RNA–Protein interactions for RNA: ENST00000600310.5

UPF1-209, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-209ENST00000600310 BEAN1Q3B7T3 259 aa14.72□□□□□ -0.05
UPF1-209ENST00000600310 ZNF600Q6ZNG1 722 aa14.72□□□□□ -0.05
UPF1-209ENST00000600310 OR11H7Q8NGC8 314 aa14.72□□□□□ -0.05
UPF1-209ENST00000600310 PPP1R1CQ8WVI7 109 aa14.72□□□□□ -0.05
UPF1-209ENST00000600310 UFC1Q9Y3C8 167 aa14.72□□□□□ -0.05
UPF1-209ENST00000600310 TMEM213A2RRL7 107 aa14.71□□□□□ -0.05
UPF1-209ENST00000600310 C2orf70A6NJV1 201 aa14.71□□□□□ -0.05
UPF1-209ENST00000600310 CCNKO75909 580 aa14.71□□□□□ -0.05
UPF1-209ENST00000600310 RLN2P04090 185 aa14.71□□□□□ -0.05
UPF1-209ENST00000600310 OR10J1P30954 320 aa14.71□□□□□ -0.05
UPF1-209ENST00000600310 BCAP31P51572 246 aa14.71□□□□□ -0.05
UPF1-209ENST00000600310 TIGITQ495A1 244 aa14.71□□□□□ -0.05
UPF1-209ENST00000600310 LRRC37A5PQ49AS3 106 aa14.71□□□□□ -0.05
UPF1-209ENST00000600310 OR10P1Q8NGE3 313 aa14.71□□□□□ -0.05
UPF1-209ENST00000600310 FAM24AA6NFZ4 105 aa14.7□□□□□ -0.06
UPF1-209ENST00000600310 K7EMT4 169 aa14.7□□□□□ -0.06
UPF1-209ENST00000600310 CAV2P51636 162 aa14.7□□□□□ -0.06
UPF1-209ENST00000600310 RRAS2P62070 204 aaPredicted RBP14.7□□□□□ -0.06
UPF1-209ENST00000600310 EGFEM1PQ0D2K5 195 aa14.7□□□□□ -0.06
UPF1-209ENST00000600310 TM4SF20Q53R12 229 aa14.7□□□□□ -0.06
UPF1-209ENST00000600310 OR8G2PQ6IF36 304 aa14.7□□□□□ -0.06
UPF1-209ENST00000600310 ADAMTSL5Q6ZMM2 481 aa14.7□□□□□ -0.06
UPF1-209ENST00000600310 ACOT7LQ6ZUV0 252 aa14.7□□□□□ -0.06
UPF1-209ENST00000600310 LYRM2Q9NU23 88 aaPredicted RBP14.7□□□□□ -0.06
UPF1-209ENST00000600310 H0YIZ8 118 aa14.69□□□□□ -0.06
UPF1-209ENST00000600310 YIF1AO95070 293 aa14.69□□□□□ -0.06
UPF1-209ENST00000600310 FOLR2P14207 255 aa14.69□□□□□ -0.06
UPF1-209ENST00000600310 CBLN1P23435 193 aa14.69□□□□□ -0.06
UPF1-209ENST00000600310 YPEL3P61236 119 aaPredicted RBP14.69□□□□□ -0.06
UPF1-209ENST00000600310 DLK1P80370 383 aa14.69□□□□□ -0.06
UPF1-209ENST00000600310 TOMM20LQ6UXN7 152 aa14.69□□□□□ -0.06
UPF1-209ENST00000600310 HAPLN4Q86UW8 402 aa14.69□□□□□ -0.06
UPF1-209ENST00000600310 MARC2Q969Z3 335 aa14.69□□□□□ -0.06
UPF1-209ENST00000600310 C20orf24Q9BUV8 137 aa14.69□□□□□ -0.06
UPF1-209ENST00000600310 DAZ1Q9NQZ3 744 aaKnown RBP14.69□□□□□ -0.06
UPF1-209ENST00000600310 PUS1Q9Y606 427 aaKnown RBP eCLIP14.69□□□□□ -0.06
UPF1-209ENST00000600310 E5RGE8 158 aa14.68□□□□□ -0.06
UPF1-209ENST00000600310 SCAF4O95104 1147 aaKnown RBP14.68□□□□□ -0.06
UPF1-209ENST00000600310 MPC2O95563 127 aa14.68□□□□□ -0.06
UPF1-209ENST00000600310 IGLV1-51P01701 117 aa14.68□□□□□ -0.06
UPF1-209ENST00000600310 C8orf88P0DMB2 117 aa14.68□□□□□ -0.06
UPF1-209ENST00000600310 EDN2P20800 178 aa14.68□□□□□ -0.06
UPF1-209ENST00000600310 ARL16Q0P5N6 197 aa14.68□□□□□ -0.06
UPF1-209ENST00000600310 TMEM252Q8N6L7 170 aa14.68□□□□□ -0.06
UPF1-209ENST00000600310 THAP8Q8NA92 274 aa14.68□□□□□ -0.06
UPF1-209ENST00000600310 RNF126Q9BV68 326 aa14.68□□□□□ -0.06
UPF1-209ENST00000600310 OR5AC2Q9NZP5 309 aa14.68□□□□□ -0.06
UPF1-209ENST00000600310 MRPL27Q9P0M9 148 aaKnown RBP14.68□□□□□ -0.06
UPF1-209ENST00000600310 IGKV1D-37A0A075B6S9 117 aa14.67□□□□□ -0.06
UPF1-209ENST00000600310 IGHV3OR16-8A0A075B7F1 116 aa14.67□□□□□ -0.06
UPF1-209ENST00000600310 ZFP92A6NM28 416 aa14.67□□□□□ -0.06
UPF1-209ENST00000600310 FNDC10F2Z333 226 aa14.67□□□□□ -0.06
UPF1-209ENST00000600310 PET100P0DJ07 73 aa14.67□□□□□ -0.06
UPF1-209ENST00000600310 P2RY1P47900 373 aa14.67□□□□□ -0.06
UPF1-209ENST00000600310 TMEM144Q7Z5S9 345 aa14.67□□□□□ -0.06
UPF1-209ENST00000600310 Q8WTZ3 238 aa14.67□□□□□ -0.06
UPF1-209ENST00000600310 TRGV9Q99603 122 aa14.67□□□□□ -0.06
UPF1-209ENST00000600310 GGACTQ9BVM4 153 aa14.67□□□□□ -0.06
UPF1-209ENST00000600310 ZFAND3Q9H8U3 227 aa14.67□□□□□ -0.06
UPF1-209ENST00000600310 ZMAT5Q9UDW3 170 aaKnown RBP14.67□□□□□ -0.06
UPF1-209ENST00000600310 IGSF23A1L1A6 192 aa14.66□□□□□ -0.06
UPF1-209ENST00000600310 TOMM40O96008 361 aa14.66□□□□□ -0.06
UPF1-209ENST00000600310 KRTAP10-11P60412 298 aa14.66□□□□□ -0.06
UPF1-209ENST00000600310 AKR1C1Q04828 323 aa14.66□□□□□ -0.06
UPF1-209ENST00000600310 ASB13Q8WXK3 278 aa14.66□□□□□ -0.06
UPF1-209ENST00000600310 GINS3Q9BRX5 216 aa14.66□□□□□ -0.06
UPF1-209ENST00000600310 IGKV1OR2-108A0A075B7D4 117 aa14.65□□□□□ -0.06
UPF1-209ENST00000600310 ZNF207O43670 478 aaKnown RBP14.65□□□□□ -0.06
UPF1-209ENST00000600310 CST7O76096 145 aa14.65□□□□□ -0.06
UPF1-209ENST00000600310 GIPP09681 153 aaPredicted RBP14.65□□□□□ -0.06
UPF1-209ENST00000600310 RD3LP0DJH9 198 aa14.65□□□□□ -0.06
UPF1-209ENST00000600310 SULT1A1P50225 295 aa14.65□□□□□ -0.06
UPF1-209ENST00000600310 DEFB114Q30KQ6 69 aa14.65□□□□□ -0.06
UPF1-209ENST00000600310 DYNLRB2Q8TF09 96 aa14.65□□□□□ -0.06
UPF1-209ENST00000600310 TECRQ9NZ01 308 aaKnown RBP14.65□□□□□ -0.06
UPF1-209ENST00000600310 CMYA5Q8N3K9 4069 aa14.65□□□□□ -0.06
UPF1-209ENST00000600310 TRAV14DV4A0A0A6YYC5 116 aa14.64□□□□□ -0.07
UPF1-209ENST00000600310 FABP1P07148 127 aa14.64□□□□□ -0.07
UPF1-209ENST00000600310 PSG1P11464 419 aa14.64□□□□□ -0.07
UPF1-209ENST00000600310 ZNF90Q03938 601 aa14.64□□□□□ -0.07
UPF1-209ENST00000600310 SLC38A11Q08AI6 406 aa14.64□□□□□ -0.07
UPF1-209ENST00000600310 STX12Q86Y82 276 aa14.64□□□□□ -0.07
UPF1-209ENST00000600310 TMEM217Q8N7C4 229 aa14.64□□□□□ -0.07
UPF1-209ENST00000600310 OR2K2Q8NGT1 345 aa14.64□□□□□ -0.07
UPF1-209ENST00000600310 SLC25A31Q9H0C2 315 aa14.64□□□□□ -0.07
UPF1-209ENST00000600310 NPVFQ9HCQ7 196 aa14.64□□□□□ -0.07
UPF1-209ENST00000600310 SMCO3A2RU48 225 aa14.63□□□□□ -0.07
UPF1-209ENST00000600310 LYL1P12980 280 aa14.63□□□□□ -0.07
UPF1-209ENST00000600310 S100A11P31949 105 aa14.63□□□□□ -0.07
UPF1-209ENST00000600310 MBD2Q9UBB5 411 aa14.63□□□□□ -0.07
UPF1-209ENST00000600310 MLXQ9UH92 298 aa14.63□□□□□ -0.07
UPF1-209ENST00000600310 SMPXQ9UHP9 88 aa14.63□□□□□ -0.07
UPF1-209ENST00000600310 IGHV7-4-1A0A0J9YVY3 117 aa14.62□□□□□ -0.07
UPF1-209ENST00000600310 RAP2BP61225 183 aa14.62□□□□□ -0.07
UPF1-209ENST00000600310 HBG1P69891 147 aa14.62□□□□□ -0.07
UPF1-209ENST00000600310 HBG2P69892 147 aa14.62□□□□□ -0.07
UPF1-209ENST00000600310 EWSR1Q01844 656 aaKnown RBP eCLIP14.62□□□□□ -0.07
UPF1-209ENST00000600310 CD300EQ496F6 205 aaPredicted RBP14.62□□□□□ -0.07
UPF1-209ENST00000600310 OR51G1Q8NGK1 321 aa14.62□□□□□ -0.07
UPF1-209ENST00000600310 NPPCP23582 126 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms