1.42
CPNE3-209ENST00000620393 Q56UQ5 140 aa6.21□□□□□ -1.42
CPNE3-209ENST00000620393 FAM209BQ5JX69 171 aa6.21□□□□□ -1.42
CPNE3-209ENST00000620393 CLEC19AQ6UXS0 136 aa6.21□□□□□ -1.42
CPNE3-209ENST00000620393 PRIMA1Q86XR5 153 aa6.21□□□□□ -1.42
CPNE3-209ENST00000620393 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.21□□□□□ -1.42
CPNE3-209ENST00000620393 ZNF709Q8N972 641 aa6.21□□□□□ -1.42
CPNE3-209ENST00000620393 HSD17B11Q8NBQ5 300 aa6.21□□□□□ -1.42
CPNE3-209ENST00000620393 ST8SIA2Q92186 375 aa6.21□□□□□ -1.42
CPNE3-209ENST00000620393 MGST2Q99735 147 aa6.21□□□□□ -1.42
CPNE3-209ENST00000620393 KRTAP4-12Q9BQ66 201 aa6.21□□□□□ -1.42
CPNE3-209ENST00000620393 TIMM9Q9Y5J7 89 aa6.21□□□□□ -1.42
CPNE3-209ENST00000620393 CUBNO60494 3623 aa6.21□□□□□ -1.42
CPNE3-209ENST00000620393 TCRBV4S1A1TA0A5B7 111 aa6.2□□□□□ -1.42
CPNE3-209ENST00000620393 OR2T8A6NH00 312 aa6.2□□□□□ -1.42
CPNE3-209ENST00000620393 C17orf112F2Z3M2 114 aa6.2□□□□□ -1.42
CPNE3-209ENST00000620393 FAM229AH3BQW9 127 aa6.2□□□□□ -1.42
CPNE3-209ENST00000620393 NUPL2O15504 423 aaKnown RBP6.2□□□□□ -1.42
CPNE3-209ENST00000620393 SCGB2A1O75556 95 aa6.2□□□□□ -1.42
CPNE3-209ENST00000620393 CFDP00746 253 aaPredicted RBP6.2□□□□□ -1.42
CPNE3-209ENST00000620393 SEC11BP0C7V7 166 aa6.2□□□□□ -1.42
CPNE3-209ENST00000620393 LINC00869P0C866 280 aa6.2□□□□□ -1.42
CPNE3-209ENST00000620393 SPP1P10451 314 aa6.2□□□□□ -1.42
CPNE3-209ENST00000620393 CD28P10747 220 aa6.2□□□□□ -1.42
CPNE3-209ENST00000620393 ADMP35318 185 aa6.2□□□□□ -1.42
CPNE3-209ENST00000620393 RPL29P47914 159 aaKnown RBP6.2□□□□□ -1.42
CPNE3-209ENST00000620393 YPEL3P61236 119 aaPredicted RBP6.2□□□□□ -1.42
CPNE3-209ENST00000620393 SELENOTP62341 195 aa6.2□□□□□ -1.42
CPNE3-209ENST00000620393 SERF2P84101 59 aa6.2□□□□□ -1.42
CPNE3-209ENST00000620393 RUNX1Q01196 453 aa6.2□□□□□ -1.42
CPNE3-209ENST00000620393 ZNF90Q03938 601 aa6.2□□□□□ -1.42
CPNE3-209ENST00000620393 TIGITQ495A1 244 aa6.2□□□□□ -1.42
CPNE3-209ENST00000620393 EIF5AL1Q6IS14 154 aaKnown RBP6.2□□□□□ -1.42
CPNE3-209ENST00000620393 SPSB3Q6PJ21 355 aa6.2□□□□□ -1.42
CPNE3-209ENST00000620393 TMEM182Q6ZP80 229 aaPredicted RBP6.2□□□□□ -1.42
CPNE3-209ENST00000620393 CYP2G1PQ6ZSU1 146 aa6.2□□□□□ -1.42
CPNE3-209ENST00000620393 CCDC140Q96MF4 163 aa6.2□□□□□ -1.42
CPNE3-209ENST00000620393 PSMG3Q9BT73 122 aaPredicted RBP6.2□□□□□ -1.42
CPNE3-209ENST00000620393 RSG1Q9BU20 258 aa6.2□□□□□ -1.42
CPNE3-209ENST00000620393 CHRDL1Q9BU40 450 aa6.2□□□□□ -1.42
CPNE3-209ENST00000620393 GGTLC1Q9BX51 225 aa6.2□□□□□ -1.42
CPNE3-209ENST00000620393 NPCDR1Q9BY65 106 aa6.2□□□□□ -1.42
CPNE3-209ENST00000620393 SLC25A32Q9H2D1 315 aa6.2□□□□□ -1.42
CPNE3-209ENST00000620393 GNB4Q9HAV0 340 aa6.2□□□□□ -1.42
CPNE3-209ENST00000620393 PEF1Q9UBV8 284 aaKnown RBP6.2□□□□□ -1.42
CPNE3-209ENST00000620393 RFNGQ9Y644 331 aa6.2□□□□□ -1.42
CPNE3-209ENST00000620393 TEP1Q99973 2627 aaKnown RBP6.2□□□□□ -1.42
CPNE3-209ENST00000620393 JMJD1CQ15652 2540 aa6.2□□□□□ -1.42
CPNE3-209ENST00000620393 TGOLN2O43493 480 aa6.19□□□□□ -1.42
CPNE3-209ENST00000620393 HSPB1P04792 205 aaKnown RBP6.19□□□□□ -1.42
CPNE3-209ENST00000620393 FABP1P07148 127 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms