RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 OSTCQ9NRP0 149 aa10.77□□□□□ -0.69
MSH6-214ENST00000616033 IGKV3D-15A0A087WSY6 115 aa10.77□□□□□ -0.69
MSH6-214ENST00000616033 A0A1W2PRD5 423 aa10.77□□□□□ -0.69
MSH6-214ENST00000616033 A0A1W2PRF3 423 aa10.77□□□□□ -0.69
MSH6-214ENST00000616033 A0A1W2PRM7 423 aa10.77□□□□□ -0.69
MSH6-214ENST00000616033 FAM231BA6NCW3 169 aa10.77□□□□□ -0.69
MSH6-214ENST00000616033 LEPROTL1O95214 131 aa10.77□□□□□ -0.69
MSH6-214ENST00000616033 RAB9AP51151 201 aa10.77□□□□□ -0.69
MSH6-214ENST00000616033 OR4A5Q8NH83 315 aa10.77□□□□□ -0.69
MSH6-214ENST00000616033 NBASA2RRP1 2371 aa10.77□□□□□ -0.69
MSH6-214ENST00000616033 SPRY3O43610 288 aa10.76□□□□□ -0.69
MSH6-214ENST00000616033 HSPE1P61604 102 aaKnown RBP10.76□□□□□ -0.69
MSH6-214ENST00000616033 C5orf17Q8NAS9 161 aa10.76□□□□□ -0.69
MSH6-214ENST00000616033 SAP30LQ9HAJ7 183 aa10.76□□□□□ -0.69
MSH6-214ENST00000616033 COX7A2P2O60397 106 aa10.76□□□□□ -0.69
MSH6-214ENST00000616033 WISP2O76076 250 aa10.76□□□□□ -0.69
MSH6-214ENST00000616033 IGKV1-16P04430 117 aa10.76□□□□□ -0.69
MSH6-214ENST00000616033 SLC25A5P05141 298 aaKnown RBP10.76□□□□□ -0.69
MSH6-214ENST00000616033 EIF4EBP1Q13541 118 aaPredicted RBP10.76□□□□□ -0.69
MSH6-214ENST00000616033 OR4F17Q8NGA8 305 aa10.76□□□□□ -0.69
MSH6-214ENST00000616033 SS18L1O75177 396 aaPredicted RBP10.75□□□□□ -0.69
MSH6-214ENST00000616033 IGLV2-8P01709 118 aa10.75□□□□□ -0.69
MSH6-214ENST00000616033 TAS2R45P59539 299 aa10.75□□□□□ -0.69
MSH6-214ENST00000616033 FOXE3Q13461 319 aa10.75□□□□□ -0.69
MSH6-214ENST00000616033 SPRNQ5BIV9 151 aa10.75□□□□□ -0.69
MSH6-214ENST00000616033 C11orf53Q8IXP5 236 aa10.75□□□□□ -0.69
MSH6-214ENST00000616033 TRAV9-1A0A075B6T8 112 aa10.75□□□□□ -0.69
MSH6-214ENST00000616033 SAA2-SAA4A0A096LPE2 208 aa10.75□□□□□ -0.69
MSH6-214ENST00000616033 C7orf71A4D174 169 aa10.75□□□□□ -0.69
MSH6-214ENST00000616033 NBEAP1P0C6P0 100 aa10.75□□□□□ -0.69
MSH6-214ENST00000616033 SAA2P0DJI9 122 aaPredicted RBP10.75□□□□□ -0.69
MSH6-214ENST00000616033 PAX2Q02962 417 aa10.75□□□□□ -0.69
MSH6-214ENST00000616033 TBR1Q16650 682 aa10.75□□□□□ -0.69
MSH6-214ENST00000616033 C10orf55Q5SWW7 151 aa10.75□□□□□ -0.69
MSH6-214ENST00000616033 SLC25A34Q6PIV7 304 aa10.75□□□□□ -0.69
MSH6-214ENST00000616033 C6orf15Q6UXA7 325 aaPredicted RBP10.75□□□□□ -0.69
MSH6-214ENST00000616033 BHLHA15Q7RTS1 189 aaPredicted RBP10.75□□□□□ -0.69
MSH6-214ENST00000616033 OR4S2Q8NH73 311 aa10.75□□□□□ -0.69
MSH6-214ENST00000616033 MRPS16Q9Y3D3 137 aaKnown RBP10.75□□□□□ -0.69
MSH6-214ENST00000616033 TMEM238LA0A1B0GVL6 79 aa10.74□□□□□ -0.69
MSH6-214ENST00000616033 K7EMI3 77 aa10.74□□□□□ -0.69
MSH6-214ENST00000616033 MOSP00540 346 aa10.74□□□□□ -0.69
MSH6-214ENST00000616033 C8orf88P0DMB2 117 aa10.74□□□□□ -0.69
MSH6-214ENST00000616033 IGHV1-2P23083 117 aa10.74□□□□□ -0.69
MSH6-214ENST00000616033 NRN1LQ496H8 165 aa10.74□□□□□ -0.69
MSH6-214ENST00000616033 MOGAT3Q86VF5 341 aa10.74□□□□□ -0.69
MSH6-214ENST00000616033 RBMXL3Q8N7X1 1067 aaKnown RBP10.74□□□□□ -0.69
MSH6-214ENST00000616033 FLYWCH2Q96CP2 140 aaKnown RBP10.74□□□□□ -0.69
MSH6-214ENST00000616033 PRSS46E5RG02 174 aa10.74□□□□□ -0.69
MSH6-214ENST00000616033 CRYBA4P53673 196 aa10.74□□□□□ -0.69
MSH6-214ENST00000616033 PRB3Q04118 309 aaPredicted RBP10.74□□□□□ -0.69
MSH6-214ENST00000616033 ZNF766Q5HY98 468 aa10.74□□□□□ -0.69
MSH6-214ENST00000616033 TEX45Q8NA69 505 aa10.74□□□□□ -0.69
MSH6-214ENST00000616033 C11orf52Q96A22 123 aa10.74□□□□□ -0.69
MSH6-214ENST00000616033 C15orf61A6NNL5 157 aa10.74□□□□□ -0.69
MSH6-214ENST00000616033 CHEK1O14757 476 aa10.74□□□□□ -0.69
MSH6-214ENST00000616033 MUC15Q8N387 334 aa10.74□□□□□ -0.69
MSH6-214ENST00000616033 TRAV8-1A0A0A6YYK1 113 aa10.73□□□□□ -0.69
MSH6-214ENST00000616033 LOC389332A0A1B0GUA5 103 aa10.73□□□□□ -0.69
MSH6-214ENST00000616033 KLK10O43240 276 aa10.73□□□□□ -0.69
MSH6-214ENST00000616033 ADH4P08319 380 aa10.73□□□□□ -0.69
MSH6-214ENST00000616033 NPIPB3Q92617 1050 aa10.73□□□□□ -0.69
MSH6-214ENST00000616033 PAXXQ9BUH6 204 aa10.73□□□□□ -0.69
MSH6-214ENST00000616033 CXXC4Q9H2H0 198 aa10.73□□□□□ -0.69
MSH6-214ENST00000616033 CSMD1Q96PZ7 3565 aa10.73□□□□□ -0.69
MSH6-214ENST00000616033 SMIM27A0A1W2PRY6 76 aa10.73□□□□□ -0.69
MSH6-214ENST00000616033 PGPA6NDG6 321 aa10.73□□□□□ -0.69
MSH6-214ENST00000616033 C2orf70A6NJV1 201 aa10.73□□□□□ -0.69
MSH6-214ENST00000616033 VWC2LB2RUY7 222 aa10.73□□□□□ -0.69
MSH6-214ENST00000616033 LGALS7P47929 136 aa10.73□□□□□ -0.69
MSH6-214ENST00000616033 PEAR1Q5VY43 1037 aaPredicted RBP10.73□□□□□ -0.69
MSH6-214ENST00000616033 IFI27L2Q9H2X8 130 aa10.73□□□□□ -0.69
MSH6-214ENST00000616033 MGAQ8IWI9 3026 aa10.73□□□□□ -0.69
MSH6-214ENST00000616033 PIEZO2Q9H5I5 2752 aa10.73□□□□□ -0.69
MSH6-214ENST00000616033 SPTBN1Q01082 2364 aaKnown RBP10.73□□□□□ -0.69
MSH6-214ENST00000616033 PPIAL4CA0A0B4J2A2 164 aa10.72□□□□□ -0.69
MSH6-214ENST00000616033 C15orf65H3BRN8 121 aa10.72□□□□□ -0.69
MSH6-214ENST00000616033 PPIAL4GP0DN37 164 aa10.72□□□□□ -0.69
MSH6-214ENST00000616033 PRR20EP86478 221 aa10.72□□□□□ -0.69
MSH6-214ENST00000616033 PRR20CP86479 221 aa10.72□□□□□ -0.69
MSH6-214ENST00000616033 PRR20DP86480 221 aa10.72□□□□□ -0.69
MSH6-214ENST00000616033 PRR20BP86481 221 aa10.72□□□□□ -0.69
MSH6-214ENST00000616033 PRR20AP86496 221 aa10.72□□□□□ -0.69
MSH6-214ENST00000616033 CT45A1Q5HYN5 189 aa10.72□□□□□ -0.69
MSH6-214ENST00000616033 WFDC3Q8IUB2 231 aa10.72□□□□□ -0.69
MSH6-214ENST00000616033 CT45A3Q8NHU0 189 aa10.72□□□□□ -0.69
MSH6-214ENST00000616033 DAZAP1Q96EP5 407 aaKnown RBP10.72□□□□□ -0.69
MSH6-214ENST00000616033 OR2V2Q96R30 315 aa10.72□□□□□ -0.69
MSH6-214ENST00000616033 IDI2-AS1Q9NZ38 188 aa10.72□□□□□ -0.69
MSH6-214ENST00000616033 ADGRG4Q8IZF6 3080 aa10.72□□□□□ -0.69
MSH6-214ENST00000616033 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.72□□□□□ -0.69
MSH6-214ENST00000616033 CKS1BP61024 79 aa10.72□□□□□ -0.69
MSH6-214ENST00000616033 OR8A1Q8NGG7 326 aa10.72□□□□□ -0.69
MSH6-214ENST00000616033 CHODLQ9H9P2 273 aa10.72□□□□□ -0.69
MSH6-214ENST00000616033 CALYQ9NYX4 217 aa10.72□□□□□ -0.69
MSH6-214ENST00000616033 SPENQ96T58 3664 aaKnown RBP10.72□□□□□ -0.69
MSH6-214ENST00000616033 A0A1W2PRE2 83 aa10.72□□□□□ -0.69
MSH6-214ENST00000616033 SRRM4A7MD48 611 aaKnown RBP10.72□□□□□ -0.69
MSH6-214ENST00000616033 SP1P08047 785 aa10.72□□□□□ -0.69
MSH6-214ENST00000616033 TMEM177Q53S58 311 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms