RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-231	ENST00000616390		E7EQL1	145 aa		11.25	□□□□□ -0.61
CACNA1C-231	ENST00000616390		K7EN84	100 aa		11.25	□□□□□ -0.61
CACNA1C-231	ENST00000616390	MT-CO2	P00403	227 aa		11.25	□□□□□ -0.61
CACNA1C-231	ENST00000616390	PDLIM4	P50479	330 aa		11.25	□□□□□ -0.61
CACNA1C-231	ENST00000616390	OCIAD2	Q56VL3	154 aa		11.25	□□□□□ -0.61
CACNA1C-231	ENST00000616390	OR10G8	Q8NGN5	311 aa		11.25	□□□□□ -0.61
CACNA1C-231	ENST00000616390	LINC01560	Q8TB33	94 aa		11.25	□□□□□ -0.61
CACNA1C-231	ENST00000616390	IMMP2L	Q96T52	175 aa		11.25	□□□□□ -0.61
CACNA1C-231	ENST00000616390	ZNF257	Q9Y2Q1	563 aa		11.25	□□□□□ -0.61
CACNA1C-231	ENST00000616390	ATP5J2	P56134	94 aa		11.25	□□□□□ -0.61
CACNA1C-231	ENST00000616390	ERVFC1-1	P60608	527 aa		11.25	□□□□□ -0.61
CACNA1C-231	ENST00000616390	SUMO1	P63165	101 aa	Known RBP	11.25	□□□□□ -0.61
CACNA1C-231	ENST00000616390	ERH	P84090	104 aa	Known RBP	11.25	□□□□□ -0.61
CACNA1C-231	ENST00000616390	ZNF90	Q03938	601 aa		11.25	□□□□□ -0.61
CACNA1C-231	ENST00000616390	POU2AF1	Q16633	256 aa		11.25	□□□□□ -0.61
CACNA1C-231	ENST00000616390	MORN5	Q5VZ52	161 aa		11.25	□□□□□ -0.61
CACNA1C-231	ENST00000616390	ASCL5	Q7RTU5	278 aa		11.25	□□□□□ -0.61
CACNA1C-231	ENST00000616390	UHRF2	Q96PU4	802 aa		11.25	□□□□□ -0.61
CACNA1C-231	ENST00000616390	SCNM1	Q9BWG6	230 aa		11.25	□□□□□ -0.61
CACNA1C-231	ENST00000616390	SSUH2	Q9Y2M2	353 aa		11.25	□□□□□ -0.61
CACNA1C-231	ENST00000616390	WNK2	Q9Y3S1	2297 aa		11.25	□□□□□ -0.61
CACNA1C-231	ENST00000616390	LGALS4	P56470	323 aa		11.24	□□□□□ -0.61
CACNA1C-231	ENST00000616390	ACTL10	Q5JWF8	245 aa		11.24	□□□□□ -0.61
CACNA1C-231	ENST00000616390	C19orf35	Q6ZS72	473 aa		11.24	□□□□□ -0.61
CACNA1C-231	ENST00000616390	LINC00574	Q9H8X3	128 aa		11.24	□□□□□ -0.61
CACNA1C-231	ENST00000616390	FKBP11	Q9NYL4	201 aa		11.24	□□□□□ -0.61
CACNA1C-231	ENST00000616390	BET1L	Q9NYM9	111 aa		11.24	□□□□□ -0.61
CACNA1C-231	ENST00000616390	PEF1	Q9UBV8	284 aa	Known RBP	11.24	□□□□□ -0.61
CACNA1C-231	ENST00000616390	SLC35B1	P78383	322 aa		11.24	□□□□□ -0.61
CACNA1C-231	ENST00000616390	TBR1	Q16650	682 aa		11.24	□□□□□ -0.61
CACNA1C-231	ENST00000616390	TMEM249	Q2WGJ8	235 aa		11.24	□□□□□ -0.61
CACNA1C-231	ENST00000616390	HCP5	Q6MZN7	132 aa		11.24	□□□□□ -0.61
CACNA1C-231	ENST00000616390	TEX38	Q6PEX7	206 aa		11.24	□□□□□ -0.61
CACNA1C-231	ENST00000616390	OR1L8	Q8NGR8	309 aa		11.24	□□□□□ -0.61
CACNA1C-231	ENST00000616390	OSR1	Q8TAX0	266 aa	Predicted RBP	11.24	□□□□□ -0.61
CACNA1C-231	ENST00000616390	GLMP	Q8WWB7	406 aa		11.24	□□□□□ -0.61
CACNA1C-231	ENST00000616390	GRIFIN	A4D1Z8	144 aa		11.23	□□□□□ -0.61
CACNA1C-231	ENST00000616390	FRMD6-AS1	P0C7T7	363 aa		11.23	□□□□□ -0.61
CACNA1C-231	ENST00000616390	LGALS7	P47929	136 aa		11.23	□□□□□ -0.61
CACNA1C-231	ENST00000616390	MEF2C	Q06413	473 aa	Predicted RBP	11.23	□□□□□ -0.61
CACNA1C-231	ENST00000616390	UBE2V1	Q13404	147 aa		11.23	□□□□□ -0.61
CACNA1C-231	ENST00000616390	PSG3	Q16557	428 aa		11.23	□□□□□ -0.61
CACNA1C-231	ENST00000616390	PQLC2	Q6ZP29	291 aa		11.23	□□□□□ -0.61
CACNA1C-231	ENST00000616390	NHLRC2	Q8NBF2	726 aa		11.23	□□□□□ -0.61
CACNA1C-231	ENST00000616390	OR5B3	Q8NH48	314 aa		11.23	□□□□□ -0.61
CACNA1C-231	ENST00000616390	AKAP6	Q13023	2319 aa		11.23	□□□□□ -0.61
CACNA1C-231	ENST00000616390	HELT	A6NFD8	242 aa		11.23	□□□□□ -0.61
CACNA1C-231	ENST00000616390	FBLL1	A6NHQ2	334 aa	Known RBP	11.23	□□□□□ -0.61
CACNA1C-231	ENST00000616390	FAM90A27P	A6NNH2	459 aa		11.23	□□□□□ -0.61
CACNA1C-231	ENST00000616390	WT1-AS	Q06250	92 aa		11.23	□□□□□ -0.61
CACNA1C-231	ENST00000616390	CD69	Q07108	199 aa		11.23	□□□□□ -0.61
CACNA1C-231	ENST00000616390	FXYD3	Q14802	87 aa		11.23	□□□□□ -0.61
CACNA1C-231	ENST00000616390	JOSD1	Q15040	202 aa	Predicted RBP	11.23	□□□□□ -0.61
CACNA1C-231	ENST00000616390	C2orf83	Q53S99	150 aa		11.23	□□□□□ -0.61
CACNA1C-231	ENST00000616390	OR4C13	Q8NGP0	309 aa		11.23	□□□□□ -0.61
CACNA1C-231	ENST00000616390	NPIPB3	Q92617	1050 aa		11.23	□□□□□ -0.61
CACNA1C-231	ENST00000616390	ZNF503	Q96F45	646 aa		11.23	□□□□□ -0.61
CACNA1C-231	ENST00000616390	NDUFA4L2	Q9NRX3	87 aa		11.23	□□□□□ -0.61
CACNA1C-231	ENST00000616390	SHISA9	B4DS77	424 aa		11.22	□□□□□ -0.61
CACNA1C-231	ENST00000616390	CBLN1	P23435	193 aa		11.22	□□□□□ -0.61
CACNA1C-231	ENST00000616390	LOX	P28300	417 aa	Predicted RBP	11.22	□□□□□ -0.61
CACNA1C-231	ENST00000616390	GRN	P28799	593 aa	Known RBP	11.22	□□□□□ -0.61
CACNA1C-231	ENST00000616390	CNN1	P51911	297 aa	Known RBP	11.22	□□□□□ -0.61
CACNA1C-231	ENST00000616390	OR5AN1	Q8NGI8	311 aa		11.22	□□□□□ -0.61
CACNA1C-231	ENST00000616390	ORAOV1	Q8WV07	137 aa		11.22	□□□□□ -0.61
CACNA1C-231	ENST00000616390	SLC35E1	Q96K37	410 aa		11.22	□□□□□ -0.61
CACNA1C-231	ENST00000616390	TECR	Q9NZ01	308 aa	Known RBP	11.22	□□□□□ -0.61
CACNA1C-231	ENST00000616390	MGST1	P10620	155 aa	Known RBP	11.22	□□□□□ -0.61
CACNA1C-231	ENST00000616390	GNG4	P50150	75 aa		11.22	□□□□□ -0.61
CACNA1C-231	ENST00000616390	MRPL41	Q8IXM3	137 aa	Known RBP	11.22	□□□□□ -0.61
CACNA1C-231	ENST00000616390	TMEM256	Q8N2U0	113 aa		11.22	□□□□□ -0.61
CACNA1C-231	ENST00000616390	RNASE7	Q9H1E1	156 aa	Known RBP	11.22	□□□□□ -0.61
CACNA1C-231	ENST00000616390	IGHV1-69-2	A0A0G2JMI3	117 aa		11.22	□□□□□ -0.61
CACNA1C-231	ENST00000616390	PYY	P10082	97 aa		11.22	□□□□□ -0.61
CACNA1C-231	ENST00000616390	CNTFR	P26992	372 aa		11.22	□□□□□ -0.61
CACNA1C-231	ENST00000616390	CENPW	Q5EE01	88 aa		11.22	□□□□□ -0.61
CACNA1C-231	ENST00000616390	SAMD13	Q5VXD3	122 aa		11.22	□□□□□ -0.61
CACNA1C-231	ENST00000616390	EAF1	Q96JC9	268 aa	Predicted RBP	11.22	□□□□□ -0.61
CACNA1C-231	ENST00000616390	LINC00479	Q96M42	142 aa		11.22	□□□□□ -0.61
CACNA1C-231	ENST00000616390	FNDC4	Q9H6D8	234 aa	Predicted RBP	11.22	□□□□□ -0.61
CACNA1C-231	ENST00000616390	ADM	P35318	185 aa		11.21	□□□□□ -0.61
CACNA1C-231	ENST00000616390	NBL1	P41271	181 aa		11.21	□□□□□ -0.61
CACNA1C-231	ENST00000616390	TCL1A	P56279	114 aa		11.21	□□□□□ -0.61
CACNA1C-231	ENST00000616390	TXNDC17	Q9BRA2	123 aa		11.21	□□□□□ -0.61
CACNA1C-231	ENST00000616390	MRPL36	Q9P0J6	103 aa	Known RBP	11.21	□□□□□ -0.61
CACNA1C-231	ENST00000616390	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	11.21	□□□□□ -0.62
CACNA1C-231	ENST00000616390	DLL1	O00548	723 aa		11.21	□□□□□ -0.62
CACNA1C-231	ENST00000616390	LY6H	O94772	140 aa		11.21	□□□□□ -0.62
CACNA1C-231	ENST00000616390	OR5G3	P0C626	314 aa		11.21	□□□□□ -0.62
CACNA1C-231	ENST00000616390	SCGB1A1	P11684	91 aa		11.21	□□□□□ -0.62
CACNA1C-231	ENST00000616390	USF1	P22415	310 aa	Predicted RBP	11.21	□□□□□ -0.62
CACNA1C-231	ENST00000616390	SERTAD4	Q9NUC0	356 aa		11.21	□□□□□ -0.62
CACNA1C-231	ENST00000616390	CGB1	A6NKQ9	187 aa		11.2	□□□□□ -0.62
CACNA1C-231	ENST00000616390	GGTLC3	B5MD39	225 aa		11.2	□□□□□ -0.62
CACNA1C-231	ENST00000616390	NUPR1	O60356	82 aa		11.2	□□□□□ -0.62
CACNA1C-231	ENST00000616390	CD99	P14209	185 aa		11.2	□□□□□ -0.62
CACNA1C-231	ENST00000616390	RPL15	P61313	204 aa	Known RBP	11.2	□□□□□ -0.62
CACNA1C-231	ENST00000616390	TMEM177	Q53S58	311 aa		11.2	□□□□□ -0.62
CACNA1C-231	ENST00000616390	COL5A1-AS1	Q5SY13	56 aa		11.2	□□□□□ -0.62
CACNA1C-231	ENST00000616390	RUSC1-AS1	Q66K80	236 aa		11.2	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms