RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 STAG3L3P0CL85 134 aa16.94■□□□□ 0.3
USP6NL-204ENST00000606752 CRIP2P52943 208 aaPredicted RBP16.94■□□□□ 0.3
USP6NL-204ENST00000606752 KHDC3LQ587J8 217 aa16.94■□□□□ 0.3
USP6NL-204ENST00000606752 RBMS3Q6XE24 437 aaKnown RBP16.94■□□□□ 0.3
USP6NL-204ENST00000606752 SLC35E3Q7Z769 313 aa16.94■□□□□ 0.3
USP6NL-204ENST00000606752 TEX29Q8N6K0 151 aa16.94■□□□□ 0.3
USP6NL-204ENST00000606752 GATAD1Q8WUU5 269 aa16.94■□□□□ 0.3
USP6NL-204ENST00000606752 F8W036 122 aa16.93■□□□□ 0.3
USP6NL-204ENST00000606752 G3V318 75 aa16.93■□□□□ 0.3
USP6NL-204ENST00000606752 IFNA1P01562 189 aa16.93■□□□□ 0.3
USP6NL-204ENST00000606752 ICAM4Q14773 271 aa16.93■□□□□ 0.3
USP6NL-204ENST00000606752 C9orf152Q5JTZ5 239 aa16.93■□□□□ 0.3
USP6NL-204ENST00000606752 FAM78BQ5VT40 261 aa16.93■□□□□ 0.3
USP6NL-204ENST00000606752 OR5R1Q8NH85 324 aa16.93■□□□□ 0.3
USP6NL-204ENST00000606752 SEC11CQ9BY50 192 aa16.93■□□□□ 0.3
USP6NL-204ENST00000606752 TMPRSS5Q9H3S3 457 aa16.93■□□□□ 0.3
USP6NL-204ENST00000606752 DNAJC4Q9NNZ3 241 aa16.93■□□□□ 0.3
USP6NL-204ENST00000606752 LOC102723971A0A1B0GUV8 181 aa16.93■□□□□ 0.3
USP6NL-204ENST00000606752 PSMB11A5LHX3 300 aa16.93■□□□□ 0.3
USP6NL-204ENST00000606752 IGHG2P01859 326 aa16.93■□□□□ 0.3
USP6NL-204ENST00000606752 BCL2P10415 239 aa16.93■□□□□ 0.3
USP6NL-204ENST00000606752 ADCYAP1P18509 176 aa16.93■□□□□ 0.3
USP6NL-204ENST00000606752 PPT1P50897 306 aa16.93■□□□□ 0.3
USP6NL-204ENST00000606752 C10orf91Q5T1B1 145 aa16.93■□□□□ 0.3
USP6NL-204ENST00000606752 Q6YL49 198 aa16.93■□□□□ 0.3
USP6NL-204ENST00000606752 TMEM37Q8WXS4 190 aa16.93■□□□□ 0.3
USP6NL-204ENST00000606752 SLC35B3Q9H1N7 401 aa16.93■□□□□ 0.3
USP6NL-204ENST00000606752 GSX1Q9H4S2 264 aaPredicted RBP16.93■□□□□ 0.3
USP6NL-204ENST00000606752 FUT9Q9Y231 359 aa16.93■□□□□ 0.3
USP6NL-204ENST00000606752 OR2J3O76001 311 aa16.92■□□□□ 0.3
USP6NL-204ENST00000606752 NDUFB8O95169 186 aa16.92■□□□□ 0.3
USP6NL-204ENST00000606752 CXorf1O96002 111 aa16.92■□□□□ 0.3
USP6NL-204ENST00000606752 APOC3P02656 99 aa16.92■□□□□ 0.3
USP6NL-204ENST00000606752 IGF1P05019 195 aa16.92■□□□□ 0.3
USP6NL-204ENST00000606752 OR5G3P0C626 314 aa16.92■□□□□ 0.3
USP6NL-204ENST00000606752 NPBWR1P48145 328 aa16.92■□□□□ 0.3
USP6NL-204ENST00000606752 PSMB3P49720 205 aa16.92■□□□□ 0.3
USP6NL-204ENST00000606752 MFAP4P55083 255 aa16.92■□□□□ 0.3
USP6NL-204ENST00000606752 SPATA31B1PQ5VZV4 182 aa16.92■□□□□ 0.3
USP6NL-204ENST00000606752 OR1L4Q8NGR5 311 aa16.92■□□□□ 0.3
USP6NL-204ENST00000606752 RXFP4Q8TDU9 374 aa16.92■□□□□ 0.3
USP6NL-204ENST00000606752 PFDN5Q99471 154 aa16.92■□□□□ 0.3
USP6NL-204ENST00000606752 HECTD1Q9ULT8 2610 aa16.92■□□□□ 0.3
USP6NL-204ENST00000606752 TRAV41A0A0B4J266 112 aa16.91■□□□□ 0.3
USP6NL-204ENST00000606752 HSPB1P04792 205 aaKnown RBP16.91■□□□□ 0.3
USP6NL-204ENST00000606752 BLCAPP62952 87 aa16.91■□□□□ 0.3
USP6NL-204ENST00000606752 IQCF2Q8IXL9 164 aa16.91■□□□□ 0.3
USP6NL-204ENST00000606752 ZNF48Q96MX3 618 aaPredicted RBP16.91■□□□□ 0.3
USP6NL-204ENST00000606752 RNF2Q99496 336 aa16.91■□□□□ 0.3
USP6NL-204ENST00000606752 PRDM13Q9H4Q3 707 aa16.91■□□□□ 0.3
USP6NL-204ENST00000606752 FBXL7Q9UJT9 491 aa16.91■□□□□ 0.3
USP6NL-204ENST00000606752 TEX15Q9BXT5 2789 aa16.91■□□□□ 0.3
USP6NL-204ENST00000606752 C19orf54Q5BKX5 351 aa16.91■□□□□ 0.3
USP6NL-204ENST00000606752 MIR17HGQ75NE6 70 aa16.91■□□□□ 0.3
USP6NL-204ENST00000606752 ZNF355PQ9NSJ1 428 aa16.91■□□□□ 0.3
USP6NL-204ENST00000606752 C21orf62Q9NYP8 219 aa16.91■□□□□ 0.3
USP6NL-204ENST00000606752 VAX2Q9UIW0 290 aa16.91■□□□□ 0.3
USP6NL-204ENST00000606752 CARHSP1Q9Y2V2 147 aaKnown RBP16.91■□□□□ 0.3
USP6NL-204ENST00000606752 TRAV30A0A087WSZ9 112 aa16.9■□□□□ 0.3
USP6NL-204ENST00000606752 TRBV9A0A0B4J1U6 114 aa16.9■□□□□ 0.3
USP6NL-204ENST00000606752 COX7A2P2O60397 106 aa16.9■□□□□ 0.3
USP6NL-204ENST00000606752 IGKV1-17P01599 117 aa16.9■□□□□ 0.3
USP6NL-204ENST00000606752 ARL14EPLP0DKL9 152 aa16.9■□□□□ 0.3
USP6NL-204ENST00000606752 TAGLN2P37802 199 aaKnown RBP16.9■□□□□ 0.3
USP6NL-204ENST00000606752 SPNS3Q6ZMD2 512 aa16.9■□□□□ 0.3
USP6NL-204ENST00000606752 CCDC28AQ8IWP9 274 aa16.9■□□□□ 0.3
USP6NL-204ENST00000606752 VN1R17PQ8TDU5 208 aa16.9■□□□□ 0.3
USP6NL-204ENST00000606752 MRPL32Q9BYC8 188 aaKnown RBP16.9■□□□□ 0.3
USP6NL-204ENST00000606752 MANBALQ9NQG1 85 aa16.9■□□□□ 0.3
USP6NL-204ENST00000606752 ELOA3CA0A087WX78 387 aaPredicted RBP16.89■□□□□ 0.29
USP6NL-204ENST00000606752 FABP1P07148 127 aa16.89■□□□□ 0.29
USP6NL-204ENST00000606752 TIGITQ495A1 244 aa16.89■□□□□ 0.29
USP6NL-204ENST00000606752 C10orf113Q5VZT2 155 aa16.89■□□□□ 0.29
USP6NL-204ENST00000606752 PATE2Q6UY27 113 aa16.89■□□□□ 0.29
USP6NL-204ENST00000606752 TECRQ9NZ01 308 aaKnown RBP16.89■□□□□ 0.29
USP6NL-204ENST00000606752 DOK5Q9P104 306 aa16.89■□□□□ 0.29
USP6NL-204ENST00000606752 S4R3C0 116 aa16.89■□□□□ 0.29
USP6NL-204ENST00000606752 GNG7O60262 68 aa16.89■□□□□ 0.29
USP6NL-204ENST00000606752 SRP19P09132 144 aaKnown RBP16.89■□□□□ 0.29
USP6NL-204ENST00000606752 PLP1P60201 277 aa16.89■□□□□ 0.29
USP6NL-204ENST00000606752 RD3LP0DJH9 198 aa16.88■□□□□ 0.29
USP6NL-204ENST00000606752 PSG1P11464 419 aa16.88■□□□□ 0.29
USP6NL-204ENST00000606752 TAS2R45P59539 299 aa16.88■□□□□ 0.29
USP6NL-204ENST00000606752 RHOGP84095 191 aa16.88■□□□□ 0.29
USP6NL-204ENST00000606752 DEFA5Q01523 94 aa16.88■□□□□ 0.29
USP6NL-204ENST00000606752 NECAP1Q8NC96 275 aa16.88■□□□□ 0.29
USP6NL-204ENST00000606752 TXN2Q99757 166 aa16.88■□□□□ 0.29
USP6NL-204ENST00000606752 VPREB3Q9UKI3 123 aa16.88■□□□□ 0.29
USP6NL-204ENST00000606752 F8W735 103 aaPredicted RBP16.87■□□□□ 0.29
USP6NL-204ENST00000606752 CD5LO43866 347 aa16.87■□□□□ 0.29
USP6NL-204ENST00000606752 C8orf88P0DMB2 117 aa16.87■□□□□ 0.29
USP6NL-204ENST00000606752 ORM2P19652 201 aa16.87■□□□□ 0.29
USP6NL-204ENST00000606752 FCGR2BP31994 310 aaPredicted RBP16.87■□□□□ 0.29
USP6NL-204ENST00000606752 LINC00527Q9UJ94 153 aa16.87■□□□□ 0.29
USP6NL-204ENST00000606752 GCHFRP30047 84 aa16.86■□□□□ 0.29
USP6NL-204ENST00000606752 KRTAP1-1Q07627 177 aa16.86■□□□□ 0.29
USP6NL-204ENST00000606752 C15orf32Q32M92 178 aa16.86■□□□□ 0.29
USP6NL-204ENST00000606752 Q56UQ5 140 aa16.86■□□□□ 0.29
USP6NL-204ENST00000606752 Q6ZS46 218 aa16.86■□□□□ 0.29
USP6NL-204ENST00000606752 OR1B1Q8NGR6 318 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms