RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 HIST1H2BJP06899 126 aa9.95□□□□□ -0.82
CIITA-212ENST00000618207 ORM2P19652 201 aa9.95□□□□□ -0.82
CIITA-212ENST00000618207 HIST1H2BOP23527 126 aa9.95□□□□□ -0.82
CIITA-212ENST00000618207 HIST1H2BBP33778 126 aa9.95□□□□□ -0.82
CIITA-212ENST00000618207 ZNF137PP52743 207 aa9.95□□□□□ -0.82
CIITA-212ENST00000618207 HIST1H2BDP58876 126 aa9.95□□□□□ -0.82
CIITA-212ENST00000618207 HIST1H2BCP62807 126 aa9.95□□□□□ -0.82
CIITA-212ENST00000618207 MMDQ15546 238 aa9.95□□□□□ -0.82
CIITA-212ENST00000618207 HIST2H2BEQ16778 126 aa9.95□□□□□ -0.82
CIITA-212ENST00000618207 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.95□□□□□ -0.82
CIITA-212ENST00000618207 ASPHD1Q5U4P2 390 aa9.95□□□□□ -0.82
CIITA-212ENST00000618207 HIST1H2BHQ93079 126 aa9.95□□□□□ -0.82
CIITA-212ENST00000618207 HIST1H2BNQ99877 126 aa9.95□□□□□ -0.82
CIITA-212ENST00000618207 HIST1H2BMQ99879 126 aa9.95□□□□□ -0.82
CIITA-212ENST00000618207 SIGLEC9Q9Y336 463 aa9.95□□□□□ -0.82
CIITA-212ENST00000618207 CENPEQ02224 2701 aa9.95□□□□□ -0.82
CIITA-212ENST00000618207 FAM208BQ5VWN6 2430 aa9.95□□□□□ -0.82
CIITA-212ENST00000618207 A8MWP6 167 aa9.95□□□□□ -0.82
CIITA-212ENST00000618207 MT-CO2P00403 227 aa9.95□□□□□ -0.82
CIITA-212ENST00000618207 PYYP10082 97 aa9.95□□□□□ -0.82
CIITA-212ENST00000618207 CRYBB3P26998 211 aa9.95□□□□□ -0.82
CIITA-212ENST00000618207 MAS1LP35410 378 aa9.95□□□□□ -0.82
CIITA-212ENST00000618207 LGALS7P47929 136 aa9.95□□□□□ -0.82
CIITA-212ENST00000618207 MFAP2P55001 183 aa9.95□□□□□ -0.82
CIITA-212ENST00000618207 SUMO1P63165 101 aaKnown RBP9.95□□□□□ -0.82
CIITA-212ENST00000618207 PRSS8Q16651 343 aa9.95□□□□□ -0.82
CIITA-212ENST00000618207 SMIM15Q7Z3B0 74 aa9.95□□□□□ -0.82
CIITA-212ENST00000618207 PPP1R27Q86WC6 154 aa9.95□□□□□ -0.82
CIITA-212ENST00000618207 ZNF503Q96F45 646 aa9.95□□□□□ -0.82
CIITA-212ENST00000618207 CLUHP3Q96NS8 147 aa9.95□□□□□ -0.82
CIITA-212ENST00000618207 SSBP3Q9BWW4 388 aaPredicted RBP9.95□□□□□ -0.82
CIITA-212ENST00000618207 GAR1Q9NY12 217 aaKnown RBP9.95□□□□□ -0.82
CIITA-212ENST00000618207 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.94□□□□□ -0.82
CIITA-212ENST00000618207 CNIH1O95406 144 aa9.94□□□□□ -0.82
CIITA-212ENST00000618207 TRGC1P0CF51 173 aa9.94□□□□□ -0.82
CIITA-212ENST00000618207 HOXA5P20719 270 aa9.94□□□□□ -0.82
CIITA-212ENST00000618207 SUB1P53999 127 aaKnown RBP eCLIP9.94□□□□□ -0.82
CIITA-212ENST00000618207 FBLN7Q53RD9 439 aa9.94□□□□□ -0.82
CIITA-212ENST00000618207 C8orf31Q8N9H6 132 aa9.94□□□□□ -0.82
CIITA-212ENST00000618207 S4R3C0 116 aa9.94□□□□□ -0.82
CIITA-212ENST00000618207 USP9XQ93008 2570 aaPredicted RBP9.94□□□□□ -0.82
CIITA-212ENST00000618207 LOC105371242A0A075B767 164 aa9.94□□□□□ -0.82
CIITA-212ENST00000618207 IGLC7A0M8Q6 106 aa9.94□□□□□ -0.82
CIITA-212ENST00000618207 PRB4P10163 310 aaPredicted RBP9.94□□□□□ -0.82
CIITA-212ENST00000618207 CDX1P47902 265 aaPredicted RBP9.94□□□□□ -0.82
CIITA-212ENST00000618207 LCN2P80188 198 aa9.94□□□□□ -0.82
CIITA-212ENST00000618207 C11orf71Q6IPW1 123 aa9.94□□□□□ -0.82
CIITA-212ENST00000618207 FAM71F2Q6NXP2 309 aa9.94□□□□□ -0.82
CIITA-212ENST00000618207 NUDT10Q8NFP7 164 aa9.94□□□□□ -0.82
CIITA-212ENST00000618207 OR4X1Q8NH49 305 aa9.94□□□□□ -0.82
CIITA-212ENST00000618207 OCC1Q8TAD7 63 aa9.94□□□□□ -0.82
CIITA-212ENST00000618207 NOL4LQ96MY1 436 aaPredicted RBP9.94□□□□□ -0.82
CIITA-212ENST00000618207 LPAR2Q9HBW0 351 aa9.94□□□□□ -0.82
CIITA-212ENST00000618207 F6UZH7 168 aa9.93□□□□□ -0.82
CIITA-212ENST00000618207 COX7A2P2O60397 106 aa9.93□□□□□ -0.82
CIITA-212ENST00000618207 PFN1P07737 140 aaKnown RBP9.93□□□□□ -0.82
CIITA-212ENST00000618207 OR5I1Q13606 314 aa9.93□□□□□ -0.82
CIITA-212ENST00000618207 MMD2Q8IY49 270 aa9.93□□□□□ -0.82
CIITA-212ENST00000618207 OR5AU1Q8NGC0 362 aa9.93□□□□□ -0.82
CIITA-212ENST00000618207 CTDSP1Q9GZU7 261 aa9.93□□□□□ -0.82
CIITA-212ENST00000618207 TMEM242Q9NWH2 141 aa9.93□□□□□ -0.82
CIITA-212ENST00000618207 TECRQ9NZ01 308 aaKnown RBP9.93□□□□□ -0.82
CIITA-212ENST00000618207 TMEM238C9JI98 176 aa9.93□□□□□ -0.82
CIITA-212ENST00000618207 H3BTX0 84 aa9.93□□□□□ -0.82
CIITA-212ENST00000618207 HTR1DP28221 377 aa9.93□□□□□ -0.82
CIITA-212ENST00000618207 GPR6P46095 362 aaPredicted RBP9.93□□□□□ -0.82
CIITA-212ENST00000618207 OR4A5Q8NH83 315 aa9.93□□□□□ -0.82
CIITA-212ENST00000618207 SLC17A3O00476 420 aa9.92□□□□□ -0.82
CIITA-212ENST00000618207 OR1B1Q8NGR6 318 aa9.92□□□□□ -0.82
CIITA-212ENST00000618207 RNASE8Q8TDE3 154 aaKnown RBP9.92□□□□□ -0.82
CIITA-212ENST00000618207 PRORYQ9H606 182 aa9.92□□□□□ -0.82
CIITA-212ENST00000618207 DNAJC4Q9NNZ3 241 aa9.92□□□□□ -0.82
CIITA-212ENST00000618207 ZNF355PQ9NSJ1 428 aa9.92□□□□□ -0.82
CIITA-212ENST00000618207 RNF24Q9Y225 148 aa9.92□□□□□ -0.82
CIITA-212ENST00000618207 UBE2L3P68036 154 aaKnown RBP9.92□□□□□ -0.82
CIITA-212ENST00000618207 KLF17Q5JT82 389 aaPredicted RBP9.92□□□□□ -0.82
CIITA-212ENST00000618207 LEMD1Q68G75 181 aa9.92□□□□□ -0.82
CIITA-212ENST00000618207 C1QL4Q86Z23 238 aa9.92□□□□□ -0.82
CIITA-212ENST00000618207 NHLRC2Q8NBF2 726 aa9.92□□□□□ -0.82
CIITA-212ENST00000618207 SRSF12Q8WXF0 261 aaKnown RBP9.92□□□□□ -0.82
CIITA-212ENST00000618207 CACNG8Q8WXS5 425 aa9.92□□□□□ -0.82
CIITA-212ENST00000618207 SGK494Q96LW2 274 aa9.92□□□□□ -0.82
CIITA-212ENST00000618207 IGKV1D-37A0A075B6S9 117 aa9.92□□□□□ -0.82
CIITA-212ENST00000618207 MDFIC2A0A1B0GVS7 189 aa9.92□□□□□ -0.82
CIITA-212ENST00000618207 IFITM10A6NMD0 228 aa9.92□□□□□ -0.82
CIITA-212ENST00000618207 PPP5D1E7EU14 171 aa9.92□□□□□ -0.82
CIITA-212ENST00000618207 ZFP36P26651 326 aaKnown RBP9.92□□□□□ -0.82
CIITA-212ENST00000618207 TEX45Q8NA69 505 aa9.92□□□□□ -0.82
CIITA-212ENST00000618207 LINC00479Q96M42 142 aa9.92□□□□□ -0.82
CIITA-212ENST00000618207 CHODLQ9H9P2 273 aa9.92□□□□□ -0.82
CIITA-212ENST00000618207 TNFRSF19Q9NS68 423 aa9.92□□□□□ -0.82
CIITA-212ENST00000618207 GGTLC3B5MD39 225 aa9.91□□□□□ -0.82
CIITA-212ENST00000618207 C8orf88P0DMB2 117 aa9.91□□□□□ -0.82
CIITA-212ENST00000618207 COMPP49747 757 aaPredicted RBP9.91□□□□□ -0.82
CIITA-212ENST00000618207 C10orf113Q5VZT2 155 aa9.91□□□□□ -0.82
CIITA-212ENST00000618207 WDR73Q6P4I2 378 aa9.91□□□□□ -0.82
CIITA-212ENST00000618207 PATE2Q6UY27 113 aa9.91□□□□□ -0.82
CIITA-212ENST00000618207 BLNKQ8WV28 456 aa9.91□□□□□ -0.82
CIITA-212ENST00000618207 ITLN2Q8WWU7 325 aaPredicted RBP9.91□□□□□ -0.82
CIITA-212ENST00000618207 DPM3Q9P2X0 92 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms