RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 CNIH1O95406 144 aa9.34□□□□□ -0.91
ARHGEF1-220ENST00000600274 IGHV1-8P0DP01 117 aa9.34□□□□□ -0.91
ARHGEF1-220ENST00000600274 RNASE2P10153 161 aaKnown RBP9.34□□□□□ -0.91
ARHGEF1-220ENST00000600274 VMA21Q3ZAQ7 101 aa9.34□□□□□ -0.91
ARHGEF1-220ENST00000600274 LEMD1Q68G75 181 aa9.34□□□□□ -0.91
ARHGEF1-220ENST00000600274 OR1B1Q8NGR6 318 aa9.34□□□□□ -0.91
ARHGEF1-220ENST00000600274 RPEQ96AT9 228 aa9.34□□□□□ -0.91
ARHGEF1-220ENST00000600274 NOL4LQ96MY1 436 aaPredicted RBP9.34□□□□□ -0.91
ARHGEF1-220ENST00000600274 KCNIP2Q9NS61 270 aa9.34□□□□□ -0.91
ARHGEF1-220ENST00000600274 PPIAL4CA0A0B4J2A2 164 aa9.33□□□□□ -0.92
ARHGEF1-220ENST00000600274 FAM90A9PA6NNJ1 464 aa9.33□□□□□ -0.92
ARHGEF1-220ENST00000600274 SNURFLB1AK76 121 aa9.33□□□□□ -0.92
ARHGEF1-220ENST00000600274 PPIAL4GP0DN37 164 aa9.33□□□□□ -0.92
ARHGEF1-220ENST00000600274 MEF2CQ06413 473 aaPredicted RBP9.33□□□□□ -0.92
ARHGEF1-220ENST00000600274 C3orf36Q3SXR2 165 aa9.33□□□□□ -0.92
ARHGEF1-220ENST00000600274 LINC00479Q96M42 142 aa9.33□□□□□ -0.92
ARHGEF1-220ENST00000600274 TMEM208Q9BTX3 173 aa9.33□□□□□ -0.92
ARHGEF1-220ENST00000600274 GCGP01275 180 aa9.33□□□□□ -0.92
ARHGEF1-220ENST00000600274 AREGP15514 252 aa9.33□□□□□ -0.92
ARHGEF1-220ENST00000600274 AMTP48728 403 aa9.33□□□□□ -0.92
ARHGEF1-220ENST00000600274 HLA-DRB5Q30154 266 aa9.33□□□□□ -0.92
ARHGEF1-220ENST00000600274 PQLC2Q6ZP29 291 aa9.33□□□□□ -0.92
ARHGEF1-220ENST00000600274 SIGLECL1Q8N7X8 197 aa9.33□□□□□ -0.92
ARHGEF1-220ENST00000600274 OR5AU1Q8NGC0 362 aa9.33□□□□□ -0.92
ARHGEF1-220ENST00000600274 OR10G8Q8NGN5 311 aa9.33□□□□□ -0.92
ARHGEF1-220ENST00000600274 OSR1Q8TAX0 266 aaPredicted RBP9.33□□□□□ -0.92
ARHGEF1-220ENST00000600274 KLRD1Q13241 179 aa9.33□□□□□ -0.92
ARHGEF1-220ENST00000600274 ZNF833PQ6ZTB9 187 aa9.33□□□□□ -0.92
ARHGEF1-220ENST00000600274 C11orf42Q8N5U0 333 aa9.33□□□□□ -0.92
ARHGEF1-220ENST00000600274 OR5B3Q8NH48 314 aa9.33□□□□□ -0.92
ARHGEF1-220ENST00000600274 MRPL36Q9P0J6 103 aaKnown RBP9.33□□□□□ -0.92
ARHGEF1-220ENST00000600274 LSM4Q9Y4Z0 139 aaKnown RBP9.33□□□□□ -0.92
ARHGEF1-220ENST00000600274 B9A039 149 aa9.32□□□□□ -0.92
ARHGEF1-220ENST00000600274 PPOXP50336 477 aa9.32□□□□□ -0.92
ARHGEF1-220ENST00000600274 CORO2AQ92828 525 aa9.32□□□□□ -0.92
ARHGEF1-220ENST00000600274 SFRP2Q96HF1 295 aa9.32□□□□□ -0.92
ARHGEF1-220ENST00000600274 TMEM133Q9H2Q1 129 aa9.32□□□□□ -0.92
ARHGEF1-220ENST00000600274 USF1P22415 310 aaPredicted RBP9.32□□□□□ -0.92
ARHGEF1-220ENST00000600274 ADMP35318 185 aa9.32□□□□□ -0.92
ARHGEF1-220ENST00000600274 RANP62826 216 aaKnown RBP9.32□□□□□ -0.92
ARHGEF1-220ENST00000600274 CD69Q07108 199 aa9.32□□□□□ -0.92
ARHGEF1-220ENST00000600274 ZNF672Q499Z4 452 aaPredicted RBP9.32□□□□□ -0.92
ARHGEF1-220ENST00000600274 TMEM144Q7Z5S9 345 aa9.32□□□□□ -0.92
ARHGEF1-220ENST00000600274 OR8I2Q8N0Y5 310 aa9.32□□□□□ -0.92
ARHGEF1-220ENST00000600274 WNT10AQ9GZT5 417 aa9.32□□□□□ -0.92
ARHGEF1-220ENST00000600274 RNASE7Q9H1E1 156 aaKnown RBP9.32□□□□□ -0.92
ARHGEF1-220ENST00000600274 FNDC4Q9H6D8 234 aaPredicted RBP9.32□□□□□ -0.92
ARHGEF1-220ENST00000600274 HRNRQ86YZ3 2850 aaPredicted RBP9.31□□□□□ -0.92
ARHGEF1-220ENST00000600274 PRSS47A8MTI9 375 aa9.31□□□□□ -0.92
ARHGEF1-220ENST00000600274 CDKN1AP38936 164 aa9.31□□□□□ -0.92
ARHGEF1-220ENST00000600274 GNG4P50150 75 aa9.31□□□□□ -0.92
ARHGEF1-220ENST00000600274 OR1L6Q8NGR2 347 aa9.31□□□□□ -0.92
ARHGEF1-220ENST00000600274 OR5R1Q8NH85 324 aa9.31□□□□□ -0.92
ARHGEF1-220ENST00000600274 ANAPC16Q96DE5 110 aa9.31□□□□□ -0.92
ARHGEF1-220ENST00000600274 LPAR2Q9HBW0 351 aa9.31□□□□□ -0.92
ARHGEF1-220ENST00000600274 BET1LQ9NYM9 111 aa9.31□□□□□ -0.92
ARHGEF1-220ENST00000600274 TECRQ9NZ01 308 aaKnown RBP9.31□□□□□ -0.92
ARHGEF1-220ENST00000600274 SLC45A2Q9UMX9 530 aa9.31□□□□□ -0.92
ARHGEF1-220ENST00000600274 IGHV2-26A0A0B4J1V2 119 aa9.31□□□□□ -0.92
ARHGEF1-220ENST00000600274 A0A1W2PPI3 338 aa9.31□□□□□ -0.92
ARHGEF1-220ENST00000600274 HELTA6NFD8 242 aa9.31□□□□□ -0.92
ARHGEF1-220ENST00000600274 DLL1O00548 723 aa9.31□□□□□ -0.92
ARHGEF1-220ENST00000600274 NDUFS7O75251 213 aa9.31□□□□□ -0.92
ARHGEF1-220ENST00000600274 CA1P00915 261 aaPredicted RBP9.31□□□□□ -0.92
ARHGEF1-220ENST00000600274 PTTG1IPP53801 180 aa9.31□□□□□ -0.92
ARHGEF1-220ENST00000600274 TPPP2P59282 170 aa9.31□□□□□ -0.92
ARHGEF1-220ENST00000600274 CENPWQ5EE01 88 aa9.31□□□□□ -0.92
ARHGEF1-220ENST00000600274 FAM19A2Q8N3H0 131 aa9.31□□□□□ -0.92
ARHGEF1-220ENST00000600274 TMEM186Q96B77 213 aa9.31□□□□□ -0.92
ARHGEF1-220ENST00000600274 SERF1AO75920 110 aa9.31□□□□□ -0.92
ARHGEF1-220ENST00000600274 MMDQ15546 238 aa9.31□□□□□ -0.92
ARHGEF1-220ENST00000600274 TMEM155Q4W5P6 130 aa9.31□□□□□ -0.92
ARHGEF1-220ENST00000600274 OR5AN1Q8NGI8 311 aa9.31□□□□□ -0.92
ARHGEF1-220ENST00000600274 SLC25A33Q9BSK2 321 aa9.31□□□□□ -0.92
ARHGEF1-220ENST00000600274 ZNF355PQ9NSJ1 428 aa9.31□□□□□ -0.92
ARHGEF1-220ENST00000600274 ZNF835Q9Y2P0 537 aa9.31□□□□□ -0.92
ARHGEF1-220ENST00000600274 POLQO75417 2590 aa9.31□□□□□ -0.92
ARHGEF1-220ENST00000600274 ITGB1BP1O14713 200 aa9.3□□□□□ -0.92
ARHGEF1-220ENST00000600274 FRMD6-AS1P0C7T7 363 aa9.3□□□□□ -0.92
ARHGEF1-220ENST00000600274 RPL27AP46776 148 aaKnown RBP9.3□□□□□ -0.92
ARHGEF1-220ENST00000600274 RUSC1-AS1Q66K80 236 aa9.3□□□□□ -0.92
ARHGEF1-220ENST00000600274 VSTM2AQ8TAG5 236 aa9.3□□□□□ -0.92
ARHGEF1-220ENST00000600274 SSBP3Q9BWW4 388 aaPredicted RBP9.3□□□□□ -0.92
ARHGEF1-220ENST00000600274 ZNF253O75346 499 aa9.3□□□□□ -0.92
ARHGEF1-220ENST00000600274 RBP4P02753 201 aa9.3□□□□□ -0.92
ARHGEF1-220ENST00000600274 MAS1LP35410 378 aa9.3□□□□□ -0.92
ARHGEF1-220ENST00000600274 SUB1P53999 127 aaKnown RBP eCLIP9.3□□□□□ -0.92
ARHGEF1-220ENST00000600274 C2orf88Q9BSF0 95 aa9.3□□□□□ -0.92
ARHGEF1-220ENST00000600274 MRPL18Q9H0U6 180 aaKnown RBP9.3□□□□□ -0.92
ARHGEF1-220ENST00000600274 DNAJC4Q9NNZ3 241 aa9.3□□□□□ -0.92
ARHGEF1-220ENST00000600274 NDUFA4L2Q9NRX3 87 aa9.3□□□□□ -0.92
ARHGEF1-220ENST00000600274 F2Z2F3 143 aa9.3□□□□□ -0.92
ARHGEF1-220ENST00000600274 TAS2R45P59539 299 aa9.3□□□□□ -0.92
ARHGEF1-220ENST00000600274 GNG5P63218 68 aa9.3□□□□□ -0.92
ARHGEF1-220ENST00000600274 KLF17Q5JT82 389 aaPredicted RBP9.3□□□□□ -0.92
ARHGEF1-220ENST00000600274 JKAMPQ9P055 326 aa9.3□□□□□ -0.92
ARHGEF1-220ENST00000600274 ZNF257Q9Y2Q1 563 aa9.3□□□□□ -0.92
ARHGEF1-220ENST00000600274 POLR3KQ9Y2Y1 108 aaPredicted RBP9.3□□□□□ -0.92
ARHGEF1-220ENST00000600274 MSRB2Q9Y3D2 182 aa9.3□□□□□ -0.92
ARHGEF1-220ENST00000600274 RPLP1P05386 114 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 163.6 ms