RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 TMEM158Q8WZ71 300 aa7.21□□□□□ -1.26
COMMD3-215ENST00000602574 IL36RNQ9UBH0 155 aa7.21□□□□□ -1.26
COMMD3-215ENST00000602574 MGST1P10620 155 aaKnown RBP7.2□□□□□ -1.26
COMMD3-215ENST00000602574 ZNF157P51786 506 aaPredicted RBP7.2□□□□□ -1.26
COMMD3-215ENST00000602574 GAGE2AQ6NT46 116 aa7.2□□□□□ -1.26
COMMD3-215ENST00000602574 CIARTQ8N365 385 aaPredicted RBP7.2□□□□□ -1.26
COMMD3-215ENST00000602574 C9orf85Q96MD7 179 aa7.2□□□□□ -1.26
COMMD3-215ENST00000602574 SIT1Q9Y3P8 196 aa7.2□□□□□ -1.26
COMMD3-215ENST00000602574 LHFPL6Q9Y693 200 aa7.2□□□□□ -1.26
COMMD3-215ENST00000602574 COL4A3Q01955 1670 aa7.2□□□□□ -1.26
COMMD3-215ENST00000602574 LINC01553A4QN01 128 aa7.2□□□□□ -1.26
COMMD3-215ENST00000602574 K7ERJ3 54 aa7.2□□□□□ -1.26
COMMD3-215ENST00000602574 OVOL1O14753 267 aa7.2□□□□□ -1.26
COMMD3-215ENST00000602574 SSR2P43308 183 aa7.2□□□□□ -1.26
COMMD3-215ENST00000602574 CLDN2P57739 230 aa7.2□□□□□ -1.26
COMMD3-215ENST00000602574 PLGLB1Q02325 96 aa7.2□□□□□ -1.26
COMMD3-215ENST00000602574 IL17RELQ6ZVW7 336 aa7.2□□□□□ -1.26
COMMD3-215ENST00000602574 DTX2Q86UW9 622 aa7.2□□□□□ -1.26
COMMD3-215ENST00000602574 FGFRL1Q8N441 504 aa7.2□□□□□ -1.26
COMMD3-215ENST00000602574 NPIPB3Q92617 1050 aa7.2□□□□□ -1.26
COMMD3-215ENST00000602574 ZNF747Q9BV97 191 aa7.2□□□□□ -1.26
COMMD3-215ENST00000602574 SLC25A39Q9BZJ4 359 aaPredicted RBP7.2□□□□□ -1.26
COMMD3-215ENST00000602574 FANCMQ8IYD8 2048 aa7.2□□□□□ -1.26
COMMD3-215ENST00000602574 ENSAO43768 121 aaKnown RBP7.19□□□□□ -1.26
COMMD3-215ENST00000602574 PGLYRP1O75594 196 aaPredicted RBP7.19□□□□□ -1.26
COMMD3-215ENST00000602574 PRDX2P32119 198 aa7.19□□□□□ -1.26
COMMD3-215ENST00000602574 CLLU1OSQ5K130 101 aa7.19□□□□□ -1.26
COMMD3-215ENST00000602574 IER5LQ5T953 404 aa7.19□□□□□ -1.26
COMMD3-215ENST00000602574 MFSD12Q6NUT3 480 aa7.19□□□□□ -1.26
COMMD3-215ENST00000602574 FGF22Q9HCT0 170 aa7.19□□□□□ -1.26
COMMD3-215ENST00000602574 FAM240AA0A1B0GVK7 77 aa7.18□□□□□ -1.26
COMMD3-215ENST00000602574 C15orf62A8K5M9 175 aa7.18□□□□□ -1.26
COMMD3-215ENST00000602574 NPIPB6E9PJ23 425 aa7.18□□□□□ -1.26
COMMD3-215ENST00000602574 LY6LH3BQJ8 138 aa7.18□□□□□ -1.26
COMMD3-215ENST00000602574 HLA-DMBP28068 263 aa7.18□□□□□ -1.26
COMMD3-215ENST00000602574 TMEM14EPQ6UXP3 125 aa7.18□□□□□ -1.26
COMMD3-215ENST00000602574 Q6ZQT7 251 aa7.18□□□□□ -1.26
COMMD3-215ENST00000602574 ANKRD29Q8N6D5 301 aa7.18□□□□□ -1.26
COMMD3-215ENST00000602574 ODF3Q96PU9 254 aa7.18□□□□□ -1.26
COMMD3-215ENST00000602574 RNASE7Q9H1E1 156 aaKnown RBP7.18□□□□□ -1.26
COMMD3-215ENST00000602574 SLC25A10Q9UBX3 287 aaPredicted RBP7.18□□□□□ -1.26
COMMD3-215ENST00000602574 A0A1B0GXF2 115 aa7.18□□□□□ -1.26
COMMD3-215ENST00000602574 SCO2A0A1W2PP80 73 aa7.18□□□□□ -1.26
COMMD3-215ENST00000602574 ZNF785A8K8V0 405 aa7.18□□□□□ -1.26
COMMD3-215ENST00000602574 MS4A18H0YCH9 400 aa7.18□□□□□ -1.26
COMMD3-215ENST00000602574 H0YIG0 161 aa7.18□□□□□ -1.26
COMMD3-215ENST00000602574 PRRG2O14669 202 aa7.18□□□□□ -1.26
COMMD3-215ENST00000602574 MPDU1O75352 247 aa7.18□□□□□ -1.26
COMMD3-215ENST00000602574 RENP00797 406 aa7.18□□□□□ -1.26
COMMD3-215ENST00000602574 ADAMTSL4Q6UY14 1074 aa7.18□□□□□ -1.26
COMMD3-215ENST00000602574 FAM231DQ6ZW35 169 aa7.18□□□□□ -1.26
COMMD3-215ENST00000602574 C15orf53Q8NAA6 179 aa7.18□□□□□ -1.26
COMMD3-215ENST00000602574 MDS2Q8NDY4 140 aa7.18□□□□□ -1.26
COMMD3-215ENST00000602574 RND1Q92730 232 aa7.18□□□□□ -1.26
COMMD3-215ENST00000602574 KIF26BQ2KJY2 2108 aa7.18□□□□□ -1.26
COMMD3-215ENST00000602574 FAM236AA0A1B0GUQ0 79 aa7.17□□□□□ -1.26
COMMD3-215ENST00000602574 FAM236BA0A1B0GV22 79 aa7.17□□□□□ -1.26
COMMD3-215ENST00000602574 TMEM89A2RUT3 159 aa7.17□□□□□ -1.26
COMMD3-215ENST00000602574 TMEM202A6NGA9 273 aa7.17□□□□□ -1.26
COMMD3-215ENST00000602574 DPM2O94777 84 aa7.17□□□□□ -1.26
COMMD3-215ENST00000602574 SCGB1C2P0DMR2 95 aa7.17□□□□□ -1.26
COMMD3-215ENST00000602574 COX7CP15954 63 aa7.17□□□□□ -1.26
COMMD3-215ENST00000602574 NBL1P41271 181 aa7.17□□□□□ -1.26
COMMD3-215ENST00000602574 C6orf201Q7Z4U5 140 aa7.17□□□□□ -1.26
COMMD3-215ENST00000602574 ABHD12Q8N2K0 398 aa7.17□□□□□ -1.26
COMMD3-215ENST00000602574 A0A1B0GWA3 101 aa7.17□□□□□ -1.26
COMMD3-215ENST00000602574 C16orf97H3BN30 126 aa7.17□□□□□ -1.26
COMMD3-215ENST00000602574 H3BSH0 61 aa7.17□□□□□ -1.26
COMMD3-215ENST00000602574 ZIC3O60481 467 aa7.17□□□□□ -1.26
COMMD3-215ENST00000602574 UBE2D3P61077 147 aa7.17□□□□□ -1.26
COMMD3-215ENST00000602574 UBE2D2P62837 147 aa7.17□□□□□ -1.26
COMMD3-215ENST00000602574 ZNF672Q499Z4 452 aaPredicted RBP7.17□□□□□ -1.26
COMMD3-215ENST00000602574 PRIMA1Q86XR5 153 aa7.17□□□□□ -1.26
COMMD3-215ENST00000602574 FAM57AQ8TBR7 257 aa7.17□□□□□ -1.26
COMMD3-215ENST00000602574 WFDC5Q8TCV5 224 aa7.17□□□□□ -1.26
COMMD3-215ENST00000602574 CHCHD5Q9BSY4 110 aa7.17□□□□□ -1.26
COMMD3-215ENST00000602574 PSENENQ9NZ42 101 aa7.17□□□□□ -1.26
COMMD3-215ENST00000602574 PYGO1Q9Y3Y4 419 aa7.17□□□□□ -1.26
COMMD3-215ENST00000602574 PTPRSQ13332 1948 aa7.17□□□□□ -1.26
COMMD3-215ENST00000602574 PTPRBP23467 1997 aa7.16□□□□□ -1.26
COMMD3-215ENST00000602574 IGKV1D-8A0A087WSZ0 117 aa7.16□□□□□ -1.26
COMMD3-215ENST00000602574 UBE2L5PA0A1B0GUS4 154 aa7.16□□□□□ -1.26
COMMD3-215ENST00000602574 RBAKDNA6NC62 111 aa7.16□□□□□ -1.26
COMMD3-215ENST00000602574 SH2D7A6NKC9 451 aaPredicted RBP7.16□□□□□ -1.26
COMMD3-215ENST00000602574 SYNGR2O43760 224 aa7.16□□□□□ -1.26
COMMD3-215ENST00000602574 CT62P0C5K7 136 aa7.16□□□□□ -1.26
COMMD3-215ENST00000602574 RPL13AP40429 203 aaKnown RBP7.16□□□□□ -1.26
COMMD3-215ENST00000602574 PRDX1Q06830 199 aaKnown RBP7.16□□□□□ -1.26
COMMD3-215ENST00000602574 FOXC1Q12948 553 aa7.16□□□□□ -1.26
COMMD3-215ENST00000602574 Q6ZVL8 140 aa7.16□□□□□ -1.26
COMMD3-215ENST00000602574 POM121L12Q8N7R1 296 aa7.16□□□□□ -1.26
COMMD3-215ENST00000602574 CNRIP1Q96F85 164 aaPredicted RBP7.16□□□□□ -1.26
COMMD3-215ENST00000602574 RITA1Q96K30 269 aa7.16□□□□□ -1.26
COMMD3-215ENST00000602574 TRAV8-2A0A0B4J237 113 aa7.16□□□□□ -1.26
COMMD3-215ENST00000602574 J3QQQ9 107 aa7.16□□□□□ -1.26
COMMD3-215ENST00000602574 SRYQ05066 204 aa7.16□□□□□ -1.26
COMMD3-215ENST00000602574 OR52N5Q8NH56 324 aa7.16□□□□□ -1.26
COMMD3-215ENST00000602574 SCAMP4Q969E2 229 aa7.16□□□□□ -1.26
COMMD3-215ENST00000602574 PLA2G2FQ9BZM2 168 aa7.16□□□□□ -1.26
COMMD3-215ENST00000602574 ALKBH4Q9NXW9 302 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms