RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 RAB31Q13636 194 aa6.17□□□□□ -1.42
NEK3-207ENST00000617054 HABP2Q14520 560 aaPredicted RBP6.17□□□□□ -1.42
NEK3-207ENST00000617054 ZNF506Q5JVG8 444 aa6.17□□□□□ -1.42
NEK3-207ENST00000617054 SLC35E3Q7Z769 313 aa6.17□□□□□ -1.42
NEK3-207ENST00000617054 OR4F5Q8NH21 305 aa6.17□□□□□ -1.42
NEK3-207ENST00000617054 RPUSD4Q96CM3 377 aaKnown RBP6.17□□□□□ -1.42
NEK3-207ENST00000617054 SLC35E1Q96K37 410 aa6.17□□□□□ -1.42
NEK3-207ENST00000617054 OR4F4Q96R69 305 aa6.17□□□□□ -1.42
NEK3-207ENST00000617054 TNFRSF19Q9NS68 423 aa6.17□□□□□ -1.42
NEK3-207ENST00000617054 PDZD2O15018 2839 aa6.17□□□□□ -1.42
NEK3-207ENST00000617054 MDFIC2A0A1B0GVS7 189 aa6.17□□□□□ -1.42
NEK3-207ENST00000617054 BTBD17A6NE02 478 aa6.17□□□□□ -1.42
NEK3-207ENST00000617054 H3BQ15 152 aa6.17□□□□□ -1.42
NEK3-207ENST00000617054 MPDU1O75352 247 aa6.17□□□□□ -1.42
NEK3-207ENST00000617054 SNAPINO95295 136 aa6.17□□□□□ -1.42
NEK3-207ENST00000617054 ORM2P19652 201 aa6.17□□□□□ -1.42
NEK3-207ENST00000617054 LEMD1Q68G75 181 aa6.17□□□□□ -1.42
NEK3-207ENST00000617054 MALSU1Q96EH3 234 aa6.17□□□□□ -1.42
NEK3-207ENST00000617054 U3KQE9 123 aa6.17□□□□□ -1.42
NEK3-207ENST00000617054 UNC79Q9P2D8 2635 aa6.16□□□□□ -1.42
NEK3-207ENST00000617054 MSMBP08118 114 aa6.16□□□□□ -1.42
NEK3-207ENST00000617054 RPL29P47914 159 aaKnown RBP6.16□□□□□ -1.42
NEK3-207ENST00000617054 ASPHD1Q5U4P2 390 aa6.16□□□□□ -1.42
NEK3-207ENST00000617054 CCDC144NLQ6NUI1 221 aa6.16□□□□□ -1.42
NEK3-207ENST00000617054 SPNS3Q6ZMD2 512 aa6.16□□□□□ -1.42
NEK3-207ENST00000617054 NPBQ8NG41 125 aa6.16□□□□□ -1.42
NEK3-207ENST00000617054 DERL1Q9BUN8 251 aa6.16□□□□□ -1.42
NEK3-207ENST00000617054 IGHV3-35A0A0C4DH35 117 aa6.16□□□□□ -1.42
NEK3-207ENST00000617054 C7orf77A4D0Y5 90 aa6.16□□□□□ -1.42
NEK3-207ENST00000617054 NDUFA3O95167 84 aa6.16□□□□□ -1.42
NEK3-207ENST00000617054 OR5G3P0C626 314 aa6.16□□□□□ -1.42
NEK3-207ENST00000617054 KHDC3LQ587J8 217 aa6.16□□□□□ -1.42
NEK3-207ENST00000617054 SAMD5Q5TGI4 173 aa6.16□□□□□ -1.42
NEK3-207ENST00000617054 MINOS1Q5TGZ0 78 aa6.16□□□□□ -1.42
NEK3-207ENST00000617054 Q8N9W7 124 aa6.16□□□□□ -1.42
NEK3-207ENST00000617054 F11RQ9Y624 299 aaKnown RBP6.16□□□□□ -1.42
NEK3-207ENST00000617054 MINOS1-NBL1R4GNA1 71 aa6.16□□□□□ -1.42
NEK3-207ENST00000617054 IGHV3OR16-8A0A075B7F1 116 aa6.16□□□□□ -1.42
NEK3-207ENST00000617054 PGPEP1LA6NFU8 196 aa6.16□□□□□ -1.42
NEK3-207ENST00000617054 G3V318 75 aa6.16□□□□□ -1.42
NEK3-207ENST00000617054 TGFAP01135 160 aa6.16□□□□□ -1.42
NEK3-207ENST00000617054 FAM106CPP0CH98 169 aa6.16□□□□□ -1.42
NEK3-207ENST00000617054 NPPCP23582 126 aa6.16□□□□□ -1.42
NEK3-207ENST00000617054 MEF2BQ02080 365 aaPredicted RBP6.16□□□□□ -1.42
NEK3-207ENST00000617054 ECSCRQ19T08 205 aa6.16□□□□□ -1.42
NEK3-207ENST00000617054 FAM90A2PQ658T7 463 aa6.16□□□□□ -1.42
NEK3-207ENST00000617054 PATE2Q6UY27 113 aa6.16□□□□□ -1.42
NEK3-207ENST00000617054 CYP2G1PQ6ZSU1 146 aa6.16□□□□□ -1.42
NEK3-207ENST00000617054 VAX2Q9UIW0 290 aa6.16□□□□□ -1.42
NEK3-207ENST00000617054 SETD2Q9BYW2 2564 aaPredicted RBP6.15□□□□□ -1.42
NEK3-207ENST00000617054 IGHV7-81A0A0B4J1V7 117 aa6.15□□□□□ -1.42
NEK3-207ENST00000617054 H3BTX0 84 aa6.15□□□□□ -1.42
NEK3-207ENST00000617054 NDUFS8O00217 210 aa6.15□□□□□ -1.42
NEK3-207ENST00000617054 OR7C2O60412 319 aa6.15□□□□□ -1.42
NEK3-207ENST00000617054 EGR2P11161 476 aaPredicted RBP6.15□□□□□ -1.42
NEK3-207ENST00000617054 HNF1AP20823 631 aa6.15□□□□□ -1.42
NEK3-207ENST00000617054 PSMB3P49720 205 aa6.15□□□□□ -1.42
NEK3-207ENST00000617054 Q8N6K4 173 aa6.15□□□□□ -1.42
NEK3-207ENST00000617054 OR1B1Q8NGR6 318 aa6.15□□□□□ -1.42
NEK3-207ENST00000617054 OR1P1Q8NH06 330 aa6.15□□□□□ -1.42
NEK3-207ENST00000617054 OR4X1Q8NH49 305 aa6.15□□□□□ -1.42
NEK3-207ENST00000617054 RNASEH2CQ8TDP1 164 aaKnown RBP6.15□□□□□ -1.42
NEK3-207ENST00000617054 C1orf43Q9BWL3 253 aa6.15□□□□□ -1.42
NEK3-207ENST00000617054 YTHDF2Q9Y5A9 579 aaKnown RBP6.15□□□□□ -1.42
NEK3-207ENST00000617054 IGHV1-69DA0A0B4J2H0 117 aa6.15□□□□□ -1.43
NEK3-207ENST00000617054 SEC14L6B5MCN3 397 aa6.15□□□□□ -1.43
NEK3-207ENST00000617054 C11orf94C9JXX5 98 aa6.15□□□□□ -1.43
NEK3-207ENST00000617054 INS-IGF2F8WCM5 200 aa6.15□□□□□ -1.43
NEK3-207ENST00000617054 IGHV1-69P01742 117 aa6.15□□□□□ -1.43
NEK3-207ENST00000617054 STAG3L2P0CL84 134 aa6.15□□□□□ -1.43
NEK3-207ENST00000617054 STAG3L3P0CL85 134 aa6.15□□□□□ -1.43
NEK3-207ENST00000617054 PYYP10082 97 aa6.15□□□□□ -1.43
NEK3-207ENST00000617054 CTRB1P17538 263 aa6.15□□□□□ -1.43
NEK3-207ENST00000617054 GPX4P36969 197 aaPredicted RBP6.15□□□□□ -1.43
NEK3-207ENST00000617054 C9orf152Q5JTZ5 239 aa6.15□□□□□ -1.43
NEK3-207ENST00000617054 CTRB2Q6GPI1 263 aa6.15□□□□□ -1.43
NEK3-207ENST00000617054 ZNF562Q6V9R5 426 aa6.15□□□□□ -1.43
NEK3-207ENST00000617054 MRPL41Q8IXM3 137 aaKnown RBP6.15□□□□□ -1.43
NEK3-207ENST00000617054 BCL6BQ8N143 479 aaPredicted RBP6.15□□□□□ -1.43
NEK3-207ENST00000617054 CACNG8Q8WXS5 425 aa6.15□□□□□ -1.43
NEK3-207ENST00000617054 ARPC1AQ92747 370 aa6.15□□□□□ -1.43
NEK3-207ENST00000617054 ZNF503Q96F45 646 aa6.15□□□□□ -1.43
NEK3-207ENST00000617054 SSX3Q99909 188 aa6.15□□□□□ -1.43
NEK3-207ENST00000617054 RNF5Q99942 180 aa6.15□□□□□ -1.43
NEK3-207ENST00000617054 URGCP-MRPS24S4R325 110 aa6.15□□□□□ -1.43
NEK3-207ENST00000617054 OR2J3O76001 311 aa6.14□□□□□ -1.43
NEK3-207ENST00000617054 PLA2G2AP14555 144 aa6.14□□□□□ -1.43
NEK3-207ENST00000617054 MAS1LP35410 378 aa6.14□□□□□ -1.43
NEK3-207ENST00000617054 RBMS3Q6XE24 437 aaKnown RBP6.14□□□□□ -1.43
NEK3-207ENST00000617054 PIFOQ8TCI5 191 aa6.14□□□□□ -1.43
NEK3-207ENST00000617054 MS4A10Q96PG2 267 aa6.14□□□□□ -1.43
NEK3-207ENST00000617054 ZNF355PQ9NSJ1 428 aa6.14□□□□□ -1.43
NEK3-207ENST00000617054 TBL2Q9Y4P3 447 aaKnown RBP6.14□□□□□ -1.43
NEK3-207ENST00000617054 MYO9AB2RTY4 2548 aa6.14□□□□□ -1.43
NEK3-207ENST00000617054 I3L2K1 104 aa6.14□□□□□ -1.43
NEK3-207ENST00000617054 RHOBP62745 196 aa6.14□□□□□ -1.43
NEK3-207ENST00000617054 TIGITQ495A1 244 aa6.14□□□□□ -1.43
NEK3-207ENST00000617054 Q6ZS46 218 aa6.14□□□□□ -1.43
NEK3-207ENST00000617054 RASL11BQ9BPW5 248 aa6.14□□□□□ -1.43
NEK3-207ENST00000617054 PLA2G2DQ9UNK4 145 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms