RNA–Protein interactions for RNA: ENST00000609445.5

SGMS1-209, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-209ENST00000609445 OR52E5Q8NH55 327 aa11.67□□□□□ -0.54
SGMS1-209ENST00000609445 TMEM170AQ8WVE7 144 aa11.67□□□□□ -0.54
SGMS1-209ENST00000609445 RPS10-NUDT3A0A1W2PQS6 291 aa11.66□□□□□ -0.54
SGMS1-209ENST00000609445 CEBPZOSA8MTT3 80 aa11.66□□□□□ -0.54
SGMS1-209ENST00000609445 AKAIN1P0CW23 69 aa11.66□□□□□ -0.54
SGMS1-209ENST00000609445 SURF2Q15527 256 aaPredicted RBP11.66□□□□□ -0.54
SGMS1-209ENST00000609445 C2orf83Q53S99 150 aa11.66□□□□□ -0.54
SGMS1-209ENST00000609445 TRPT1Q86TN4 253 aaKnown RBP11.66□□□□□ -0.54
SGMS1-209ENST00000609445 CLVS1Q8IUQ0 354 aaPredicted RBP11.66□□□□□ -0.54
SGMS1-209ENST00000609445 OR51S1Q8NGJ8 323 aa11.66□□□□□ -0.54
SGMS1-209ENST00000609445 DIRAS2Q96HU8 199 aa11.66□□□□□ -0.54
SGMS1-209ENST00000609445 DNAH6Q9C0G6 4158 aa11.66□□□□□ -0.54
SGMS1-209ENST00000609445 VPS13DQ5THJ4 4388 aa11.65□□□□□ -0.54
SGMS1-209ENST00000609445 TRAV30A0A087WSZ9 112 aa11.65□□□□□ -0.54
SGMS1-209ENST00000609445 SCGB2A1O75556 95 aa11.65□□□□□ -0.54
SGMS1-209ENST00000609445 C4BPBP20851 252 aa11.65□□□□□ -0.54
SGMS1-209ENST00000609445 OR10J1P30954 320 aa11.65□□□□□ -0.54
SGMS1-209ENST00000609445 SLC24A4Q8NFF2 622 aa11.65□□□□□ -0.54
SGMS1-209ENST00000609445 OR1S2Q8NGQ3 325 aa11.65□□□□□ -0.54
SGMS1-209ENST00000609445 DCANP1Q8TF63 244 aa11.65□□□□□ -0.54
SGMS1-209ENST00000609445 GRAMD2BQ96HH9 432 aa11.65□□□□□ -0.54
SGMS1-209ENST00000609445 NARS2Q96I59 477 aaKnown RBP11.65□□□□□ -0.54
SGMS1-209ENST00000609445 MFFQ9GZY8 342 aa11.65□□□□□ -0.54
SGMS1-209ENST00000609445 U3KQE9 123 aa11.65□□□□□ -0.54
SGMS1-209ENST00000609445 CTDSPLO15194 276 aa11.64□□□□□ -0.55
SGMS1-209ENST00000609445 IFNA4P05014 189 aa11.64□□□□□ -0.55
SGMS1-209ENST00000609445 NPY1RP25929 384 aa11.64□□□□□ -0.55
SGMS1-209ENST00000609445 Q8NAQ8 132 aa11.64□□□□□ -0.55
SGMS1-209ENST00000609445 DYNC2LI1Q8TCX1 351 aa11.64□□□□□ -0.55
SGMS1-209ENST00000609445 RNASEH2CQ8TDP1 164 aaKnown RBP11.64□□□□□ -0.55
SGMS1-209ENST00000609445 GLMPQ8WWB7 406 aa11.64□□□□□ -0.55
SGMS1-209ENST00000609445 TMEM56-RWDD3S4R434 201 aa11.64□□□□□ -0.55
SGMS1-209ENST00000609445 IGHV4-28A0A0C4DH34 117 aa11.63□□□□□ -0.55
SGMS1-209ENST00000609445 ANKRD20A5PA0PJZ0 165 aa11.63□□□□□ -0.55
SGMS1-209ENST00000609445 HNRNPCP07910 306 aaKnown RBP eCLIP11.63□□□□□ -0.55
SGMS1-209ENST00000609445 RBMY1A1P0DJD3 496 aaKnown RBP11.63□□□□□ -0.55
SGMS1-209ENST00000609445 RBMY1CP0DJD4 496 aa11.63□□□□□ -0.55
SGMS1-209ENST00000609445 SLC25A4P12235 298 aa11.63□□□□□ -0.55
SGMS1-209ENST00000609445 YPEL3P61236 119 aaPredicted RBP11.63□□□□□ -0.55
SGMS1-209ENST00000609445 DHRS2Q13268 280 aa11.63□□□□□ -0.55
SGMS1-209ENST00000609445 RBMY1FQ15415 496 aaKnown RBP11.63□□□□□ -0.55
SGMS1-209ENST00000609445 USF2Q15853 346 aaPredicted RBP11.63□□□□□ -0.55
SGMS1-209ENST00000609445 ACTL10Q5JWF8 245 aa11.63□□□□□ -0.55
SGMS1-209ENST00000609445 LGALS9CQ6DKI2 356 aa11.63□□□□□ -0.55
SGMS1-209ENST00000609445 C16orf54Q6UWD8 224 aa11.63□□□□□ -0.55
SGMS1-209ENST00000609445 Q8WTZ3 238 aa11.63□□□□□ -0.55
SGMS1-209ENST00000609445 NPIPB3Q92617 1050 aa11.63□□□□□ -0.55
SGMS1-209ENST00000609445 ACY3Q96HD9 319 aa11.63□□□□□ -0.55
SGMS1-209ENST00000609445 PRRT1Q99946 306 aa11.63□□□□□ -0.55
SGMS1-209ENST00000609445 IL4P05112 153 aa11.62□□□□□ -0.55
SGMS1-209ENST00000609445 SULT1A3P0DMM9 295 aa11.62□□□□□ -0.55
SGMS1-209ENST00000609445 SULT1A4P0DMN0 295 aa11.62□□□□□ -0.55
SGMS1-209ENST00000609445 PSMG4Q5JS54 123 aa11.62□□□□□ -0.55
SGMS1-209ENST00000609445 CLEC5AQ9NY25 188 aa11.62□□□□□ -0.55
SGMS1-209ENST00000609445 CCDC59Q9P031 241 aaKnown RBP11.62□□□□□ -0.55
SGMS1-209ENST00000609445 GSTZ1O43708 216 aaPredicted RBP11.61□□□□□ -0.55
SGMS1-209ENST00000609445 SPP1P10451 314 aa11.61□□□□□ -0.55
SGMS1-209ENST00000609445 AKR1C4P17516 323 aa11.61□□□□□ -0.55
SGMS1-209ENST00000609445 NMSQ5H8A3 153 aa11.61□□□□□ -0.55
SGMS1-209ENST00000609445 MORN3Q6PF18 240 aaPredicted RBP11.61□□□□□ -0.55
SGMS1-209ENST00000609445 RAB2BQ8WUD1 216 aa11.61□□□□□ -0.55
SGMS1-209ENST00000609445 IL22RA2Q969J5 263 aa11.61□□□□□ -0.55
SGMS1-209ENST00000609445 RAB40CQ96S21 281 aa11.61□□□□□ -0.55
SGMS1-209ENST00000609445 MCUBQ9NWR8 336 aa11.61□□□□□ -0.55
SGMS1-209ENST00000609445 KCNIP3Q9Y2W7 256 aa11.61□□□□□ -0.55
SGMS1-209ENST00000609445 HELTA6NFD8 242 aa11.6□□□□□ -0.55
SGMS1-209ENST00000609445 TOMM40O96008 361 aa11.6□□□□□ -0.55
SGMS1-209ENST00000609445 IFNA10P01566 189 aa11.6□□□□□ -0.55
SGMS1-209ENST00000609445 EIF2B2P49770 351 aaKnown RBP11.6□□□□□ -0.55
SGMS1-209ENST00000609445 SUPT4H1P63272 117 aaKnown RBP11.6□□□□□ -0.55
SGMS1-209ENST00000609445 PRR20EP86478 221 aa11.6□□□□□ -0.55
SGMS1-209ENST00000609445 PRR20CP86479 221 aa11.6□□□□□ -0.55
SGMS1-209ENST00000609445 PRR20DP86480 221 aa11.6□□□□□ -0.55
SGMS1-209ENST00000609445 PRR20BP86481 221 aa11.6□□□□□ -0.55
SGMS1-209ENST00000609445 PRR20AP86496 221 aa11.6□□□□□ -0.55
SGMS1-209ENST00000609445 ETFRF1Q6IPR1 90 aa11.6□□□□□ -0.55
SGMS1-209ENST00000609445 LYZL2Q7Z4W2 148 aa11.6□□□□□ -0.55
SGMS1-209ENST00000609445 C2CD4CQ8TF44 421 aa11.6□□□□□ -0.55
SGMS1-209ENST00000609445 RBKSQ9H477 322 aa11.6□□□□□ -0.55
SGMS1-209ENST00000609445 SCP2D1Q9UJQ7 156 aa11.6□□□□□ -0.55
SGMS1-209ENST00000609445 X6R8D5 127 aa11.6□□□□□ -0.55
SGMS1-209ENST00000609445 ELOA3CA0A087WX78 387 aaPredicted RBP11.59□□□□□ -0.55
SGMS1-209ENST00000609445 ZNF705EA8MWA4 302 aaPredicted RBP11.59□□□□□ -0.55
SGMS1-209ENST00000609445 FAM90A26D6RGX4 464 aa11.59□□□□□ -0.55
SGMS1-209ENST00000609445 RD3LP0DJH9 198 aa11.59□□□□□ -0.55
SGMS1-209ENST00000609445 PSG1P11464 419 aa11.59□□□□□ -0.55
SGMS1-209ENST00000609445 TMBIM6P55061 237 aa11.59□□□□□ -0.55
SGMS1-209ENST00000609445 SMCO1Q147U7 214 aa11.59□□□□□ -0.55
SGMS1-209ENST00000609445 TMEM41BQ5BJD5 291 aa11.59□□□□□ -0.55
SGMS1-209ENST00000609445 CSNK1G2-AS1Q8NCQ2 148 aa11.59□□□□□ -0.55
SGMS1-209ENST00000609445 OR51G1Q8NGK1 321 aa11.59□□□□□ -0.55
SGMS1-209ENST00000609445 DTD1Q8TEA8 209 aa11.59□□□□□ -0.55
SGMS1-209ENST00000609445 RABL2AQ9UBK7 228 aaPredicted RBP11.59□□□□□ -0.55
SGMS1-209ENST00000609445 HSPB7Q9UBY9 170 aa11.59□□□□□ -0.55
SGMS1-209ENST00000609445 RSL24D1Q9UHA3 163 aaKnown RBP11.59□□□□□ -0.55
SGMS1-209ENST00000609445 RABL2BQ9UNT1 228 aa11.59□□□□□ -0.55
SGMS1-209ENST00000609445 A0A0B4J2A0 478 aa11.58□□□□□ -0.56
SGMS1-209ENST00000609445 IGLL5B9A064 214 aa11.58□□□□□ -0.56
SGMS1-209ENST00000609445 BUB3O43684 328 aa11.58□□□□□ -0.56
SGMS1-209ENST00000609445 MIFP14174 115 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms