RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 ESDP10768 282 aa11.85□□□□□ -0.51
CDH1-213ENST00000612417 ZNF25P17030 456 aaPredicted RBP11.85□□□□□ -0.51
CDH1-213ENST00000612417 ERVFC1-1P60608 527 aa11.85□□□□□ -0.51
CDH1-213ENST00000612417 MLANAQ16655 118 aa11.85□□□□□ -0.51
CDH1-213ENST00000612417 MMD2Q8IY49 270 aa11.85□□□□□ -0.51
CDH1-213ENST00000612417 OSTCQ9NRP0 149 aa11.85□□□□□ -0.51
CDH1-213ENST00000612417 CBLN1P23435 193 aa11.84□□□□□ -0.51
CDH1-213ENST00000612417 OR10X1Q8NGY0 326 aa11.84□□□□□ -0.51
CDH1-213ENST00000612417 FAM167A-AS1Q96KT0 104 aa11.84□□□□□ -0.51
CDH1-213ENST00000612417 NAV3Q8IVL0 2385 aa11.84□□□□□ -0.51
CDH1-213ENST00000612417 CGB1A6NKQ9 187 aa11.83□□□□□ -0.51
CDH1-213ENST00000612417 ZNF705GA8MUZ8 300 aaPredicted RBP11.83□□□□□ -0.51
CDH1-213ENST00000612417 E7EUB6 86 aa11.83□□□□□ -0.51
CDH1-213ENST00000612417 IGLV2-23P01705 113 aa11.83□□□□□ -0.51
CDH1-213ENST00000612417 DLX6P56179 175 aa11.83□□□□□ -0.51
CDH1-213ENST00000612417 TIGITQ495A1 244 aa11.83□□□□□ -0.51
CDH1-213ENST00000612417 MRPL18Q9H0U6 180 aaKnown RBP11.83□□□□□ -0.51
CDH1-213ENST00000612417 UBTD1Q9HAC8 227 aa11.83□□□□□ -0.51
CDH1-213ENST00000612417 KAAG1Q9UBP8 84 aa11.83□□□□□ -0.51
CDH1-213ENST00000612417 WASHC3Q9Y3C0 194 aa11.83□□□□□ -0.51
CDH1-213ENST00000612417 EPG5Q9HCE0 2579 aa11.83□□□□□ -0.52
CDH1-213ENST00000612417 A0A1B0GUS0 222 aa11.83□□□□□ -0.52
CDH1-213ENST00000612417 NDUFS8O00217 210 aa11.83□□□□□ -0.52
CDH1-213ENST00000612417 ISLRO14498 428 aa11.83□□□□□ -0.52
CDH1-213ENST00000612417 NUPR1O60356 82 aa11.83□□□□□ -0.52
CDH1-213ENST00000612417 LY6HO94772 140 aa11.83□□□□□ -0.52
CDH1-213ENST00000612417 WT1-ASQ06250 92 aa11.83□□□□□ -0.52
CDH1-213ENST00000612417 OR5I1Q13606 314 aa11.83□□□□□ -0.52
CDH1-213ENST00000612417 OR1L6Q8NGR2 347 aa11.83□□□□□ -0.52
CDH1-213ENST00000612417 IGF2BP2-AS1Q96M15 143 aa11.83□□□□□ -0.52
CDH1-213ENST00000612417 BBC3Q96PG8 261 aaPredicted RBP11.83□□□□□ -0.52
CDH1-213ENST00000612417 SLC25A2Q9BXI2 301 aa11.83□□□□□ -0.52
CDH1-213ENST00000612417 GNB1LQ9BYB4 327 aa11.83□□□□□ -0.52
CDH1-213ENST00000612417 DNAJC4Q9NNZ3 241 aa11.83□□□□□ -0.52
CDH1-213ENST00000612417 TP53TG3Q9ULZ0 132 aa11.83□□□□□ -0.52
CDH1-213ENST00000612417 IGLV2-8P01709 118 aa11.82□□□□□ -0.52
CDH1-213ENST00000612417 REG1BP48304 166 aa11.82□□□□□ -0.52
CDH1-213ENST00000612417 SUB1P53999 127 aaKnown RBP eCLIP11.82□□□□□ -0.52
CDH1-213ENST00000612417 RPL19P84098 196 aaKnown RBP11.82□□□□□ -0.52
CDH1-213ENST00000612417 CMTM2Q8TAZ6 248 aa11.82□□□□□ -0.52
CDH1-213ENST00000612417 FLNCQ14315 2725 aa11.82□□□□□ -0.52
CDH1-213ENST00000612417 MT-ND6P03923 174 aa11.82□□□□□ -0.52
CDH1-213ENST00000612417 SUMO1P63165 101 aaKnown RBP11.82□□□□□ -0.52
CDH1-213ENST00000612417 PAFAH1B2P68402 229 aa11.82□□□□□ -0.52
CDH1-213ENST00000612417 CX3CL1P78423 397 aa11.82□□□□□ -0.52
CDH1-213ENST00000612417 COX19Q49B96 90 aa11.82□□□□□ -0.52
CDH1-213ENST00000612417 C11orf71Q6IPW1 123 aa11.82□□□□□ -0.52
CDH1-213ENST00000612417 THAP8Q8NA92 274 aa11.82□□□□□ -0.52
CDH1-213ENST00000612417 OR2T6Q8NHC8 308 aa11.82□□□□□ -0.52
CDH1-213ENST00000612417 FNDC4Q9H6D8 234 aaPredicted RBP11.82□□□□□ -0.52
CDH1-213ENST00000612417 ZNF430Q9H8G1 570 aaPredicted RBP11.82□□□□□ -0.52
CDH1-213ENST00000612417 CTSZQ9UBR2 303 aa11.82□□□□□ -0.52
CDH1-213ENST00000612417 MYO18BQ8IUG5 2567 aa11.81□□□□□ -0.52
CDH1-213ENST00000612417 A0A1W2PPR1 153 aa11.81□□□□□ -0.52
CDH1-213ENST00000612417 GRIFINA4D1Z8 144 aa11.81□□□□□ -0.52
CDH1-213ENST00000612417 CRISP2P16562 243 aa11.81□□□□□ -0.52
CDH1-213ENST00000612417 LINC00310P59036 64 aa11.81□□□□□ -0.52
CDH1-213ENST00000612417 Q0VG73 95 aa11.81□□□□□ -0.52
CDH1-213ENST00000612417 TMEM155Q4W5P6 130 aa11.81□□□□□ -0.52
CDH1-213ENST00000612417 MRPL52Q86TS9 123 aaKnown RBP11.81□□□□□ -0.52
CDH1-213ENST00000612417 OR8I2Q8N0Y5 310 aa11.81□□□□□ -0.52
CDH1-213ENST00000612417 OR1L4Q8NGR5 311 aa11.81□□□□□ -0.52
CDH1-213ENST00000612417 C22orf15Q8WYQ4 148 aa11.81□□□□□ -0.52
CDH1-213ENST00000612417 MS4A10Q96PG2 267 aa11.81□□□□□ -0.52
CDH1-213ENST00000612417 GSX1Q9H4S2 264 aaPredicted RBP11.81□□□□□ -0.52
CDH1-213ENST00000612417 CDC42EP3Q9UKI2 254 aa11.81□□□□□ -0.52
CDH1-213ENST00000612417 AKAP6Q13023 2319 aa11.81□□□□□ -0.52
CDH1-213ENST00000612417 TCRBV4S1A1TA0A5B7 111 aa11.8□□□□□ -0.52
CDH1-213ENST00000612417 FCN1O00602 326 aa11.8□□□□□ -0.52
CDH1-213ENST00000612417 MC5RP33032 325 aa11.8□□□□□ -0.52
CDH1-213ENST00000612417 IER3P46695 156 aa11.8□□□□□ -0.52
CDH1-213ENST00000612417 UBE2L3P68036 154 aaKnown RBP11.8□□□□□ -0.52
CDH1-213ENST00000612417 DIAPH2-AS1Q14236 149 aa11.8□□□□□ -0.52
CDH1-213ENST00000612417 MORN5Q5VZ52 161 aa11.8□□□□□ -0.52
CDH1-213ENST00000612417 WDR73Q6P4I2 378 aa11.8□□□□□ -0.52
CDH1-213ENST00000612417 CFAP161Q6P656 301 aa11.8□□□□□ -0.52
CDH1-213ENST00000612417 NEU4Q8WWR8 484 aaPredicted RBP11.8□□□□□ -0.52
CDH1-213ENST00000612417 TMEM208Q9BTX3 173 aa11.8□□□□□ -0.52
CDH1-213ENST00000612417 IGKV1D-37A0A075B6S9 117 aa11.8□□□□□ -0.52
CDH1-213ENST00000612417 SNURFLB1AK76 121 aa11.8□□□□□ -0.52
CDH1-213ENST00000612417 TPPP2P59282 170 aa11.8□□□□□ -0.52
CDH1-213ENST00000612417 RANP62826 216 aaKnown RBP11.8□□□□□ -0.52
CDH1-213ENST00000612417 VMA21Q3ZAQ7 101 aa11.8□□□□□ -0.52
CDH1-213ENST00000612417 PVRIGQ6DKI7 326 aa11.8□□□□□ -0.52
CDH1-213ENST00000612417 DTX2Q86UW9 622 aa11.8□□□□□ -0.52
CDH1-213ENST00000612417 OR5AU1Q8NGC0 362 aa11.8□□□□□ -0.52
CDH1-213ENST00000612417 NAGKQ9UJ70 344 aa11.8□□□□□ -0.52
CDH1-213ENST00000612417 SMIM27A0A1W2PRY6 76 aa11.79□□□□□ -0.52
CDH1-213ENST00000612417 A6NNC1 897 aa11.79□□□□□ -0.52
CDH1-213ENST00000612417 COX7A2P2O60397 106 aa11.79□□□□□ -0.52
CDH1-213ENST00000612417 FSTL3O95633 263 aa11.79□□□□□ -0.52
CDH1-213ENST00000612417 LGALS7P47929 136 aa11.79□□□□□ -0.52
CDH1-213ENST00000612417 SSBP2P81877 361 aaPredicted RBP11.79□□□□□ -0.52
CDH1-213ENST00000612417 TMEM95Q3KNT9 176 aa11.79□□□□□ -0.52
CDH1-213ENST00000612417 C10orf55Q5SWW7 151 aa11.79□□□□□ -0.52
CDH1-213ENST00000612417 TIMD4Q96H15 378 aa11.79□□□□□ -0.52
CDH1-213ENST00000612417 RNASE7Q9H1E1 156 aaKnown RBP11.79□□□□□ -0.52
CDH1-213ENST00000612417 MALRD1Q5VYJ5 2156 aa11.79□□□□□ -0.52
CDH1-213ENST00000612417 KIR2DL5BA0A0G2JN68 375 aa11.79□□□□□ -0.52
CDH1-213ENST00000612417 KIR2DL5BA0A0G2JPC4 375 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms