RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 C20orf24Q9BUV8 137 aa15.83■□□□□ 0.13
PNKP-214ENST00000600573 MRPL32Q9BYC8 188 aaKnown RBP15.83■□□□□ 0.13
PNKP-214ENST00000600573 PTPN13Q12923 2485 aa15.83■□□□□ 0.12
PNKP-214ENST00000600573 A6NDX4 124 aa15.83■□□□□ 0.12
PNKP-214ENST00000600573 I3L2K1 104 aa15.83■□□□□ 0.12
PNKP-214ENST00000600573 GCHFRP30047 84 aa15.83■□□□□ 0.12
PNKP-214ENST00000600573 KLK9Q2XQG4 91 aa15.83■□□□□ 0.12
PNKP-214ENST00000600573 SPATA31B1PQ5VZV4 182 aa15.83■□□□□ 0.12
PNKP-214ENST00000600573 OR4F5Q8NH21 305 aa15.83■□□□□ 0.12
PNKP-214ENST00000600573 OR4X1Q8NH49 305 aa15.83■□□□□ 0.12
PNKP-214ENST00000600573 OR4F4Q96R69 305 aa15.83■□□□□ 0.12
PNKP-214ENST00000600573 TRGV9Q99603 122 aa15.83■□□□□ 0.12
PNKP-214ENST00000600573 KLK9Q9UKQ9 250 aa15.83■□□□□ 0.12
PNKP-214ENST00000600573 ANKRD17O75179 2603 aaKnown RBP15.82■□□□□ 0.12
PNKP-214ENST00000600573 FSHBP01225 129 aa15.82■□□□□ 0.12
PNKP-214ENST00000600573 TAS2R45P59539 299 aa15.82■□□□□ 0.12
PNKP-214ENST00000600573 FAM78BQ5VT40 261 aa15.82■□□□□ 0.12
PNKP-214ENST00000600573 MAPK1IP1LQ8NDC0 245 aa15.82■□□□□ 0.12
PNKP-214ENST00000600573 TXNDC17Q9BRA2 123 aa15.82■□□□□ 0.12
PNKP-214ENST00000600573 SEPSECSQ9HD40 501 aaKnown RBP15.82■□□□□ 0.12
PNKP-214ENST00000600573 TECRQ9NZ01 308 aaKnown RBP15.82■□□□□ 0.12
PNKP-214ENST00000600573 IGKV1D-37A0A075B6S9 117 aa15.81■□□□□ 0.12
PNKP-214ENST00000600573 C11orf94C9JXX5 98 aa15.81■□□□□ 0.12
PNKP-214ENST00000600573 FABP1P07148 127 aa15.81■□□□□ 0.12
PNKP-214ENST00000600573 EGR2P11161 476 aaPredicted RBP15.81■□□□□ 0.12
PNKP-214ENST00000600573 PNRC1Q12796 327 aaPredicted RBP15.81■□□□□ 0.12
PNKP-214ENST00000600573 ASPHD1Q5U4P2 390 aa15.81■□□□□ 0.12
PNKP-214ENST00000600573 C19orf35Q6ZS72 473 aa15.81■□□□□ 0.12
PNKP-214ENST00000600573 OR1L4Q8NGR5 311 aa15.81■□□□□ 0.12
PNKP-214ENST00000600573 PFDN5Q99471 154 aa15.81■□□□□ 0.12
PNKP-214ENST00000600573 FAM103A1Q9BTL3 118 aaKnown RBP15.81■□□□□ 0.12
PNKP-214ENST00000600573 MRPL36Q9P0J6 103 aaKnown RBP15.81■□□□□ 0.12
PNKP-214ENST00000600573 H3BUX3 64 aa15.8■□□□□ 0.12
PNKP-214ENST00000600573 PDE6DO43924 150 aa15.8■□□□□ 0.12
PNKP-214ENST00000600573 GATA2P23769 480 aaPredicted RBP15.8■□□□□ 0.12
PNKP-214ENST00000600573 NDPQ00604 133 aa15.8■□□□□ 0.12
PNKP-214ENST00000600573 MIR17HGQ75NE6 70 aa15.8■□□□□ 0.12
PNKP-214ENST00000600573 OR5R1Q8NH85 324 aa15.8■□□□□ 0.12
PNKP-214ENST00000600573 FAM110DQ8TAY7 271 aaPredicted RBP15.8■□□□□ 0.12
PNKP-214ENST00000600573 NAV2Q8IVL1 2488 aa15.8■□□□□ 0.12
PNKP-214ENST00000600573 IGLV11-55A0A075B6I3 123 aa15.79■□□□□ 0.12
PNKP-214ENST00000600573 TRAV30A0A087WSZ9 112 aa15.79■□□□□ 0.12
PNKP-214ENST00000600573 ZNF727A8MUV8 499 aa15.79■□□□□ 0.12
PNKP-214ENST00000600573 F6UZH7 168 aa15.79■□□□□ 0.12
PNKP-214ENST00000600573 COX7A2P2O60397 106 aa15.79■□□□□ 0.12
PNKP-214ENST00000600573 IGHV3-48P01763 117 aa15.79■□□□□ 0.12
PNKP-214ENST00000600573 AKR1C3P42330 323 aa15.79■□□□□ 0.12
PNKP-214ENST00000600573 CRIP2P52943 208 aaPredicted RBP15.79■□□□□ 0.12
PNKP-214ENST00000600573 ZNF48Q96MX3 618 aaPredicted RBP15.79■□□□□ 0.12
PNKP-214ENST00000600573 TNFRSF19Q9NS68 423 aa15.79■□□□□ 0.12
PNKP-214ENST00000600573 DMRT1Q9Y5R6 373 aa15.79■□□□□ 0.12
PNKP-214ENST00000600573 ARL2-SNX15V9GYD0 113 aa15.79■□□□□ 0.12
PNKP-214ENST00000600573 NBPF19A0A087WUL8 3843 aa15.79■□□□□ 0.12
PNKP-214ENST00000600573 SCGB2A1O75556 95 aa15.79■□□□□ 0.12
PNKP-214ENST00000600573 UBE2G2P60604 165 aa15.79■□□□□ 0.12
PNKP-214ENST00000600573 CST9LP1Q5W188 147 aa15.79■□□□□ 0.12
PNKP-214ENST00000600573 PQLC2Q6ZP29 291 aa15.79■□□□□ 0.12
PNKP-214ENST00000600573 SMIM7Q9BQ49 75 aa15.79■□□□□ 0.12
PNKP-214ENST00000600573 HSPB9Q9BQS6 159 aa15.79■□□□□ 0.12
PNKP-214ENST00000600573 TMEM167BQ9NRX6 74 aa15.79■□□□□ 0.12
PNKP-214ENST00000600573 CSMD2Q7Z408 3487 aa15.78■□□□□ 0.12
PNKP-214ENST00000600573 A0A087WWC5 75 aa15.78■□□□□ 0.12
PNKP-214ENST00000600573 ELOA3CA0A087WX78 387 aaPredicted RBP15.78■□□□□ 0.12
PNKP-214ENST00000600573 PSMB11A5LHX3 300 aa15.78■□□□□ 0.12
PNKP-214ENST00000600573 B4DEV8 164 aa15.78■□□□□ 0.12
PNKP-214ENST00000600573 CLN5O75503 358 aa15.78■□□□□ 0.12
PNKP-214ENST00000600573 C15orf54Q8N8G6 183 aa15.78■□□□□ 0.12
PNKP-214ENST00000600573 WFDC11Q8NEX6 87 aa15.78■□□□□ 0.12
PNKP-214ENST00000600573 FANCD2OSQ96PS1 177 aa15.78■□□□□ 0.12
PNKP-214ENST00000600573 TUBA4BQ9H853 241 aa15.78■□□□□ 0.12
PNKP-214ENST00000600573 DNAJC4Q9NNZ3 241 aa15.78■□□□□ 0.12
PNKP-214ENST00000600573 K7EIM0 57 aa15.77■□□□□ 0.12
PNKP-214ENST00000600573 ZNF90Q03938 601 aa15.77■□□□□ 0.12
PNKP-214ENST00000600573 UNQ5815/PRO19632Q6UWF5 114 aa15.77■□□□□ 0.12
PNKP-214ENST00000600573 TMEM219Q86XT9 240 aa15.77■□□□□ 0.12
PNKP-214ENST00000600573 RPUSD4Q96CM3 377 aaKnown RBP15.77■□□□□ 0.12
PNKP-214ENST00000600573 TXN2Q99757 166 aa15.77■□□□□ 0.12
PNKP-214ENST00000600573 TMUB1Q9BVT8 246 aa15.77■□□□□ 0.12
PNKP-214ENST00000600573 PARLQ9H300 379 aa15.77■□□□□ 0.12
PNKP-214ENST00000600573 NAT8Q9UHE5 227 aa15.77■□□□□ 0.12
PNKP-214ENST00000600573 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.77■□□□□ 0.117e-7■■■■□ 24.2
PNKP-214ENST00000600573 ATP6V0E1O15342 81 aa15.76■□□□□ 0.11
PNKP-214ENST00000600573 C8orf88P0DMB2 117 aa15.76■□□□□ 0.11
PNKP-214ENST00000600573 ATP5G3P48201 142 aa15.76■□□□□ 0.11
PNKP-214ENST00000600573 MFAP4P55083 255 aa15.76■□□□□ 0.11
PNKP-214ENST00000600573 ZNF674Q2M3X9 581 aa15.76■□□□□ 0.11
PNKP-214ENST00000600573 DEFB112Q30KQ8 113 aa15.76■□□□□ 0.11
PNKP-214ENST00000600573 C10orf113Q5VZT2 155 aa15.76■□□□□ 0.11
PNKP-214ENST00000600573 VN1R17PQ8TDU5 208 aa15.76■□□□□ 0.11
PNKP-214ENST00000600573 SDF2L1Q9HCN8 221 aa15.76■□□□□ 0.11
PNKP-214ENST00000600573 FCGR2BP31994 310 aaPredicted RBP15.76■□□□□ 0.11
PNKP-214ENST00000600573 PLP1P60201 277 aa15.76■□□□□ 0.11
PNKP-214ENST00000600573 TMEM37Q8WXS4 190 aa15.76■□□□□ 0.11
PNKP-214ENST00000600573 PRDM13Q9H4Q3 707 aa15.76■□□□□ 0.11
PNKP-214ENST00000600573 VPS13CQ709C8 3753 aa15.75■□□□□ 0.11
PNKP-214ENST00000600573 IGHV3-21A0A0B4J1V1 117 aa15.75■□□□□ 0.11
PNKP-214ENST00000600573 OR7C2O60412 319 aa15.75■□□□□ 0.11
PNKP-214ENST00000600573 AMY1AP04745 511 aa15.75■□□□□ 0.11
PNKP-214ENST00000600573 IGF1P05019 195 aa15.75■□□□□ 0.11
PNKP-214ENST00000600573 ATF4P18848 351 aaPredicted RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms