RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 C8orf86Q6ZUL3 223 aa11.35□□□□□ -0.59
CD48-203ENST00000613788 OR1N2Q8NGR9 330 aa11.35□□□□□ -0.59
CD48-203ENST00000613788 ZFP92A6NM28 416 aa11.34□□□□□ -0.59
CD48-203ENST00000613788 GGCTO75223 188 aaKnown RBP11.34□□□□□ -0.59
CD48-203ENST00000613788 CTSGP08311 255 aa11.34□□□□□ -0.59
CD48-203ENST00000613788 OR10J1P30954 320 aa11.34□□□□□ -0.59
CD48-203ENST00000613788 CLINT1Q14677 625 aa11.34□□□□□ -0.59
CD48-203ENST00000613788 VWC2Q2TAL6 325 aa11.34□□□□□ -0.59
CD48-203ENST00000613788 TEPPQ6URK8 271 aa11.34□□□□□ -0.59
CD48-203ENST00000613788 OR11H1Q8NG94 326 aa11.34□□□□□ -0.59
CD48-203ENST00000613788 ATP5SQ99766 215 aa11.34□□□□□ -0.59
CD48-203ENST00000613788 A0A0D9SG52 128 aa11.33□□□□□ -0.6
CD48-203ENST00000613788 PPP5D1E7EU14 171 aa11.33□□□□□ -0.6
CD48-203ENST00000613788 LINC01619G3V211 115 aa11.33□□□□□ -0.6
CD48-203ENST00000613788 CCL24O00175 119 aa11.33□□□□□ -0.6
CD48-203ENST00000613788 TRBV12-3P01733 135 aa11.33□□□□□ -0.6
CD48-203ENST00000613788 ZP3P21754 424 aa11.33□□□□□ -0.6
CD48-203ENST00000613788 RELQ04864 619 aaPredicted RBP11.33□□□□□ -0.6
CD48-203ENST00000613788 ZNF616Q08AN1 781 aa11.33□□□□□ -0.6
CD48-203ENST00000613788 ZNF345Q14585 488 aa11.33□□□□□ -0.6
CD48-203ENST00000613788 DEFB136Q30KP8 78 aa11.33□□□□□ -0.6
CD48-203ENST00000613788 TREML4Q6UXN2 200 aa11.33□□□□□ -0.6
CD48-203ENST00000613788 THAP8Q8NA92 274 aa11.33□□□□□ -0.6
CD48-203ENST00000613788 OR4F17Q8NGA8 305 aa11.33□□□□□ -0.6
CD48-203ENST00000613788 OR4F4Q96R69 305 aa11.33□□□□□ -0.6
CD48-203ENST00000613788 SMIM3Q9BZL3 60 aa11.33□□□□□ -0.6
CD48-203ENST00000613788 IGHV4OR15-8A0A075B7B6 117 aa11.32□□□□□ -0.6
CD48-203ENST00000613788 A0A087WW49 117 aa11.32□□□□□ -0.6
CD48-203ENST00000613788 BMPR1BO00238 502 aa11.32□□□□□ -0.6
CD48-203ENST00000613788 IFNA5P01569 189 aa11.32□□□□□ -0.6
CD48-203ENST00000613788 FABP1P07148 127 aa11.32□□□□□ -0.6
CD48-203ENST00000613788 IGLC1P0CG04 106 aa11.32□□□□□ -0.6
CD48-203ENST00000613788 MYCNOSP40205 109 aa11.32□□□□□ -0.6
CD48-203ENST00000613788 EIF2B2P49770 351 aaKnown RBP11.32□□□□□ -0.6
CD48-203ENST00000613788 RAB31Q13636 194 aa11.32□□□□□ -0.6
CD48-203ENST00000613788 RPEL1Q2QD12 228 aa11.32□□□□□ -0.6
CD48-203ENST00000613788 KCNRGQ8N5I3 272 aa11.32□□□□□ -0.6
CD48-203ENST00000613788 RAX2Q96IS3 184 aa11.32□□□□□ -0.6
CD48-203ENST00000613788 CHRDL1Q9BU40 450 aa11.32□□□□□ -0.6
CD48-203ENST00000613788 FBXL17Q9UF56 701 aa11.32□□□□□ -0.6
CD48-203ENST00000613788 WDR83OSQ9Y284 106 aa11.32□□□□□ -0.6
CD48-203ENST00000613788 TAAR5O14804 337 aa11.31□□□□□ -0.6
CD48-203ENST00000613788 OR2C1O95371 312 aa11.31□□□□□ -0.6
CD48-203ENST00000613788 ADMP35318 185 aa11.31□□□□□ -0.6
CD48-203ENST00000613788 YPEL3P61236 119 aaPredicted RBP11.31□□□□□ -0.6
CD48-203ENST00000613788 ZNF266Q14584 549 aa11.31□□□□□ -0.6
CD48-203ENST00000613788 TIGITQ495A1 244 aa11.31□□□□□ -0.6
CD48-203ENST00000613788 TRGV9Q99603 122 aa11.31□□□□□ -0.6
CD48-203ENST00000613788 IGKV1OR2-108A0A075B7D4 117 aa11.3□□□□□ -0.6
CD48-203ENST00000613788 UBE2L5PA0A1B0GUS4 154 aa11.3□□□□□ -0.6
CD48-203ENST00000613788 MPDU1O75352 247 aa11.3□□□□□ -0.6
CD48-203ENST00000613788 IGKV1-17P01599 117 aa11.3□□□□□ -0.6
CD48-203ENST00000613788 FAM106AQ4KMX7 169 aa11.3□□□□□ -0.6
CD48-203ENST00000613788 BTNL8Q6UX41 500 aa11.3□□□□□ -0.6
CD48-203ENST00000613788 ZNF600Q6ZNG1 722 aa11.3□□□□□ -0.6
CD48-203ENST00000613788 GPHB5Q86YW7 130 aa11.3□□□□□ -0.6
CD48-203ENST00000613788 SCGB1C1Q8TD33 95 aa11.3□□□□□ -0.6
CD48-203ENST00000613788 Q8WTZ3 238 aa11.3□□□□□ -0.6
CD48-203ENST00000613788 DUX3Q96PT4 197 aa11.3□□□□□ -0.6
CD48-203ENST00000613788 LSM4Q9Y4Z0 139 aaKnown RBP11.3□□□□□ -0.6
CD48-203ENST00000613788 IGKV1D-37A0A075B6S9 117 aa11.3□□□□□ -0.6
CD48-203ENST00000613788 BORCS7-ASMTA0A0B4J1R7 106 aa11.3□□□□□ -0.6
CD48-203ENST00000613788 M0QZ24 198 aa11.3□□□□□ -0.6
CD48-203ENST00000613788 PF4P02776 101 aa11.3□□□□□ -0.6
CD48-203ENST00000613788 RD3LP0DJH9 198 aa11.3□□□□□ -0.6
CD48-203ENST00000613788 CXCL2P19875 107 aa11.3□□□□□ -0.6
CD48-203ENST00000613788 FGF7P21781 194 aa11.3□□□□□ -0.6
CD48-203ENST00000613788 HOXD3P31249 432 aaPredicted RBP11.3□□□□□ -0.6
CD48-203ENST00000613788 SELENOTP62341 195 aa11.3□□□□□ -0.6
CD48-203ENST00000613788 FHL3Q13643 280 aa11.3□□□□□ -0.6
CD48-203ENST00000613788 ARPC5LQ9BPX5 153 aa11.3□□□□□ -0.6
CD48-203ENST00000613788 ARL6Q9H0F7 186 aa11.3□□□□□ -0.6
CD48-203ENST00000613788 WFDC1Q9HC57 220 aa11.3□□□□□ -0.6
CD48-203ENST00000613788 COL6A5A8TX70 2615 aa11.29□□□□□ -0.6
CD48-203ENST00000613788 KANTRA0A1W2PQU2 76 aa11.29□□□□□ -0.6
CD48-203ENST00000613788 NDUFA4O00483 81 aa11.29□□□□□ -0.6
CD48-203ENST00000613788 JTBO76095 146 aa11.29□□□□□ -0.6
CD48-203ENST00000613788 TOMM40O96008 361 aa11.29□□□□□ -0.6
CD48-203ENST00000613788 CFDP00746 253 aaPredicted RBP11.29□□□□□ -0.6
CD48-203ENST00000613788 CAMLGP49069 296 aa11.29□□□□□ -0.6
CD48-203ENST00000613788 ZNF90Q03938 601 aa11.29□□□□□ -0.6
CD48-203ENST00000613788 LGALSLQ3ZCW2 172 aaPredicted RBP11.29□□□□□ -0.6
CD48-203ENST00000613788 CYP2G1PQ6ZSU1 146 aa11.29□□□□□ -0.6
CD48-203ENST00000613788 TMUB2Q71RG4 321 aa11.29□□□□□ -0.6
CD48-203ENST00000613788 PARD6GQ9BYG4 376 aaPredicted RBP11.29□□□□□ -0.6
CD48-203ENST00000613788 WDR61Q9GZS3 305 aaKnown RBP11.29□□□□□ -0.6
CD48-203ENST00000613788 IGHV3-35A0A0C4DH35 117 aa11.28□□□□□ -0.6
CD48-203ENST00000613788 AGPAT2O15120 278 aa11.28□□□□□ -0.6
CD48-203ENST00000613788 YIF1AO95070 293 aa11.28□□□□□ -0.6
CD48-203ENST00000613788 PSG1P11464 419 aa11.28□□□□□ -0.6
CD48-203ENST00000613788 SLURP1P55000 103 aa11.28□□□□□ -0.6
CD48-203ENST00000613788 KLF5Q13887 457 aaPredicted RBP11.28□□□□□ -0.6
CD48-203ENST00000613788 C1QL4Q86Z23 238 aa11.28□□□□□ -0.6
CD48-203ENST00000613788 ZNF709Q8N972 641 aa11.28□□□□□ -0.6
CD48-203ENST00000613788 MGST2Q99735 147 aa11.28□□□□□ -0.6
CD48-203ENST00000613788 PUS1Q9Y606 427 aaKnown RBP eCLIP11.28□□□□□ -0.6
CD48-203ENST00000613788 TENM1Q9UKZ4 2725 aa11.28□□□□□ -0.6
CD48-203ENST00000613788 ZNF320A2RRD8 509 aa11.27□□□□□ -0.61
CD48-203ENST00000613788 C17orf112F2Z3M2 114 aa11.27□□□□□ -0.61
CD48-203ENST00000613788 LGALS9O00182 355 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms