RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 SLC25A4P12235 298 aa16.66■□□□□ 0.26
SSBP4-209ENST00000601357 AKR1C4P17516 323 aa16.66■□□□□ 0.26
SSBP4-209ENST00000601357 ATF4P18848 351 aaPredicted RBP16.66■□□□□ 0.26
SSBP4-209ENST00000601357 METTL26Q96S19 204 aa16.66■□□□□ 0.26
SSBP4-209ENST00000601357 CSTL1Q9H114 145 aa16.66■□□□□ 0.26
SSBP4-209ENST00000601357 HSPB7Q9UBY9 170 aa16.66■□□□□ 0.26
SSBP4-209ENST00000601357 SHPKQ9UHJ6 478 aa16.66■□□□□ 0.26
SSBP4-209ENST00000601357 EPPK1P58107 5090 aaKnown RBP16.65■□□□□ 0.26
SSBP4-209ENST00000601357 A0A1W2PS18 150 aa16.65■□□□□ 0.26
SSBP4-209ENST00000601357 NXPH3O95157 252 aa16.65■□□□□ 0.26
SSBP4-209ENST00000601357 CCR6P51684 374 aa16.65■□□□□ 0.26
SSBP4-209ENST00000601357 RND2P52198 227 aa16.65■□□□□ 0.26
SSBP4-209ENST00000601357 LYZL2Q7Z4W2 148 aa16.65■□□□□ 0.26
SSBP4-209ENST00000601357 FAM24BQ8N5W8 94 aa16.65■□□□□ 0.26
SSBP4-209ENST00000601357 OR1S2Q8NGQ3 325 aa16.65■□□□□ 0.26
SSBP4-209ENST00000601357 ALMS1Q8TCU4 4167 aa16.65■□□□□ 0.26
SSBP4-209ENST00000601357 DNASE2O00115 360 aaPredicted RBP16.64■□□□□ 0.25
SSBP4-209ENST00000601357 NPY1RP25929 384 aa16.64■□□□□ 0.25
SSBP4-209ENST00000601357 YPEL3P61236 119 aaPredicted RBP16.64■□□□□ 0.25
SSBP4-209ENST00000601357 SMCO1Q147U7 214 aa16.64■□□□□ 0.25
SSBP4-209ENST00000601357 ZNF79Q15937 498 aa16.64■□□□□ 0.25
SSBP4-209ENST00000601357 U3KQE9 123 aa16.64■□□□□ 0.25
SSBP4-209ENST00000601357 MPTX1A8MV57 137 aa16.63■□□□□ 0.25
SSBP4-209ENST00000601357 OR10J1P30954 320 aa16.63■□□□□ 0.25
SSBP4-209ENST00000601357 P2RY1P47900 373 aa16.63■□□□□ 0.25
SSBP4-209ENST00000601357 RPL11P62913 178 aaKnown RBP16.63■□□□□ 0.25
SSBP4-209ENST00000601357 SRPXP78539 464 aa16.63■□□□□ 0.25
SSBP4-209ENST00000601357 K7EQG2 157 aa16.62■□□□□ 0.25
SSBP4-209ENST00000601357 ANXA3P12429 323 aa16.62■□□□□ 0.25
SSBP4-209ENST00000601357 FAUP35544 74 aaKnown RBP16.62■□□□□ 0.25
SSBP4-209ENST00000601357 DEFB131AP59861 70 aa16.62■□□□□ 0.25
SSBP4-209ENST00000601357 PYDC2Q56P42 97 aa16.62■□□□□ 0.25
SSBP4-209ENST00000601357 ETFRF1Q6IPR1 90 aa16.62■□□□□ 0.25
SSBP4-209ENST00000601357 NOXA1Q86UR1 476 aa16.62■□□□□ 0.25
SSBP4-209ENST00000601357 LGI3Q8N145 548 aa16.62■□□□□ 0.25
SSBP4-209ENST00000601357 GATAD1Q8WUU5 269 aa16.62■□□□□ 0.25
SSBP4-209ENST00000601357 RBM38Q9H0Z9 239 aaKnown RBP16.62■□□□□ 0.25
SSBP4-209ENST00000601357 AP3S2P59780 193 aa16.61■□□□□ 0.25
SSBP4-209ENST00000601357 RBMS2Q15434 407 aaKnown RBP16.61■□□□□ 0.25
SSBP4-209ENST00000601357 LEMD1Q68G75 181 aa16.61■□□□□ 0.25
SSBP4-209ENST00000601357 TOMM5Q8N4H5 51 aa16.61■□□□□ 0.25
SSBP4-209ENST00000601357 DTD1Q8TEA8 209 aa16.61■□□□□ 0.25
SSBP4-209ENST00000601357 DCANP1Q8TF63 244 aa16.61■□□□□ 0.25
SSBP4-209ENST00000601357 RBKSQ9H477 322 aa16.61■□□□□ 0.25
SSBP4-209ENST00000601357 RABAC1Q9UI14 185 aa16.61■□□□□ 0.25
SSBP4-209ENST00000601357 U3KQ87 197 aa16.61■□□□□ 0.25
SSBP4-209ENST00000601357 TMEM128Q5BJH2 165 aa16.6■□□□□ 0.25
SSBP4-209ENST00000601357 CCDC190Q86UF4 302 aa16.6■□□□□ 0.25
SSBP4-209ENST00000601357 Q8WTZ3 238 aa16.6■□□□□ 0.25
SSBP4-209ENST00000601357 DEDD2Q8WXF8 326 aa16.6■□□□□ 0.25
SSBP4-209ENST00000601357 NPIPB3Q92617 1050 aa16.6■□□□□ 0.25
SSBP4-209ENST00000601357 GRAMD2BQ96HH9 432 aa16.6■□□□□ 0.25
SSBP4-209ENST00000601357 NARS2Q96I59 477 aaKnown RBP16.6■□□□□ 0.25
SSBP4-209ENST00000601357 DUXBA0A1W2PPF3 345 aa16.59■□□□□ 0.25
SSBP4-209ENST00000601357 CXorf65A6NEN9 183 aa16.59■□□□□ 0.25
SSBP4-209ENST00000601357 IFNA10P01566 189 aa16.59■□□□□ 0.25
SSBP4-209ENST00000601357 PMS2P11Q13670 270 aa16.59■□□□□ 0.25
SSBP4-209ENST00000601357 USF2Q15853 346 aaPredicted RBP16.59■□□□□ 0.25
SSBP4-209ENST00000601357 STXBP6Q8NFX7 210 aa16.59■□□□□ 0.25
SSBP4-209ENST00000601357 GLMPQ8WWB7 406 aa16.59■□□□□ 0.25
SSBP4-209ENST00000601357 PIGBOS1A0A0B4J2F0 54 aa16.58■□□□□ 0.24
SSBP4-209ENST00000601357 NUPR2A6NF83 97 aa16.58■□□□□ 0.24
SSBP4-209ENST00000601357 PITX3O75364 302 aa16.58■□□□□ 0.24
SSBP4-209ENST00000601357 HNRNPCP07910 306 aaKnown RBP eCLIP16.58■□□□□ 0.24
SSBP4-209ENST00000601357 S100A5P33763 92 aa16.58■□□□□ 0.24
SSBP4-209ENST00000601357 C16orf54Q6UWD8 224 aa16.58■□□□□ 0.24
SSBP4-209ENST00000601357 TMED4Q7Z7H5 227 aa16.58■□□□□ 0.24
SSBP4-209ENST00000601357 TMEM217Q8N7C4 229 aa16.58■□□□□ 0.24
SSBP4-209ENST00000601357 LRTM2Q8N967 370 aa16.58■□□□□ 0.24
SSBP4-209ENST00000601357 ACY3Q96HD9 319 aa16.58■□□□□ 0.24
SSBP4-209ENST00000601357 CCDC160A6NGH7 325 aa16.57■□□□□ 0.24
SSBP4-209ENST00000601357 TOMM40O96008 361 aa16.57■□□□□ 0.24
SSBP4-209ENST00000601357 CA1P00915 261 aaPredicted RBP16.57■□□□□ 0.24
SSBP4-209ENST00000601357 ATP5IP56385 69 aaPredicted RBP16.57■□□□□ 0.24
SSBP4-209ENST00000601357 RARRES2Q99969 163 aa16.57■□□□□ 0.24
SSBP4-209ENST00000601357 SLC25A21Q9BQT8 299 aaPredicted RBP16.57■□□□□ 0.24
SSBP4-209ENST00000601357 IL4P05112 153 aa16.56■□□□□ 0.24
SSBP4-209ENST00000601357 CEMP1Q6PRD7 247 aaPredicted RBP16.56■□□□□ 0.24
SSBP4-209ENST00000601357 TRPT1Q86TN4 253 aaKnown RBP16.56■□□□□ 0.24
SSBP4-209ENST00000601357 OR1S1Q8NH92 325 aa16.56■□□□□ 0.24
SSBP4-209ENST00000601357 HELTA6NFD8 242 aa16.55■□□□□ 0.24
SSBP4-209ENST00000601357 ZNF701M0R085 212 aaPredicted RBP16.55■□□□□ 0.24
SSBP4-209ENST00000601357 ZNF688P0C7X2 276 aa16.55■□□□□ 0.24
SSBP4-209ENST00000601357 RD3LP0DJH9 198 aa16.55■□□□□ 0.24
SSBP4-209ENST00000601357 SLC25A6P12236 298 aa16.55■□□□□ 0.24
SSBP4-209ENST00000601357 STHQ8IWL8 128 aa16.55■□□□□ 0.24
SSBP4-209ENST00000601357 OR11H2Q8NH07 326 aa16.55■□□□□ 0.24
SSBP4-209ENST00000601357 LINC00476Q8WZB0 136 aa16.55■□□□□ 0.24
SSBP4-209ENST00000601357 C11orf68Q9H3H3 251 aaKnown RBP16.55■□□□□ 0.24
SSBP4-209ENST00000601357 BUB3O43684 328 aa16.54■□□□□ 0.24
SSBP4-209ENST00000601357 GIG44P09565 113 aaPredicted RBP16.54■□□□□ 0.24
SSBP4-209ENST00000601357 PSG1P11464 419 aa16.54■□□□□ 0.24
SSBP4-209ENST00000601357 VAMP1P23763 118 aa16.54■□□□□ 0.24
SSBP4-209ENST00000601357 GPX4P36969 197 aaPredicted RBP16.54■□□□□ 0.24
SSBP4-209ENST00000601357 EIF2B2P49770 351 aaKnown RBP16.54■□□□□ 0.24
SSBP4-209ENST00000601357 AP2S1P53680 142 aaPredicted RBP16.54■□□□□ 0.24
SSBP4-209ENST00000601357 IFNA4P05014 189 aa16.53■□□□□ 0.24
SSBP4-209ENST00000601357 GAMTQ14353 236 aa16.53■□□□□ 0.24
SSBP4-209ENST00000601357 SRRQ9GZT4 340 aa16.53■□□□□ 0.24
SSBP4-209ENST00000601357 AGRNO00468 2067 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 232.5 ms