RNA–Protein interactions for RNA: ENST00000601324.1

VRK3-222, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-222ENST00000601324 A0A1B0GWB2 263 aa2.84□□□□□ -1.95
VRK3-222ENST00000601324 FAM231BA6NCW3 169 aa2.84□□□□□ -1.95
VRK3-222ENST00000601324 H3BN98 237 aa2.84□□□□□ -1.95
VRK3-222ENST00000601324 H7C2Y5 167 aa2.84□□□□□ -1.95
VRK3-222ENST00000601324 K7EMT4 169 aa2.84□□□□□ -1.95
VRK3-222ENST00000601324 M0R129 80 aa2.84□□□□□ -1.95
VRK3-222ENST00000601324 NDUFAB1O14561 156 aa2.84□□□□□ -1.95
VRK3-222ENST00000601324 DYNC1I1O14576 645 aa2.84□□□□□ -1.95
VRK3-222ENST00000601324 GLAP06280 429 aa2.84□□□□□ -1.95
VRK3-222ENST00000601324 COX4I1P13073 169 aa2.84□□□□□ -1.95
VRK3-222ENST00000601324 FUT3P21217 361 aa2.84□□□□□ -1.95
VRK3-222ENST00000601324 UBE2KP61086 200 aa2.84□□□□□ -1.95
VRK3-222ENST00000601324 OXA1LQ15070 435 aa2.84□□□□□ -1.95
VRK3-222ENST00000601324 LCE3EQ5T5B0 92 aa2.84□□□□□ -1.95
VRK3-222ENST00000601324 NXNL2Q5VZ03 156 aa2.84□□□□□ -1.95
VRK3-222ENST00000601324 LPCAT4Q643R3 524 aa2.84□□□□□ -1.95
VRK3-222ENST00000601324 OR2T5Q6IEZ7 315 aa2.84□□□□□ -1.95
VRK3-222ENST00000601324 CROCCP2Q86T23 111 aa2.84□□□□□ -1.95
VRK3-222ENST00000601324 HS3ST5Q8IZT8 346 aa2.84□□□□□ -1.95
VRK3-222ENST00000601324 OR2T29Q8NH02 315 aa2.84□□□□□ -1.95
VRK3-222ENST00000601324 MCUR1Q96AQ8 359 aa2.84□□□□□ -1.95
VRK3-222ENST00000601324 PELI1Q96FA3 418 aa2.84□□□□□ -1.95
VRK3-222ENST00000601324 RNF2Q99496 336 aa2.84□□□□□ -1.95
VRK3-222ENST00000601324 TPPP3Q9BW30 176 aa2.84□□□□□ -1.95
VRK3-222ENST00000601324 C6orf62Q9GZU0 229 aaPredicted RBP2.84□□□□□ -1.95
VRK3-222ENST00000601324 DAZ1Q9NQZ3 744 aaKnown RBP2.84□□□□□ -1.95
VRK3-222ENST00000601324 TVP23BQ9NYZ1 205 aa2.84□□□□□ -1.95
VRK3-222ENST00000601324 SMPXQ9UHP9 88 aa2.84□□□□□ -1.95
VRK3-222ENST00000601324 ING4Q9UNL4 249 aa2.84□□□□□ -1.95
VRK3-222ENST00000601324 ZNF257Q9Y2Q1 563 aa2.84□□□□□ -1.95
VRK3-222ENST00000601324 UFC1Q9Y3C8 167 aa2.84□□□□□ -1.95
VRK3-222ENST00000601324 SAMHD1Q9Y3Z3 626 aaKnown RBP2.84□□□□□ -1.95
VRK3-222ENST00000601324 LINC00588Q9Y4M8 146 aa2.84□□□□□ -1.95
VRK3-222ENST00000601324 S4R3C0 116 aa2.84□□□□□ -1.95
VRK3-222ENST00000601324 IGKV1-6A0A0C4DH72 117 aa2.83□□□□□ -1.96
VRK3-222ENST00000601324 ZNF705FA8MVS1 300 aaPredicted RBP2.83□□□□□ -1.96
VRK3-222ENST00000601324 MCRIP1C9JLW8 97 aa2.83□□□□□ -1.96
VRK3-222ENST00000601324 H0Y9J4 135 aa2.83□□□□□ -1.96
VRK3-222ENST00000601324 MRPS14O60783 128 aaKnown RBP2.83□□□□□ -1.96
VRK3-222ENST00000601324 NAPSAO96009 420 aa2.83□□□□□ -1.96
VRK3-222ENST00000601324 ZNF705DP0CH99 300 aaPredicted RBP2.83□□□□□ -1.96
VRK3-222ENST00000601324 ZNF705BP0CI00 300 aaPredicted RBP2.83□□□□□ -1.96
VRK3-222ENST00000601324 AZU1P20160 251 aa2.83□□□□□ -1.96
VRK3-222ENST00000601324 ATP6V1B2P21281 511 aa2.83□□□□□ -1.96
VRK3-222ENST00000601324 CALB2P22676 271 aa2.83□□□□□ -1.96
VRK3-222ENST00000601324 CMC4P56277 68 aaPredicted RBP2.83□□□□□ -1.96
VRK3-222ENST00000601324 RSU1Q15404 277 aa2.83□□□□□ -1.96
VRK3-222ENST00000601324 TP53I3Q53FA7 332 aa2.83□□□□□ -1.96
VRK3-222ENST00000601324 GLT8D1Q68CQ7 371 aa2.83□□□□□ -1.96
VRK3-222ENST00000601324 C12orf73Q69YU5 71 aa2.83□□□□□ -1.96
VRK3-222ENST00000601324 LAMTOR1Q6IAA8 161 aa2.83□□□□□ -1.96
VRK3-222ENST00000601324 ZNF705AQ6ZN79 300 aaPredicted RBP2.83□□□□□ -1.96
VRK3-222ENST00000601324 IDO2Q6ZQW0 420 aa2.83□□□□□ -1.96
VRK3-222ENST00000601324 SSX9Q7RTT3 188 aa2.83□□□□□ -1.96
VRK3-222ENST00000601324 STX19Q8N4C7 294 aa2.83□□□□□ -1.96
VRK3-222ENST00000601324 OR5D14Q8NGL3 314 aa2.83□□□□□ -1.96
VRK3-222ENST00000601324 DEFB104AQ8WTQ1 72 aa2.83□□□□□ -1.96
VRK3-222ENST00000601324 GIMAP1Q8WWP7 306 aa2.83□□□□□ -1.96
VRK3-222ENST00000601324 GALMQ96C23 342 aa2.83□□□□□ -1.96
VRK3-222ENST00000601324 TBX5Q99593 518 aa2.83□□□□□ -1.96
VRK3-222ENST00000601324 TXN2Q99757 166 aa2.83□□□□□ -1.96
VRK3-222ENST00000601324 METTL9Q9H1A3 318 aa2.83□□□□□ -1.96
VRK3-222ENST00000601324 ZNF430Q9H8G1 570 aaPredicted RBP2.83□□□□□ -1.96
VRK3-222ENST00000601324 EFCAB1Q9HAE3 211 aa2.83□□□□□ -1.96
VRK3-222ENST00000601324 SPACA1Q9HBV2 294 aa2.83□□□□□ -1.96
VRK3-222ENST00000601324 TBC1D24Q9ULP9 559 aa2.83□□□□□ -1.96
VRK3-222ENST00000601324 TRBV6-6A0A0A6YYG2 114 aa2.82□□□□□ -1.96
VRK3-222ENST00000601324 TRBV7-1A0A0A6YYK4 115 aa2.82□□□□□ -1.96
VRK3-222ENST00000601324 TRAV2A0A0B4J234 112 aa2.82□□□□□ -1.96
VRK3-222ENST00000601324 NOL3O60936 208 aaKnown RBP2.82□□□□□ -1.96
VRK3-222ENST00000601324 IGHV3-48P01763 117 aa2.82□□□□□ -1.96
VRK3-222ENST00000601324 ZNF735P0CB33 412 aa2.82□□□□□ -1.96
VRK3-222ENST00000601324 GTF2F2P13984 249 aa2.82□□□□□ -1.96
VRK3-222ENST00000601324 RPA2P15927 270 aa2.82□□□□□ -1.96
VRK3-222ENST00000601324 IGFBP3P17936 291 aaPredicted RBP2.82□□□□□ -1.96
VRK3-222ENST00000601324 NPY1RP25929 384 aa2.82□□□□□ -1.96
VRK3-222ENST00000601324 WNT4P56705 351 aa2.82□□□□□ -1.96
VRK3-222ENST00000601324 DEFB131AP59861 70 aa2.82□□□□□ -1.96
VRK3-222ENST00000601324 PTGES3Q15185 160 aaKnown RBP2.82□□□□□ -1.96
VRK3-222ENST00000601324 TNXAQ16473 311 aa2.82□□□□□ -1.96
VRK3-222ENST00000601324 Q6ZSA8 131 aa2.82□□□□□ -1.96
VRK3-222ENST00000601324 GID4Q8IVV7 300 aa2.82□□□□□ -1.96
VRK3-222ENST00000601324 C15orf53Q8NAA6 179 aa2.82□□□□□ -1.96
VRK3-222ENST00000601324 EEF1AKMT3Q96AZ1 226 aa2.82□□□□□ -1.96
VRK3-222ENST00000601324 OR10C1Q96KK4 312 aa2.82□□□□□ -1.96
VRK3-222ENST00000601324 SPIN2AQ99865 258 aa2.82□□□□□ -1.96
VRK3-222ENST00000601324 SPIN2BQ9BPZ2 258 aa2.82□□□□□ -1.96
VRK3-222ENST00000601324 TMEM70Q9BUB7 260 aa2.82□□□□□ -1.96
VRK3-222ENST00000601324 RIBC2Q9H4K1 309 aa2.82□□□□□ -1.96
VRK3-222ENST00000601324 TMEM14BQ9NUH8 114 aa2.82□□□□□ -1.96
VRK3-222ENST00000601324 TAS2R4Q9NYW5 299 aa2.82□□□□□ -1.96
VRK3-222ENST00000601324 WARS2Q9UGM6 360 aaKnown RBP2.82□□□□□ -1.96
VRK3-222ENST00000601324 LRRC42Q9Y546 428 aa2.82□□□□□ -1.96
VRK3-222ENST00000601324 PEX16Q9Y5Y5 336 aa2.82□□□□□ -1.96
VRK3-222ENST00000601324 IGHV7-4-1A0A0J9YVY3 117 aa2.81□□□□□ -1.96
VRK3-222ENST00000601324 NDUFA4O00483 81 aa2.81□□□□□ -1.96
VRK3-222ENST00000601324 ZNF780AO75290 641 aaPredicted RBP2.81□□□□□ -1.96
VRK3-222ENST00000601324 PDCD6O75340 191 aa2.81□□□□□ -1.96
VRK3-222ENST00000601324 LALBAP00709 142 aa2.81□□□□□ -1.96
VRK3-222ENST00000601324 APOA2P02652 100 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms