RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 FBXL17Q9UF56 701 aa3.4□□□□□ -1.87
CUL3-216ENST00000617432 UBQLN2Q9UHD9 624 aa3.4□□□□□ -1.87
CUL3-216ENST00000617432 F11RQ9Y624 299 aaKnown RBP3.4□□□□□ -1.87
CUL3-216ENST00000617432 DNAH7Q8WXX0 4024 aa3.4□□□□□ -1.87
CUL3-216ENST00000617432 A0A0B4J293 547 aa3.39□□□□□ -1.87
CUL3-216ENST00000617432 IGHV3-66A0A0C4DH42 116 aa3.39□□□□□ -1.87
CUL3-216ENST00000617432 A0A1B0GUV1 79 aa3.39□□□□□ -1.87
CUL3-216ENST00000617432 SMIM31A0A1B0GVY4 71 aa3.39□□□□□ -1.87
CUL3-216ENST00000617432 A8MWP6 167 aa3.39□□□□□ -1.87
CUL3-216ENST00000617432 I3L2K1 104 aa3.39□□□□□ -1.87
CUL3-216ENST00000617432 LGALS9O00182 355 aa3.39□□□□□ -1.87
CUL3-216ENST00000617432 ST8SIA3O43173 380 aa3.39□□□□□ -1.87
CUL3-216ENST00000617432 RAB3DO95716 219 aa3.39□□□□□ -1.87
CUL3-216ENST00000617432 APOHP02749 345 aaPredicted RBP3.39□□□□□ -1.87
CUL3-216ENST00000617432 CD74P04233 296 aa3.39□□□□□ -1.87
CUL3-216ENST00000617432 OR5AC1P0C628 307 aa3.39□□□□□ -1.87
CUL3-216ENST00000617432 EWSR1Q01844 656 aaKnown RBP eCLIP3.39□□□□□ -1.87
CUL3-216ENST00000617432 IL18Q14116 193 aa3.39□□□□□ -1.87
CUL3-216ENST00000617432 MEF2DQ14814 521 aa3.39□□□□□ -1.87
CUL3-216ENST00000617432 LCN12Q6JVE5 192 aa3.39□□□□□ -1.87
CUL3-216ENST00000617432 STEAP1BQ6NZ63 245 aa3.39□□□□□ -1.87
CUL3-216ENST00000617432 LINC00322Q6ZN03 302 aaPredicted RBP3.39□□□□□ -1.87
CUL3-216ENST00000617432 GPHB5Q86YW7 130 aa3.39□□□□□ -1.87
CUL3-216ENST00000617432 FAM219AQ8IW50 185 aa3.39□□□□□ -1.87
CUL3-216ENST00000617432 SGPP2Q8IWX5 399 aa3.39□□□□□ -1.87
CUL3-216ENST00000617432 CMTM1Q8IZ96 169 aa3.39□□□□□ -1.87
CUL3-216ENST00000617432 SLC38A6Q8IZM9 456 aa3.39□□□□□ -1.87
CUL3-216ENST00000617432 Q8N402 240 aa3.39□□□□□ -1.87
CUL3-216ENST00000617432 TMEM229BQ8NBD8 167 aa3.39□□□□□ -1.87
CUL3-216ENST00000617432 OR1L8Q8NGR8 309 aa3.39□□□□□ -1.87
CUL3-216ENST00000617432 TMEM190Q8WZ59 177 aa3.39□□□□□ -1.87
CUL3-216ENST00000617432 AP3S1Q92572 193 aa3.39□□□□□ -1.87
CUL3-216ENST00000617432 TMEM230Q96A57 120 aa3.39□□□□□ -1.87
CUL3-216ENST00000617432 PINX1Q96BK5 328 aaKnown RBP3.39□□□□□ -1.87
CUL3-216ENST00000617432 URB1-AS1Q96HZ7 61 aa3.39□□□□□ -1.87
CUL3-216ENST00000617432 BCL7BQ9BQE9 202 aa3.39□□□□□ -1.87
CUL3-216ENST00000617432 SRSF8Q9BRL6 282 aaKnown RBP3.39□□□□□ -1.87
CUL3-216ENST00000617432 RTBDNQ9BSG5 229 aaPredicted RBP3.39□□□□□ -1.87
CUL3-216ENST00000617432 TPPP3Q9BW30 176 aa3.39□□□□□ -1.87
CUL3-216ENST00000617432 ZNF436Q9C0F3 470 aaPredicted RBP3.39□□□□□ -1.87
CUL3-216ENST00000617432 C6orf62Q9GZU0 229 aaPredicted RBP3.39□□□□□ -1.87
CUL3-216ENST00000617432 C5orf66Q9H5L9 145 aa3.39□□□□□ -1.87
CUL3-216ENST00000617432 SRD5A3Q9H8P0 318 aa3.39□□□□□ -1.87
CUL3-216ENST00000617432 SIGLEC8Q9NYZ4 499 aa3.39□□□□□ -1.87
CUL3-216ENST00000617432 CCDC59Q9P031 241 aaKnown RBP3.39□□□□□ -1.87
CUL3-216ENST00000617432 PEMTQ9UBM1 199 aa3.39□□□□□ -1.87
CUL3-216ENST00000617432 CEPT1Q9Y6K0 416 aa3.39□□□□□ -1.87
CUL3-216ENST00000617432 NBEAL2Q6ZNJ1 2754 aa3.39□□□□□ -1.87
CUL3-216ENST00000617432 CSMD3Q7Z407 3707 aa3.38□□□□□ -1.87
CUL3-216ENST00000617432 IGKV3-7A0A075B6H7 116 aa3.38□□□□□ -1.87
CUL3-216ENST00000617432 TRBV7-1A0A0A6YYK4 115 aa3.38□□□□□ -1.87
CUL3-216ENST00000617432 C3orf85A0A1B0GTC6 90 aa3.38□□□□□ -1.87
CUL3-216ENST00000617432 A8MZ25 164 aa3.38□□□□□ -1.87
CUL3-216ENST00000617432 OR11H12B2RN74 326 aa3.38□□□□□ -1.87
CUL3-216ENST00000617432 H0Y980 276 aa3.38□□□□□ -1.87
CUL3-216ENST00000617432 GABARAPH6UMI1 98 aa3.38□□□□□ -1.87
CUL3-216ENST00000617432 SNAPC5O75971 98 aa3.38□□□□□ -1.87
CUL3-216ENST00000617432 MT-CO2P00403 227 aa3.38□□□□□ -1.87
CUL3-216ENST00000617432 RNASE2P10153 161 aaKnown RBP3.38□□□□□ -1.87
CUL3-216ENST00000617432 HIST1H1BP16401 226 aaKnown RBP3.38□□□□□ -1.87
CUL3-216ENST00000617432 PTBP1P26599 531 aaKnown RBP eCLIP3.38□□□□□ -1.874e-6■■□□□ 11.8
CUL3-216ENST00000617432 TNFSF8P32971 234 aa3.38□□□□□ -1.87
CUL3-216ENST00000617432 ETV6P41212 452 aa3.38□□□□□ -1.87
CUL3-216ENST00000617432 TFPI2P48307 235 aa3.38□□□□□ -1.87
CUL3-216ENST00000617432 AKR1C2P52895 323 aa3.38□□□□□ -1.87
CUL3-216ENST00000617432 TAS2R19P59542 299 aa3.38□□□□□ -1.87
CUL3-216ENST00000617432 RND3P61587 244 aa3.38□□□□□ -1.87
CUL3-216ENST00000617432 PRCDQ00LT1 54 aa3.38□□□□□ -1.87
CUL3-216ENST00000617432 ZNF79Q15937 498 aa3.38□□□□□ -1.87
CUL3-216ENST00000617432 TRIM16LQ309B1 348 aa3.38□□□□□ -1.87
CUL3-216ENST00000617432 Q56UQ5 140 aa3.38□□□□□ -1.87
CUL3-216ENST00000617432 CASC10Q5T4H9 136 aa3.38□□□□□ -1.87
CUL3-216ENST00000617432 ZNF57Q68EA5 555 aaPredicted RBP3.38□□□□□ -1.87
CUL3-216ENST00000617432 PLET1Q6UQ28 207 aa3.38□□□□□ -1.87
CUL3-216ENST00000617432 H2BFWTQ7Z2G1 175 aa3.38□□□□□ -1.87
CUL3-216ENST00000617432 GTSCR1Q86UQ5 136 aa3.38□□□□□ -1.87
CUL3-216ENST00000617432 FAM24BQ8N5W8 94 aa3.38□□□□□ -1.87
CUL3-216ENST00000617432 OR51S1Q8NGJ8 323 aa3.38□□□□□ -1.87
CUL3-216ENST00000617432 MUC7Q8TAX7 377 aa3.38□□□□□ -1.87
CUL3-216ENST00000617432 CD300LFQ8TDQ1 290 aa3.38□□□□□ -1.87
CUL3-216ENST00000617432 TMEM170AQ8WVE7 144 aa3.38□□□□□ -1.87
CUL3-216ENST00000617432 SMIM4Q8WVI0 70 aa3.38□□□□□ -1.87
CUL3-216ENST00000617432 GPR146Q96CH1 333 aa3.38□□□□□ -1.87
CUL3-216ENST00000617432 DIRAS2Q96HU8 199 aa3.38□□□□□ -1.87
CUL3-216ENST00000617432 SOSTQ9BQB4 213 aa3.38□□□□□ -1.87
CUL3-216ENST00000617432 C20orf24Q9BUV8 137 aa3.38□□□□□ -1.87
CUL3-216ENST00000617432 FNDC4Q9H6D8 234 aaPredicted RBP3.38□□□□□ -1.87
CUL3-216ENST00000617432 C21orf62Q9NYP8 219 aa3.38□□□□□ -1.87
CUL3-216ENST00000617432 PRNDQ9UKY0 176 aa3.38□□□□□ -1.87
CUL3-216ENST00000617432 V9GYH0 126 aa3.38□□□□□ -1.87
CUL3-216ENST00000617432 STAB2Q8WWQ8 2551 aa3.38□□□□□ -1.87
CUL3-216ENST00000617432 DYNC2H1Q8NCM8 4307 aaKnown RBP3.38□□□□□ -1.87
CUL3-216ENST00000617432 SORL1Q92673 2214 aa3.37□□□□□ -1.87
CUL3-216ENST00000617432 A0A1B0GU03 582 aa3.37□□□□□ -1.87
CUL3-216ENST00000617432 ANKRD20A5PA0PJZ0 165 aa3.37□□□□□ -1.87
CUL3-216ENST00000617432 H0Y8G0 127 aa3.37□□□□□ -1.87
CUL3-216ENST00000617432 DHFRP00374 187 aa3.37□□□□□ -1.87
CUL3-216ENST00000617432 IFNA6P05013 189 aa3.37□□□□□ -1.87
CUL3-216ENST00000617432 CTSDP07339 412 aaPredicted RBP3.37□□□□□ -1.87
CUL3-216ENST00000617432 CTSGP08311 255 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms