RNA–Protein interactions for RNA: ENST00000614971.4

LTN1-207, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,756 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-207ENST00000614971 CD8AP01732 235 aa3.13□□□□□ -1.91
LTN1-207ENST00000614971 APCSP02743 223 aa3.13□□□□□ -1.91
LTN1-207ENST00000614971 GPX1P07203 203 aa3.13□□□□□ -1.91
LTN1-207ENST00000614971 NSUN5P1Q3KNT7 163 aa3.13□□□□□ -1.91
LTN1-207ENST00000614971 DNM1P46Q6ZS02 220 aa3.13□□□□□ -1.91
LTN1-207ENST00000614971 TMEM116Q8NCL8 245 aa3.13□□□□□ -1.91
LTN1-207ENST00000614971 ZNF502Q8TBZ5 544 aa3.13□□□□□ -1.91
LTN1-207ENST00000614971 ARPC1AQ92747 370 aa3.13□□□□□ -1.91
LTN1-207ENST00000614971 SEPSECSQ9HD40 501 aaKnown RBP3.13□□□□□ -1.91
LTN1-207ENST00000614971 LINC00312Q9Y6C7 94 aa3.13□□□□□ -1.91
LTN1-207ENST00000614971 TMEM178BH3BS89 294 aa3.12□□□□□ -1.91
LTN1-207ENST00000614971 K7ENP7 123 aa3.12□□□□□ -1.91
LTN1-207ENST00000614971 RHOGP84095 191 aa3.12□□□□□ -1.91
LTN1-207ENST00000614971 ATP5G2Q06055 141 aa3.12□□□□□ -1.91
LTN1-207ENST00000614971 TCF24Q7RTU0 167 aa3.12□□□□□ -1.91
LTN1-207ENST00000614971 IFI27L2Q9H2X8 130 aa3.12□□□□□ -1.91
LTN1-207ENST00000614971 CBLN4Q9NTU7 201 aa3.12□□□□□ -1.91
LTN1-207ENST00000614971 C21orf62Q9NYP8 219 aa3.12□□□□□ -1.91
LTN1-207ENST00000614971 IGHV2-26A0A0B4J1V2 119 aa3.12□□□□□ -1.91
LTN1-207ENST00000614971 IGKV3D-20A0A0C4DH25 116 aa3.12□□□□□ -1.91
LTN1-207ENST00000614971 PDE6DO43924 150 aa3.12□□□□□ -1.91
LTN1-207ENST00000614971 NPPCP23582 126 aa3.12□□□□□ -1.91
LTN1-207ENST00000614971 TIMP3P35625 211 aa3.12□□□□□ -1.91
LTN1-207ENST00000614971 Q6ZN92 141 aa3.12□□□□□ -1.91
LTN1-207ENST00000614971 VMO1Q7Z5L0 202 aa3.12□□□□□ -1.91
LTN1-207ENST00000614971 KCNS1Q96KK3 526 aa3.12□□□□□ -1.91
LTN1-207ENST00000614971 CKS2P33552 79 aa3.12□□□□□ -1.91
LTN1-207ENST00000614971 HIST2H2BCQ6DN03 193 aa3.12□□□□□ -1.91
LTN1-207ENST00000614971 CYP2G1PQ6ZSU1 146 aa3.12□□□□□ -1.91
LTN1-207ENST00000614971 Q8TAT8 98 aa3.12□□□□□ -1.91
LTN1-207ENST00000614971 SMIM8Q96KF7 97 aa3.12□□□□□ -1.91
LTN1-207ENST00000614971 OBSL1O75147 1896 aa3.12□□□□□ -1.91
LTN1-207ENST00000614971 TMEM189A5PLL7 270 aa3.12□□□□□ -1.91
LTN1-207ENST00000614971 ZZEF1O43149 2961 aa3.12□□□□□ -1.91
LTN1-207ENST00000614971 ACAA1P09110 424 aaPredicted RBP3.12□□□□□ -1.91
LTN1-207ENST00000614971 UCP3P55916 312 aa3.12□□□□□ -1.91
LTN1-207ENST00000614971 FAM166AQ6J272 317 aa3.12□□□□□ -1.91
LTN1-207ENST00000614971 FAM71F2Q6NXP2 309 aa3.12□□□□□ -1.91
LTN1-207ENST00000614971 C1QL4Q86Z23 238 aa3.12□□□□□ -1.91
LTN1-207ENST00000614971 TPSG1Q9NRR2 321 aa3.12□□□□□ -1.91
LTN1-207ENST00000614971 MBNL3Q9NUK0 354 aaKnown RBP3.12□□□□□ -1.91
LTN1-207ENST00000614971 MRPS18CQ9Y3D5 142 aaKnown RBP3.12□□□□□ -1.91
LTN1-207ENST00000614971 F11RQ9Y624 299 aaKnown RBP3.12□□□□□ -1.91
LTN1-207ENST00000614971 NUP210Q8TEM1 1887 aaPredicted RBP3.12□□□□□ -1.91
LTN1-207ENST00000614971 PMS2P5A8MQ11 134 aa3.12□□□□□ -1.91
LTN1-207ENST00000614971 PF4P02776 101 aa3.12□□□□□ -1.91
LTN1-207ENST00000614971 TRGC1P0CF51 173 aa3.12□□□□□ -1.91
LTN1-207ENST00000614971 HIST1H1EP10412 219 aaKnown RBP3.12□□□□□ -1.91
LTN1-207ENST00000614971 PAFAH1B2P68402 229 aa3.12□□□□□ -1.91
LTN1-207ENST00000614971 CX3CL1P78423 397 aa3.12□□□□□ -1.91
LTN1-207ENST00000614971 PMCHL1Q16048 86 aa3.12□□□□□ -1.91
LTN1-207ENST00000614971 HIST2H2BDQ6DRA6 164 aa3.12□□□□□ -1.91
LTN1-207ENST00000614971 BEX4Q9NWD9 120 aaPredicted RBP3.12□□□□□ -1.91
LTN1-207ENST00000614971 MSRB2Q9Y3D2 182 aa3.12□□□□□ -1.91
LTN1-207ENST00000614971 LSM4Q9Y4Z0 139 aaKnown RBP3.12□□□□□ -1.91
LTN1-207ENST00000614971 PHLDA3Q9Y5J5 127 aa3.12□□□□□ -1.91
LTN1-207ENST00000614971 ZNF106Q9H2Y7 1883 aaKnown RBP3.12□□□□□ -1.91
LTN1-207ENST00000614971 G3V318 75 aa3.12□□□□□ -1.91
LTN1-207ENST00000614971 M0R3E3 92 aa3.12□□□□□ -1.91
LTN1-207ENST00000614971 QRFPP83859 136 aa3.12□□□□□ -1.91
LTN1-207ENST00000614971 PNRC1Q12796 327 aaPredicted RBP3.12□□□□□ -1.91
LTN1-207ENST00000614971 ZNF146Q15072 292 aa3.12□□□□□ -1.91
LTN1-207ENST00000614971 OR52E5Q8NH55 327 aa3.12□□□□□ -1.91
LTN1-207ENST00000614971 SCRT1Q9BWW7 348 aa3.12□□□□□ -1.91
LTN1-207ENST00000614971 MRPL18Q9H0U6 180 aaKnown RBP3.12□□□□□ -1.91
LTN1-207ENST00000614971 RPUSD1Q9UJJ7 312 aaKnown RBP3.12□□□□□ -1.91
LTN1-207ENST00000614971 WIPF3A6NGB9 483 aa3.11□□□□□ -1.91
LTN1-207ENST00000614971 IGHV1-8P0DP01 117 aa3.11□□□□□ -1.91
LTN1-207ENST00000614971 MEOX2P50222 304 aa3.11□□□□□ -1.91
LTN1-207ENST00000614971 Q6P435 159 aa3.11□□□□□ -1.91
LTN1-207ENST00000614971 SFTA2Q6UW10 78 aa3.11□□□□□ -1.91
LTN1-207ENST00000614971 SCGB1D4Q6XE38 83 aa3.11□□□□□ -1.91
LTN1-207ENST00000614971 OR10J6PQ8NGY7 276 aa3.11□□□□□ -1.91
LTN1-207ENST00000614971 MCRIP2Q9BUT9 160 aaKnown RBP3.11□□□□□ -1.91
LTN1-207ENST00000614971 A0A087X0M5 115 aa3.11□□□□□ -1.91
LTN1-207ENST00000614971 IGHV3-73A0A0B4J1V6 119 aa3.11□□□□□ -1.91
LTN1-207ENST00000614971 A0A1B0GX30 115 aa3.11□□□□□ -1.91
LTN1-207ENST00000614971 MBD3L4A6NDZ8 208 aaPredicted RBP3.11□□□□□ -1.91
LTN1-207ENST00000614971 MBD3L3A6NE82 208 aaPredicted RBP3.11□□□□□ -1.91
LTN1-207ENST00000614971 MBD3L5A6NJ08 208 aaPredicted RBP3.11□□□□□ -1.91
LTN1-207ENST00000614971 NPIPB5A8MRT5 1133 aa3.11□□□□□ -1.91
LTN1-207ENST00000614971 TM4SF5O14894 197 aa3.11□□□□□ -1.91
LTN1-207ENST00000614971 NBR2O15453 112 aa3.11□□□□□ -1.91
LTN1-207ENST00000614971 GCGP01275 180 aa3.11□□□□□ -1.91
LTN1-207ENST00000614971 SOD3P08294 240 aa3.11□□□□□ -1.91
LTN1-207ENST00000614971 C15orf32Q32M92 178 aa3.11□□□□□ -1.91
LTN1-207ENST00000614971 MBD3L2Q8NHZ7 208 aaPredicted RBP3.11□□□□□ -1.91
LTN1-207ENST00000614971 C18orf12Q96KH6 178 aa3.11□□□□□ -1.91
LTN1-207ENST00000614971 DUX3Q96PT4 197 aa3.11□□□□□ -1.91
LTN1-207ENST00000614971 ZMAT5Q9UDW3 170 aaKnown RBP3.11□□□□□ -1.91
LTN1-207ENST00000614971 ATMQ13315 3056 aa3.11□□□□□ -1.91
LTN1-207ENST00000614971 SPTBN5Q9NRC6 3674 aaKnown RBP3.11□□□□□ -1.91
LTN1-207ENST00000614971 HCFC1P51610 2035 aa3.11□□□□□ -1.91
LTN1-207ENST00000614971 TEX50A0A1B0GTY4 177 aa3.11□□□□□ -1.91
LTN1-207ENST00000614971 EBLN2Q6P2I7 272 aa3.11□□□□□ -1.91
LTN1-207ENST00000614971 RPP25LQ8N5L8 163 aaKnown RBP3.11□□□□□ -1.91
LTN1-207ENST00000614971 OSR1Q8TAX0 266 aaPredicted RBP3.11□□□□□ -1.91
LTN1-207ENST00000614971 C1orf147Q96MC9 270 aaPredicted RBP3.11□□□□□ -1.91
LTN1-207ENST00000614971 GAFA1Q96PS6 74 aa3.11□□□□□ -1.91
LTN1-207ENST00000614971 TMEM50AO95807 157 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms