RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 PRSS54Q6PEW0 395 aa9.69□□□□□ -0.86
POLR2J3-219ENST00000608621 C16orf54Q6UWD8 224 aa9.69□□□□□ -0.86
POLR2J3-219ENST00000608621 FAM219AQ8IW50 185 aa9.69□□□□□ -0.86
POLR2J3-219ENST00000608621 CSNK1G2-AS1Q8NCQ2 148 aa9.69□□□□□ -0.86
POLR2J3-219ENST00000608621 OR52E5Q8NH55 327 aa9.69□□□□□ -0.86
POLR2J3-219ENST00000608621 GLYATL2Q8WU03 294 aa9.69□□□□□ -0.86
POLR2J3-219ENST00000608621 AP3S1Q92572 193 aa9.69□□□□□ -0.86
POLR2J3-219ENST00000608621 RAB40CQ96S21 281 aa9.69□□□□□ -0.86
POLR2J3-219ENST00000608621 RTBDNQ9BSG5 229 aaPredicted RBP9.69□□□□□ -0.86
POLR2J3-219ENST00000608621 TRAV10A0A0B4J240 114 aa9.68□□□□□ -0.86
POLR2J3-219ENST00000608621 HELTA6NFD8 242 aa9.68□□□□□ -0.86
POLR2J3-219ENST00000608621 HNRNPCP07910 306 aaKnown RBP eCLIP9.68□□□□□ -0.86
POLR2J3-219ENST00000608621 IGLC1P0CG04 106 aa9.68□□□□□ -0.86
POLR2J3-219ENST00000608621 EIF2B2P49770 351 aaKnown RBP9.68□□□□□ -0.86
POLR2J3-219ENST00000608621 RND2P52198 227 aa9.68□□□□□ -0.86
POLR2J3-219ENST00000608621 AP2S1P53680 142 aaPredicted RBP9.68□□□□□ -0.86
POLR2J3-219ENST00000608621 DHODHQ02127 395 aa9.68□□□□□ -0.86
POLR2J3-219ENST00000608621 CTF1Q16619 201 aa9.68□□□□□ -0.86
POLR2J3-219ENST00000608621 AARDQ4LEZ3 155 aa9.68□□□□□ -0.86
POLR2J3-219ENST00000608621 C2orf83Q53S99 150 aa9.68□□□□□ -0.86
POLR2J3-219ENST00000608621 Q6ZTC4 211 aa9.68□□□□□ -0.86
POLR2J3-219ENST00000608621 SELENOHQ8IZQ5 122 aaKnown RBP9.68□□□□□ -0.86
POLR2J3-219ENST00000608621 CENPSQ8N2Z9 138 aa9.68□□□□□ -0.86
POLR2J3-219ENST00000608621 OR1S2Q8NGQ3 325 aa9.68□□□□□ -0.86
POLR2J3-219ENST00000608621 LHFPL5Q8TAF8 219 aa9.68□□□□□ -0.86
POLR2J3-219ENST00000608621 C15orf40Q8WUR7 153 aa9.68□□□□□ -0.86
POLR2J3-219ENST00000608621 GPR146Q96CH1 333 aa9.68□□□□□ -0.86
POLR2J3-219ENST00000608621 TBC1D24Q9ULP9 559 aa9.68□□□□□ -0.86
POLR2J3-219ENST00000608621 C14orf166Q9Y224 244 aaKnown RBP9.68□□□□□ -0.86
POLR2J3-219ENST00000608621 CEBPZOSA8MTT3 80 aa9.67□□□□□ -0.86
POLR2J3-219ENST00000608621 SLC25A4P12235 298 aa9.67□□□□□ -0.86
POLR2J3-219ENST00000608621 OR10J1P30954 320 aa9.67□□□□□ -0.86
POLR2J3-219ENST00000608621 YPEL3P61236 119 aaPredicted RBP9.67□□□□□ -0.86
POLR2J3-219ENST00000608621 PSMG4Q5JS54 123 aa9.67□□□□□ -0.86
POLR2J3-219ENST00000608621 FAAP20Q6NZ36 180 aa9.67□□□□□ -0.86
POLR2J3-219ENST00000608621 RNASEH2CQ8TDP1 164 aaKnown RBP9.67□□□□□ -0.86
POLR2J3-219ENST00000608621 GLMPQ8WWB7 406 aa9.67□□□□□ -0.86
POLR2J3-219ENST00000608621 RBPMSQ93062 196 aaKnown RBP9.67□□□□□ -0.86
POLR2J3-219ENST00000608621 MIXL1Q9H2W2 232 aa9.67□□□□□ -0.86
POLR2J3-219ENST00000608621 CACNG5Q9UF02 275 aa9.67□□□□□ -0.86
POLR2J3-219ENST00000608621 IGHV4-4A0A075B6R2 117 aa9.66□□□□□ -0.86
POLR2J3-219ENST00000608621 GABARAPH6UMI1 98 aa9.66□□□□□ -0.86
POLR2J3-219ENST00000608621 GABARAPO95166 117 aa9.66□□□□□ -0.86
POLR2J3-219ENST00000608621 MEF2DQ14814 521 aa9.66□□□□□ -0.86
POLR2J3-219ENST00000608621 USF2Q15853 346 aaPredicted RBP9.66□□□□□ -0.86
POLR2J3-219ENST00000608621 TMEM268Q5VZI3 342 aa9.66□□□□□ -0.86
POLR2J3-219ENST00000608621 TMEM170AQ8WVE7 144 aa9.66□□□□□ -0.86
POLR2J3-219ENST00000608621 NPIPB3Q92617 1050 aa9.66□□□□□ -0.86
POLR2J3-219ENST00000608621 NAA60Q9H7X0 242 aa9.66□□□□□ -0.86
POLR2J3-219ENST00000608621 GPR132Q9UNW8 380 aa9.66□□□□□ -0.86
POLR2J3-219ENST00000608621 DNAH6Q9C0G6 4158 aa9.66□□□□□ -0.86
POLR2J3-219ENST00000608621 HERC2O95714 4834 aa9.65□□□□□ -0.86
POLR2J3-219ENST00000608621 DISC1C4P0D8 188 aa9.65□□□□□ -0.86
POLR2J3-219ENST00000608621 FAM90A26D6RGX4 464 aa9.65□□□□□ -0.86
POLR2J3-219ENST00000608621 CTDSP2O14595 271 aa9.65□□□□□ -0.86
POLR2J3-219ENST00000608621 NXPH3O95157 252 aa9.65□□□□□ -0.86
POLR2J3-219ENST00000608621 IL4P05112 153 aa9.65□□□□□ -0.86
POLR2J3-219ENST00000608621 SSBP1Q04837 148 aaKnown RBP9.65□□□□□ -0.86
POLR2J3-219ENST00000608621 GPR107Q5VW38 600 aa9.65□□□□□ -0.86
POLR2J3-219ENST00000608621 ETFRF1Q6IPR1 90 aa9.65□□□□□ -0.86
POLR2J3-219ENST00000608621 ZNF767PQ75MW2 155 aa9.65□□□□□ -0.86
POLR2J3-219ENST00000608621 SLC24A4Q8NFF2 622 aa9.65□□□□□ -0.86
POLR2J3-219ENST00000608621 CELA1Q9UNI1 258 aa9.65□□□□□ -0.86
POLR2J3-219ENST00000608621 CRYM-AS1A6NIL9 109 aa9.64□□□□□ -0.87
POLR2J3-219ENST00000608621 RGS5O15539 181 aa9.64□□□□□ -0.87
POLR2J3-219ENST00000608621 BUB3O43684 328 aa9.64□□□□□ -0.87
POLR2J3-219ENST00000608621 TOMM40O96008 361 aa9.64□□□□□ -0.87
POLR2J3-219ENST00000608621 RD3LP0DJH9 198 aa9.64□□□□□ -0.87
POLR2J3-219ENST00000608621 NUTF2P61970 127 aaKnown RBP9.64□□□□□ -0.87
POLR2J3-219ENST00000608621 SNRPD3P62318 126 aaKnown RBP9.64□□□□□ -0.87
POLR2J3-219ENST00000608621 SURF2Q15527 256 aaPredicted RBP9.64□□□□□ -0.87
POLR2J3-219ENST00000608621 C12orf74Q32Q52 190 aa9.64□□□□□ -0.87
POLR2J3-219ENST00000608621 ACY3Q96HD9 319 aa9.64□□□□□ -0.87
POLR2J3-219ENST00000608621 RNF126Q9BV68 326 aa9.64□□□□□ -0.87
POLR2J3-219ENST00000608621 C1QTNF4Q9BXJ3 329 aa9.64□□□□□ -0.87
POLR2J3-219ENST00000608621 NRN1Q9NPD7 142 aa9.64□□□□□ -0.87
POLR2J3-219ENST00000608621 XCL2Q9UBD3 114 aa9.64□□□□□ -0.87
POLR2J3-219ENST00000608621 TMEM56-RWDD3S4R434 201 aa9.64□□□□□ -0.87
POLR2J3-219ENST00000608621 DEFB131BA0A096LNP1 70 aa9.63□□□□□ -0.87
POLR2J3-219ENST00000608621 H3BMM0 161 aa9.63□□□□□ -0.87
POLR2J3-219ENST00000608621 AKAIN1P0CW23 69 aa9.63□□□□□ -0.87
POLR2J3-219ENST00000608621 PSG1P11464 419 aa9.63□□□□□ -0.87
POLR2J3-219ENST00000608621 NPY1RP25929 384 aa9.63□□□□□ -0.87
POLR2J3-219ENST00000608621 MRPS10P82664 201 aaKnown RBP9.63□□□□□ -0.87
POLR2J3-219ENST00000608621 SIGLEC15Q6ZMC9 328 aa9.63□□□□□ -0.87
POLR2J3-219ENST00000608621 NOXA1Q86UR1 476 aa9.63□□□□□ -0.87
POLR2J3-219ENST00000608621 OR51G1Q8NGK1 321 aa9.63□□□□□ -0.87
POLR2J3-219ENST00000608621 OR4C16Q8NGL9 310 aa9.63□□□□□ -0.87
POLR2J3-219ENST00000608621 SEPSECSQ9HD40 501 aaKnown RBP9.63□□□□□ -0.87
POLR2J3-219ENST00000608621 KCNIP3Q9Y2W7 256 aa9.63□□□□□ -0.87
POLR2J3-219ENST00000608621 HECTD4Q9Y4D8 3996 aa9.62□□□□□ -0.87
POLR2J3-219ENST00000608621 GSTZ1O43708 216 aaPredicted RBP9.62□□□□□ -0.87
POLR2J3-219ENST00000608621 IFNA10P01566 189 aa9.62□□□□□ -0.87
POLR2J3-219ENST00000608621 SMIM18P0DKX4 95 aa9.62□□□□□ -0.87
POLR2J3-219ENST00000608621 SULT1A3P0DMM9 295 aa9.62□□□□□ -0.87
POLR2J3-219ENST00000608621 SULT1A4P0DMN0 295 aa9.62□□□□□ -0.87
POLR2J3-219ENST00000608621 NMSQ5H8A3 153 aa9.62□□□□□ -0.87
POLR2J3-219ENST00000608621 SMIM4Q8WVI0 70 aa9.62□□□□□ -0.87
POLR2J3-219ENST00000608621 SCRT1Q9BWW7 348 aa9.62□□□□□ -0.87
POLR2J3-219ENST00000608621 PRR13Q9NZ81 148 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms