RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 ACTR3CQ9C0K3 210 aaPredicted RBP13.78□□□□□ -0.2
PPFIA3-207ENST00000602716 MEGF9Q9H1U4 602 aa13.78□□□□□ -0.2
PPFIA3-207ENST00000602716 MANBALQ9NQG1 85 aa13.78□□□□□ -0.2
PPFIA3-207ENST00000602716 SH2D7A6NKC9 451 aaPredicted RBP13.77□□□□□ -0.21
PPFIA3-207ENST00000602716 CA2P00918 260 aa13.77□□□□□ -0.21
PPFIA3-207ENST00000602716 APELAP0DMC3 54 aa13.77□□□□□ -0.21
PPFIA3-207ENST00000602716 PLGLAQ15195 96 aa13.77□□□□□ -0.21
PPFIA3-207ENST00000602716 ADIRFQ15847 76 aa13.77□□□□□ -0.21
PPFIA3-207ENST00000602716 C19orf35Q6ZS72 473 aa13.77□□□□□ -0.21
PPFIA3-207ENST00000602716 HIST3H2BBQ8N257 126 aa13.77□□□□□ -0.21
PPFIA3-207ENST00000602716 SMR3AQ99954 134 aa13.77□□□□□ -0.21
PPFIA3-207ENST00000602716 NDUFA4L2Q9NRX3 87 aa13.77□□□□□ -0.21
PPFIA3-207ENST00000602716 ZNF257Q9Y2Q1 563 aa13.77□□□□□ -0.21
PPFIA3-207ENST00000602716 ACANP16112 2415 aa13.77□□□□□ -0.21
PPFIA3-207ENST00000602716 TLN2Q9Y4G6 2542 aa13.77□□□□□ -0.21
PPFIA3-207ENST00000602716 ANK3Q12955 4377 aaKnown RBP13.76□□□□□ -0.21
PPFIA3-207ENST00000602716 NCBP2LA6PVI3 153 aaKnown RBP13.76□□□□□ -0.21
PPFIA3-207ENST00000602716 C15orf62A8K5M9 175 aa13.76□□□□□ -0.21
PPFIA3-207ENST00000602716 PPP1R2P9O14990 202 aa13.76□□□□□ -0.21
PPFIA3-207ENST00000602716 BRS3P32247 399 aa13.76□□□□□ -0.21
PPFIA3-207ENST00000602716 NDPQ00604 133 aa13.76□□□□□ -0.21
PPFIA3-207ENST00000602716 C5orf64Q2M2E5 130 aa13.76□□□□□ -0.21
PPFIA3-207ENST00000602716 GFI1BQ5VTD9 330 aa13.76□□□□□ -0.21
PPFIA3-207ENST00000602716 COMMD5Q9GZQ3 224 aa13.76□□□□□ -0.21
PPFIA3-207ENST00000602716 FAM106CPP0CH98 169 aa13.76□□□□□ -0.21
PPFIA3-207ENST00000602716 LY6EQ16553 131 aa13.76□□□□□ -0.21
PPFIA3-207ENST00000602716 C16orf82Q7Z2V1 217 aa13.76□□□□□ -0.21
PPFIA3-207ENST00000602716 MMD2Q8IY49 270 aa13.76□□□□□ -0.21
PPFIA3-207ENST00000602716 ZNF709Q8N972 641 aa13.76□□□□□ -0.21
PPFIA3-207ENST00000602716 Q8N9W7 124 aa13.76□□□□□ -0.21
PPFIA3-207ENST00000602716 OR5B3Q8NH48 314 aa13.76□□□□□ -0.21
PPFIA3-207ENST00000602716 GATAD1Q8WUU5 269 aa13.76□□□□□ -0.21
PPFIA3-207ENST00000602716 RAB24Q969Q5 203 aa13.76□□□□□ -0.21
PPFIA3-207ENST00000602716 RPUSD4Q96CM3 377 aaKnown RBP13.76□□□□□ -0.21
PPFIA3-207ENST00000602716 PLXNB1O43157 2135 aa13.75□□□□□ -0.21
PPFIA3-207ENST00000602716 H3BUX3 64 aa13.75□□□□□ -0.21
PPFIA3-207ENST00000602716 COMPP49747 757 aaPredicted RBP13.75□□□□□ -0.21
PPFIA3-207ENST00000602716 RPL23P62829 140 aaKnown RBP13.75□□□□□ -0.21
PPFIA3-207ENST00000602716 WT1-ASQ06250 92 aa13.75□□□□□ -0.21
PPFIA3-207ENST00000602716 BSXQ3C1V8 233 aa13.75□□□□□ -0.21
PPFIA3-207ENST00000602716 OR1L8Q8NGR8 309 aa13.75□□□□□ -0.21
PPFIA3-207ENST00000602716 ZNF48Q96MX3 618 aaPredicted RBP13.75□□□□□ -0.21
PPFIA3-207ENST00000602716 PLEKHA3Q9HB20 300 aa13.75□□□□□ -0.21
PPFIA3-207ENST00000602716 HEYLQ9NQ87 328 aaPredicted RBP13.75□□□□□ -0.21
PPFIA3-207ENST00000602716 DMRT1Q9Y5R6 373 aa13.75□□□□□ -0.21
PPFIA3-207ENST00000602716 PFN1P07737 140 aaKnown RBP13.74□□□□□ -0.21
PPFIA3-207ENST00000602716 PYGO2Q9BRQ0 406 aa13.74□□□□□ -0.21
PPFIA3-207ENST00000602716 FAM103A1Q9BTL3 118 aaKnown RBP13.74□□□□□ -0.21
PPFIA3-207ENST00000602716 GPR61Q9BZJ8 451 aa13.74□□□□□ -0.21
PPFIA3-207ENST00000602716 PARLQ9H300 379 aa13.74□□□□□ -0.21
PPFIA3-207ENST00000602716 FLNBO75369 2602 aaKnown RBP13.74□□□□□ -0.21
PPFIA3-207ENST00000602716 C17orf112F2Z3M2 114 aa13.74□□□□□ -0.21
PPFIA3-207ENST00000602716 CD5LO43866 347 aa13.74□□□□□ -0.21
PPFIA3-207ENST00000602716 REG1AP05451 166 aa13.74□□□□□ -0.21
PPFIA3-207ENST00000602716 AREGP15514 252 aa13.74□□□□□ -0.21
PPFIA3-207ENST00000602716 OR10D4PQ8NGN7 298 aa13.74□□□□□ -0.21
PPFIA3-207ENST00000602716 OR4F5Q8NH21 305 aa13.74□□□□□ -0.21
PPFIA3-207ENST00000602716 OR4F4Q96R69 305 aa13.74□□□□□ -0.21
PPFIA3-207ENST00000602716 IGLC7A0M8Q6 106 aa13.73□□□□□ -0.21
PPFIA3-207ENST00000602716 TEX22C9J3V5 150 aa13.73□□□□□ -0.21
PPFIA3-207ENST00000602716 RPL27AP46776 148 aaKnown RBP13.73□□□□□ -0.21
PPFIA3-207ENST00000602716 ZNF600Q6ZNG1 722 aa13.73□□□□□ -0.21
PPFIA3-207ENST00000602716 SRSF12Q8WXF0 261 aaKnown RBP13.73□□□□□ -0.21
PPFIA3-207ENST00000602716 HSPB9Q9BQS6 159 aa13.73□□□□□ -0.21
PPFIA3-207ENST00000602716 FKBP11Q9NYL4 201 aa13.73□□□□□ -0.21
PPFIA3-207ENST00000602716 IGHV4-59P01825 116 aa13.73□□□□□ -0.21
PPFIA3-207ENST00000602716 SLC25A33Q9BSK2 321 aa13.73□□□□□ -0.21
PPFIA3-207ENST00000602716 SRD5A3Q9H8P0 318 aa13.73□□□□□ -0.21
PPFIA3-207ENST00000602716 WDR83OSQ9Y284 106 aa13.73□□□□□ -0.21
PPFIA3-207ENST00000602716 PAGE4O60829 102 aa13.72□□□□□ -0.21
PPFIA3-207ENST00000602716 LY86O95711 162 aa13.72□□□□□ -0.21
PPFIA3-207ENST00000602716 IFNA10P01566 189 aa13.72□□□□□ -0.21
PPFIA3-207ENST00000602716 ACOT6Q3I5F7 207 aaPredicted RBP13.72□□□□□ -0.21
PPFIA3-207ENST00000602716 PDZD11Q5EBL8 140 aa13.72□□□□□ -0.21
PPFIA3-207ENST00000602716 FAM209BQ5JX69 171 aa13.72□□□□□ -0.21
PPFIA3-207ENST00000602716 CDPF1Q6NVV7 123 aa13.72□□□□□ -0.21
PPFIA3-207ENST00000602716 SLC24A4Q8NFF2 622 aa13.72□□□□□ -0.21
PPFIA3-207ENST00000602716 OR51G1Q8NGK1 321 aa13.72□□□□□ -0.21
PPFIA3-207ENST00000602716 A6NDX4 124 aa13.71□□□□□ -0.21
PPFIA3-207ENST00000602716 ACTL6BO94805 426 aa13.71□□□□□ -0.21
PPFIA3-207ENST00000602716 AMY1AP04745 511 aa13.71□□□□□ -0.21
PPFIA3-207ENST00000602716 CDC34P49427 236 aaPredicted RBP13.71□□□□□ -0.21
PPFIA3-207ENST00000602716 CX3CL1P78423 397 aa13.71□□□□□ -0.21
PPFIA3-207ENST00000602716 C9orf139Q6ZV77 190 aa13.71□□□□□ -0.21
PPFIA3-207ENST00000602716 OR4X1Q8NH49 305 aa13.71□□□□□ -0.21
PPFIA3-207ENST00000602716 ENY2Q9NPA8 101 aa13.71□□□□□ -0.21
PPFIA3-207ENST00000602716 YAE1D1Q9NRH1 226 aa13.71□□□□□ -0.21
PPFIA3-207ENST00000602716 NAV3Q8IVL0 2385 aa13.71□□□□□ -0.21
PPFIA3-207ENST00000602716 BAHCC1Q9P281 2608 aa13.71□□□□□ -0.21
PPFIA3-207ENST00000602716 SONP18583 2426 aaKnown RBP13.71□□□□□ -0.21
PPFIA3-207ENST00000602716 SMCO3A2RU48 225 aa13.71□□□□□ -0.22
PPFIA3-207ENST00000602716 H7BYZ3 331 aa13.71□□□□□ -0.22
PPFIA3-207ENST00000602716 RNASE2P10153 161 aaKnown RBP13.71□□□□□ -0.22
PPFIA3-207ENST00000602716 DEFA4P12838 97 aa13.71□□□□□ -0.22
PPFIA3-207ENST00000602716 C5orf56Q8N8D9 126 aa13.71□□□□□ -0.22
PPFIA3-207ENST00000602716 RBM14Q96PK6 669 aaKnown RBP13.71□□□□□ -0.22
PPFIA3-207ENST00000602716 TNFRSF19Q9NS68 423 aa13.71□□□□□ -0.22
PPFIA3-207ENST00000602716 IGHV7-81A0A0B4J1V7 117 aa13.7□□□□□ -0.22
PPFIA3-207ENST00000602716 CYSRT1A8MQ03 144 aa13.7□□□□□ -0.22
PPFIA3-207ENST00000602716 PRSS46E5RG02 174 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms