RNA–Protein interactions for RNA: ENST00000607814.5

CTSA-218, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-218ENST00000607814 BTCP35070 178 aa10.12□□□□□ -0.79
CTSA-218ENST00000607814 ZNF124Q15973 351 aa10.12□□□□□ -0.79
CTSA-218ENST00000607814 C2orf83Q53S99 150 aa10.12□□□□□ -0.79
CTSA-218ENST00000607814 WFDC3Q8IUB2 231 aa10.12□□□□□ -0.79
CTSA-218ENST00000607814 OR4X1Q8NH49 305 aa10.12□□□□□ -0.79
CTSA-218ENST00000607814 DTD1Q8TEA8 209 aa10.12□□□□□ -0.79
CTSA-218ENST00000607814 ST8SIA2Q92186 375 aa10.12□□□□□ -0.79
CTSA-218ENST00000607814 OR10C1Q96KK4 312 aa10.12□□□□□ -0.79
CTSA-218ENST00000607814 MAGT1Q9H0U3 335 aa10.12□□□□□ -0.79
CTSA-218ENST00000607814 ZFAND3Q9H8U3 227 aa10.12□□□□□ -0.79
CTSA-218ENST00000607814 KIAA1109Q2LD37 5005 aa10.11□□□□□ -0.79
CTSA-218ENST00000607814 NUPR2A6NF83 97 aa10.11□□□□□ -0.79
CTSA-218ENST00000607814 CORTO00230 105 aa10.11□□□□□ -0.79
CTSA-218ENST00000607814 TSPAN4O14817 238 aa10.11□□□□□ -0.79
CTSA-218ENST00000607814 ADAP1O75689 374 aa10.11□□□□□ -0.79
CTSA-218ENST00000607814 IGKV1-17P01599 117 aa10.11□□□□□ -0.79
CTSA-218ENST00000607814 ANXA7P20073 488 aaKnown RBP10.11□□□□□ -0.79
CTSA-218ENST00000607814 NPY1RP25929 384 aa10.11□□□□□ -0.79
CTSA-218ENST00000607814 RND2P52198 227 aa10.11□□□□□ -0.79
CTSA-218ENST00000607814 RBMS2Q15434 407 aaKnown RBP10.11□□□□□ -0.79
CTSA-218ENST00000607814 PRSS54Q6PEW0 395 aa10.11□□□□□ -0.79
CTSA-218ENST00000607814 ZNF600Q6ZNG1 722 aa10.11□□□□□ -0.79
CTSA-218ENST00000607814 NPIPB3Q92617 1050 aa10.11□□□□□ -0.79
CTSA-218ENST00000607814 ACY3Q96HD9 319 aa10.11□□□□□ -0.79
CTSA-218ENST00000607814 HSPB7Q9UBY9 170 aa10.11□□□□□ -0.79
CTSA-218ENST00000607814 PAIP2BQ9ULR5 123 aaKnown RBP10.11□□□□□ -0.79
CTSA-218ENST00000607814 TRAV25A0A0B4J276 109 aa10.1□□□□□ -0.79
CTSA-218ENST00000607814 MPTX1A8MV57 137 aa10.1□□□□□ -0.79
CTSA-218ENST00000607814 PLA2G10O15496 165 aa10.1□□□□□ -0.79
CTSA-218ENST00000607814 DFFBO76075 338 aa10.1□□□□□ -0.79
CTSA-218ENST00000607814 NDUFB6O95139 128 aa10.1□□□□□ -0.79
CTSA-218ENST00000607814 UBE2MP61081 183 aaKnown RBP10.1□□□□□ -0.79
CTSA-218ENST00000607814 SRPXP78539 464 aa10.1□□□□□ -0.79
CTSA-218ENST00000607814 ODF3L2Q3SX64 289 aa10.1□□□□□ -0.79
CTSA-218ENST00000607814 LAMTOR1Q6IAA8 161 aa10.1□□□□□ -0.79
CTSA-218ENST00000607814 APRG1Q8IVJ8 170 aa10.1□□□□□ -0.79
CTSA-218ENST00000607814 C9orf170A2RU37 121 aa10.09□□□□□ -0.79
CTSA-218ENST00000607814 PITX3O75364 302 aa10.09□□□□□ -0.79
CTSA-218ENST00000607814 IFNA4P05014 189 aa10.09□□□□□ -0.79
CTSA-218ENST00000607814 RPL11P62913 178 aaKnown RBP10.09□□□□□ -0.79
CTSA-218ENST00000607814 GGNBP1Q5YKI7 109 aa10.09□□□□□ -0.79
CTSA-218ENST00000607814 TCF24Q7RTU0 167 aa10.09□□□□□ -0.79
CTSA-218ENST00000607814 LRTM2Q8N967 370 aa10.09□□□□□ -0.79
CTSA-218ENST00000607814 S100ZQ8WXG8 99 aa10.09□□□□□ -0.79
CTSA-218ENST00000607814 SPAG8Q99932 426 aaPredicted RBP10.09□□□□□ -0.79
CTSA-218ENST00000607814 RPS10-NUDT3A0A1W2PQS6 291 aa10.08□□□□□ -0.8
CTSA-218ENST00000607814 NAP1L6A6NFF2 107 aa10.08□□□□□ -0.8
CTSA-218ENST00000607814 OR4E1P0C645 316 aa10.08□□□□□ -0.8
CTSA-218ENST00000607814 IGLC1P0CG04 106 aa10.08□□□□□ -0.8
CTSA-218ENST00000607814 RPL35AP18077 110 aaKnown RBP10.08□□□□□ -0.8
CTSA-218ENST00000607814 OR10J1P30954 320 aa10.08□□□□□ -0.8
CTSA-218ENST00000607814 FAM90A2PQ658T7 463 aa10.08□□□□□ -0.8
CTSA-218ENST00000607814 GSG1LQ6UXU4 331 aa10.08□□□□□ -0.8
CTSA-218ENST00000607814 RNASEH2CQ8TDP1 164 aaKnown RBP10.08□□□□□ -0.8
CTSA-218ENST00000607814 DEDD2Q8WXF8 326 aa10.08□□□□□ -0.8
CTSA-218ENST00000607814 U3KQ87 197 aa10.08□□□□□ -0.8
CTSA-218ENST00000607814 CXorf65A6NEN9 183 aa10.07□□□□□ -0.8
CTSA-218ENST00000607814 CENPXA8MT69 81 aa10.07□□□□□ -0.8
CTSA-218ENST00000607814 WRBO00258 174 aa10.07□□□□□ -0.8
CTSA-218ENST00000607814 NPPCP23582 126 aa10.07□□□□□ -0.8
CTSA-218ENST00000607814 DHRS2Q13268 280 aa10.07□□□□□ -0.8
CTSA-218ENST00000607814 C4orf46Q504U0 113 aa10.07□□□□□ -0.8
CTSA-218ENST00000607814 FAM24BQ8N5W8 94 aa10.07□□□□□ -0.8
CTSA-218ENST00000607814 GINS3Q9BRX5 216 aa10.07□□□□□ -0.8
CTSA-218ENST00000607814 TRAV6A0A075B6T7 132 aa10.06□□□□□ -0.8
CTSA-218ENST00000607814 LOC102724200A0A096LPH7 203 aaPredicted RBP10.06□□□□□ -0.8
CTSA-218ENST00000607814 DUXBA0A1W2PPF3 345 aa10.06□□□□□ -0.8
CTSA-218ENST00000607814 OR4C46A6NHA9 309 aa10.06□□□□□ -0.8
CTSA-218ENST00000607814 H3BP45 60 aa10.06□□□□□ -0.8
CTSA-218ENST00000607814 SLC25A4P12235 298 aa10.06□□□□□ -0.8
CTSA-218ENST00000607814 Q8WTZ3 238 aa10.06□□□□□ -0.8
CTSA-218ENST00000607814 GATAD1Q8WUU5 269 aa10.06□□□□□ -0.8
CTSA-218ENST00000607814 GGTLC1Q9BX51 225 aa10.06□□□□□ -0.8
CTSA-218ENST00000607814 MS4A6AQ9H2W1 248 aa10.06□□□□□ -0.8
CTSA-218ENST00000607814 VSIRQ9H7M9 311 aa10.06□□□□□ -0.8
CTSA-218ENST00000607814 TMED3Q9Y3Q3 217 aa10.06□□□□□ -0.8
CTSA-218ENST00000607814 TRAV30A0A087WSZ9 112 aa10.05□□□□□ -0.8
CTSA-218ENST00000607814 LYRM1O43325 122 aa10.05□□□□□ -0.8
CTSA-218ENST00000607814 IL4P05112 153 aa10.05□□□□□ -0.8
CTSA-218ENST00000607814 POLR2GP62487 172 aaKnown RBP eCLIP10.05□□□□□ -0.8
CTSA-218ENST00000607814 ZNF90Q03938 601 aa10.05□□□□□ -0.8
CTSA-218ENST00000607814 GAMTQ14353 236 aa10.05□□□□□ -0.8
CTSA-218ENST00000607814 USF2Q15853 346 aaPredicted RBP10.05□□□□□ -0.8
CTSA-218ENST00000607814 LEMD1Q68G75 181 aa10.05□□□□□ -0.8
CTSA-218ENST00000607814 ETFRF1Q6IPR1 90 aa10.05□□□□□ -0.8
CTSA-218ENST00000607814 CEMP1Q6PRD7 247 aaPredicted RBP10.05□□□□□ -0.8
CTSA-218ENST00000607814 LYG2Q86SG7 212 aa10.05□□□□□ -0.8
CTSA-218ENST00000607814 RPP25LQ8N5L8 163 aaKnown RBP10.05□□□□□ -0.8
CTSA-218ENST00000607814 OR1S2Q8NGQ3 325 aa10.05□□□□□ -0.8
CTSA-218ENST00000607814 METTL26Q96S19 204 aa10.05□□□□□ -0.8
CTSA-218ENST00000607814 WDR12Q9GZL7 423 aaKnown RBP10.05□□□□□ -0.8
CTSA-218ENST00000607814 RABAC1Q9UI14 185 aa10.05□□□□□ -0.8
CTSA-218ENST00000607814 KLK5Q9Y337 293 aaPredicted RBP10.05□□□□□ -0.8
CTSA-218ENST00000607814 IGKV1D-37A0A075B6S9 117 aa10.04□□□□□ -0.8
CTSA-218ENST00000607814 DNASE2O00115 360 aaPredicted RBP10.04□□□□□ -0.8
CTSA-218ENST00000607814 SYNGR2O43760 224 aa10.04□□□□□ -0.8
CTSA-218ENST00000607814 RD3LP0DJH9 198 aa10.04□□□□□ -0.8
CTSA-218ENST00000607814 PSG1P11464 419 aa10.04□□□□□ -0.8
CTSA-218ENST00000607814 ATF4P18848 351 aaPredicted RBP10.04□□□□□ -0.8
CTSA-218ENST00000607814 CRYBB3P26998 211 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms