RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 AKAP13Q12802 2813 aa8.95□□□□□ -0.98
FAM3A-221ENST00000612856 TRAV24A0A0B4J272 114 aa8.95□□□□□ -0.98
FAM3A-221ENST00000612856 BMPR1BO00238 502 aa8.95□□□□□ -0.98
FAM3A-221ENST00000612856 HYPMO75409 117 aa8.95□□□□□ -0.98
FAM3A-221ENST00000612856 RPEL1Q2QD12 228 aa8.95□□□□□ -0.98
FAM3A-221ENST00000612856 TIGITQ495A1 244 aa8.95□□□□□ -0.98
FAM3A-221ENST00000612856 OR9G1Q8NH87 305 aa8.95□□□□□ -0.98
FAM3A-221ENST00000612856 FAM222BQ8WU58 562 aa8.95□□□□□ -0.98
FAM3A-221ENST00000612856 TMEM250H0YL14 139 aa8.94□□□□□ -0.98
FAM3A-221ENST00000612856 RPL27AP46776 148 aaKnown RBP8.94□□□□□ -0.98
FAM3A-221ENST00000612856 PPOXP50336 477 aa8.94□□□□□ -0.98
FAM3A-221ENST00000612856 ARL16Q0P5N6 197 aa8.94□□□□□ -0.98
FAM3A-221ENST00000612856 MPV17L2Q567V2 206 aa8.94□□□□□ -0.98
FAM3A-221ENST00000612856 SGK494Q96LW2 274 aa8.94□□□□□ -0.98
FAM3A-221ENST00000612856 CHRDL1Q9BU40 450 aa8.94□□□□□ -0.98
FAM3A-221ENST00000612856 CST9LQ9H4G1 147 aa8.94□□□□□ -0.98
FAM3A-221ENST00000612856 COX11Q9Y6N1 276 aa8.94□□□□□ -0.98
FAM3A-221ENST00000612856 PGLYRP1O75594 196 aaPredicted RBP8.94□□□□□ -0.98
FAM3A-221ENST00000612856 CSN3P07498 182 aa8.94□□□□□ -0.98
FAM3A-221ENST00000612856 CDKN1BP46527 198 aa8.94□□□□□ -0.98
FAM3A-221ENST00000612856 NHLRC2Q8NBF2 726 aa8.94□□□□□ -0.98
FAM3A-221ENST00000612856 PMCHL2Q9BQD1 86 aa8.94□□□□□ -0.98
FAM3A-221ENST00000612856 IGKV3-20P01619 116 aa8.94□□□□□ -0.98
FAM3A-221ENST00000612856 OCIAD2Q56VL3 154 aa8.94□□□□□ -0.98
FAM3A-221ENST00000612856 TRAT1Q6PIZ9 186 aa8.94□□□□□ -0.98
FAM3A-221ENST00000612856 FAM89BQ8N5H3 189 aa8.94□□□□□ -0.98
FAM3A-221ENST00000612856 RNF138Q8WVD3 245 aa8.94□□□□□ -0.98
FAM3A-221ENST00000612856 A0A0G2JRQ6 117 aa8.93□□□□□ -0.98
FAM3A-221ENST00000612856 A0A1W2PN81 502 aa8.93□□□□□ -0.98
FAM3A-221ENST00000612856 PRSS47A8MTI9 375 aa8.93□□□□□ -0.98
FAM3A-221ENST00000612856 C17orf98A8MV24 154 aa8.93□□□□□ -0.98
FAM3A-221ENST00000612856 FAM106CPP0CH98 169 aa8.93□□□□□ -0.98
FAM3A-221ENST00000612856 TFF3Q07654 80 aa8.93□□□□□ -0.98
FAM3A-221ENST00000612856 C10orf55Q5SWW7 151 aa8.93□□□□□ -0.98
FAM3A-221ENST00000612856 NEU4Q8WWR8 484 aaPredicted RBP8.93□□□□□ -0.98
FAM3A-221ENST00000612856 DMXL2Q8TDJ6 3036 aa8.93□□□□□ -0.98
FAM3A-221ENST00000612856 ID3Q02535 119 aa8.93□□□□□ -0.98
FAM3A-221ENST00000612856 ZNF788Q6ZQV5 615 aa8.93□□□□□ -0.98
FAM3A-221ENST00000612856 ZNF329Q86UD4 541 aa8.93□□□□□ -0.98
FAM3A-221ENST00000612856 MMD2Q8IY49 270 aa8.93□□□□□ -0.98
FAM3A-221ENST00000612856 OR5B3Q8NH48 314 aa8.93□□□□□ -0.98
FAM3A-221ENST00000612856 ORAOV1Q8WV07 137 aa8.93□□□□□ -0.98
FAM3A-221ENST00000612856 MCRIP2Q9BUT9 160 aaKnown RBP8.93□□□□□ -0.98
FAM3A-221ENST00000612856 MRPL20Q9BYC9 149 aaKnown RBP8.93□□□□□ -0.98
FAM3A-221ENST00000612856 OR51B2Q9Y5P1 312 aa8.93□□□□□ -0.98
FAM3A-221ENST00000612856 OR2T8A6NH00 312 aa8.93□□□□□ -0.98
FAM3A-221ENST00000612856 CIDEAO60543 219 aa8.93□□□□□ -0.98
FAM3A-221ENST00000612856 CFPP27918 469 aa8.93□□□□□ -0.98
FAM3A-221ENST00000612856 COMPP49747 757 aaPredicted RBP8.93□□□□□ -0.98
FAM3A-221ENST00000612856 LOXL3P58215 753 aa8.93□□□□□ -0.98
FAM3A-221ENST00000612856 RHOBP62745 196 aa8.93□□□□□ -0.98
FAM3A-221ENST00000612856 Q6ZR03 302 aa8.93□□□□□ -0.98
FAM3A-221ENST00000612856 LHFPL4Q7Z7J7 247 aa8.93□□□□□ -0.98
FAM3A-221ENST00000612856 STPG3Q8N7X2 389 aa8.93□□□□□ -0.98
FAM3A-221ENST00000612856 QTRT1Q9BXR0 403 aaKnown RBP8.93□□□□□ -0.98
FAM3A-221ENST00000612856 PXMP4Q9Y6I8 212 aa8.93□□□□□ -0.98
FAM3A-221ENST00000612856 DCHS1Q96JQ0 3298 aa8.92□□□□□ -0.98
FAM3A-221ENST00000612856 SCO2A0A1W2PP80 73 aa8.92□□□□□ -0.98
FAM3A-221ENST00000612856 NPY1RP25929 384 aa8.92□□□□□ -0.98
FAM3A-221ENST00000612856 TSPOP30536 169 aa8.92□□□□□ -0.98
FAM3A-221ENST00000612856 GNG4P50150 75 aa8.92□□□□□ -0.98
FAM3A-221ENST00000612856 CCDC144NLQ6NUI1 221 aa8.92□□□□□ -0.98
FAM3A-221ENST00000612856 C22orf34Q6ZV56 151 aa8.92□□□□□ -0.98
FAM3A-221ENST00000612856 SEM1Q6ZVN7 128 aa8.92□□□□□ -0.98
FAM3A-221ENST00000612856 SSX8Q7RTT4 187 aa8.92□□□□□ -0.98
FAM3A-221ENST00000612856 DPM3Q9P2X0 92 aa8.92□□□□□ -0.98
FAM3A-221ENST00000612856 NCKAP5O14513 1909 aa8.92□□□□□ -0.98
FAM3A-221ENST00000612856 TMEM238C9JI98 176 aa8.92□□□□□ -0.98
FAM3A-221ENST00000612856 IGKV3-15P01624 115 aa8.92□□□□□ -0.98
FAM3A-221ENST00000612856 LINC01551Q86U37 167 aa8.92□□□□□ -0.98
FAM3A-221ENST00000612856 VSTM2AQ8TAG5 236 aa8.92□□□□□ -0.98
FAM3A-221ENST00000612856 Q96MF0 132 aa8.92□□□□□ -0.98
FAM3A-221ENST00000612856 FNDC4Q9H6D8 234 aaPredicted RBP8.92□□□□□ -0.98
FAM3A-221ENST00000612856 TMEM140Q9NV12 185 aa8.92□□□□□ -0.98
FAM3A-221ENST00000612856 CPAMD8Q8IZJ3 1885 aa8.92□□□□□ -0.98
FAM3A-221ENST00000612856 IGHV3OR16-12A0A075B7B8 117 aa8.92□□□□□ -0.98
FAM3A-221ENST00000612856 TMEM8BA6NDV4 472 aa8.92□□□□□ -0.98
FAM3A-221ENST00000612856 C3orf79P0CE67 100 aa8.92□□□□□ -0.98
FAM3A-221ENST00000612856 ARL3P36405 182 aa8.92□□□□□ -0.98
FAM3A-221ENST00000612856 EFNA4P52798 201 aa8.92□□□□□ -0.98
FAM3A-221ENST00000612856 LRRC75BQ2VPJ9 315 aa8.92□□□□□ -0.98
FAM3A-221ENST00000612856 OR1L8Q8NGR8 309 aa8.92□□□□□ -0.98
FAM3A-221ENST00000612856 FAM216AQ8WUB2 273 aa8.92□□□□□ -0.98
FAM3A-221ENST00000612856 TMEM147Q9BVK8 224 aa8.92□□□□□ -0.98
FAM3A-221ENST00000612856 FBLN5Q9UBX5 448 aa8.92□□□□□ -0.98
FAM3A-221ENST00000612856 RPL8P62917 257 aaKnown RBP8.91□□□□□ -0.98
FAM3A-221ENST00000612856 CD177Q8N6Q3 437 aa8.91□□□□□ -0.98
FAM3A-221ENST00000612856 OR1L4Q8NGR5 311 aa8.91□□□□□ -0.98
FAM3A-221ENST00000612856 OCC1Q8TAD7 63 aa8.91□□□□□ -0.98
FAM3A-221ENST00000612856 THYN1Q9P016 225 aa8.91□□□□□ -0.98
FAM3A-221ENST00000612856 OR2J3O76001 311 aa8.91□□□□□ -0.98
FAM3A-221ENST00000612856 IGLC2P0DOY2 106 aa8.91□□□□□ -0.98
FAM3A-221ENST00000612856 IGLC3P0DOY3 106 aa8.91□□□□□ -0.98
FAM3A-221ENST00000612856 MFAP2P55001 183 aa8.91□□□□□ -0.98
FAM3A-221ENST00000612856 SPRNQ5BIV9 151 aa8.91□□□□□ -0.98
FAM3A-221ENST00000612856 KLF17Q5JT82 389 aaPredicted RBP8.91□□□□□ -0.98
FAM3A-221ENST00000612856 ZNF114Q8NC26 417 aa8.91□□□□□ -0.98
FAM3A-221ENST00000612856 GAGE12BA1L429 117 aa8.91□□□□□ -0.98
FAM3A-221ENST00000612856 SMAGPQ0VAQ4 97 aa8.91□□□□□ -0.98
FAM3A-221ENST00000612856 COA6Q5JTJ3 125 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms