RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 INS-IGF2F8WCM5 200 aa13.91□□□□□ -0.18
PNKP-213ENST00000599543 PITX3O75364 302 aa13.91□□□□□ -0.18
PNKP-213ENST00000599543 DEFB135Q30KP9 77 aa13.91□□□□□ -0.18
PNKP-213ENST00000599543 ODF3L2Q3SX64 289 aa13.91□□□□□ -0.18
PNKP-213ENST00000599543 Q6ZWC4 215 aa13.91□□□□□ -0.18
PNKP-213ENST00000599543 DTD1Q8TEA8 209 aa13.91□□□□□ -0.18
PNKP-213ENST00000599543 TMEM170AQ8WVE7 144 aa13.91□□□□□ -0.18
PNKP-213ENST00000599543 TP53TG1Q9Y2A0 90 aa13.91□□□□□ -0.18
PNKP-213ENST00000599543 YIF1AO95070 293 aa13.9□□□□□ -0.18
PNKP-213ENST00000599543 CTSGP08311 255 aa13.9□□□□□ -0.18
PNKP-213ENST00000599543 BMI1P35226 326 aa13.9□□□□□ -0.18
PNKP-213ENST00000599543 MITD1Q8WV92 249 aa13.9□□□□□ -0.18
PNKP-213ENST00000599543 FNDC4Q9H6D8 234 aaPredicted RBP13.9□□□□□ -0.18
PNKP-213ENST00000599543 MRPL36Q9P0J6 103 aaKnown RBP13.9□□□□□ -0.18
PNKP-213ENST00000599543 ALMS1Q8TCU4 4167 aa13.9□□□□□ -0.18
PNKP-213ENST00000599543 A0A0J9YWU9 116 aa13.89□□□□□ -0.19
PNKP-213ENST00000599543 UBE2CO00762 179 aa13.89□□□□□ -0.19
PNKP-213ENST00000599543 SPRY2O43597 315 aa13.89□□□□□ -0.19
PNKP-213ENST00000599543 IFNA10P01566 189 aa13.89□□□□□ -0.19
PNKP-213ENST00000599543 SUB1P53999 127 aaKnown RBP eCLIP13.89□□□□□ -0.19
PNKP-213ENST00000599543 MFAP4P55083 255 aa13.89□□□□□ -0.19
PNKP-213ENST00000599543 BSXQ3C1V8 233 aa13.89□□□□□ -0.19
PNKP-213ENST00000599543 WFDC3Q8IUB2 231 aa13.89□□□□□ -0.19
PNKP-213ENST00000599543 STPG3Q8N7X2 389 aa13.89□□□□□ -0.19
PNKP-213ENST00000599543 SLC24A4Q8NFF2 622 aa13.89□□□□□ -0.19
PNKP-213ENST00000599543 ZNF431Q8TF32 576 aaPredicted RBP13.89□□□□□ -0.19
PNKP-213ENST00000599543 OR10C1Q96KK4 312 aa13.89□□□□□ -0.19
PNKP-213ENST00000599543 TXN2Q99757 166 aa13.89□□□□□ -0.19
PNKP-213ENST00000599543 KIR2DL5BA0A0G2JN68 375 aa13.88□□□□□ -0.19
PNKP-213ENST00000599543 KIR2DL5BA0A0G2JPC4 375 aa13.88□□□□□ -0.19
PNKP-213ENST00000599543 IGHV7-4-1A0A0J9YVY3 117 aa13.88□□□□□ -0.19
PNKP-213ENST00000599543 CXorf65A6NEN9 183 aa13.88□□□□□ -0.19
PNKP-213ENST00000599543 IFNA21P01568 189 aa13.88□□□□□ -0.19
PNKP-213ENST00000599543 NPY1RP25929 384 aa13.88□□□□□ -0.19
PNKP-213ENST00000599543 FCGR2BP31994 310 aaPredicted RBP13.88□□□□□ -0.19
PNKP-213ENST00000599543 OPRK1P41145 380 aa13.88□□□□□ -0.19
PNKP-213ENST00000599543 HTR2BP41595 481 aa13.88□□□□□ -0.19
PNKP-213ENST00000599543 PMS2P11Q13670 270 aa13.88□□□□□ -0.19
PNKP-213ENST00000599543 KIR2DL5AQ8N109 375 aa13.88□□□□□ -0.19
PNKP-213ENST00000599543 TMEM116Q8NCL8 245 aa13.88□□□□□ -0.19
PNKP-213ENST00000599543 KIR2DL5BQ8NHK3 375 aa13.88□□□□□ -0.19
PNKP-213ENST00000599543 RNF2Q99496 336 aa13.88□□□□□ -0.19
PNKP-213ENST00000599543 RHPN1-AS1Q9BWJ2 59 aa13.88□□□□□ -0.19
PNKP-213ENST00000599543 SMPXQ9UHP9 88 aa13.88□□□□□ -0.19
PNKP-213ENST00000599543 PAIP2BQ9ULR5 123 aaKnown RBP13.88□□□□□ -0.19
PNKP-213ENST00000599543 PLECQ15149 4684 aaKnown RBP13.87□□□□□ -0.19
PNKP-213ENST00000599543 FAM25EA8MYX2 175 aa13.87□□□□□ -0.19
PNKP-213ENST00000599543 WRBO00258 174 aa13.87□□□□□ -0.19
PNKP-213ENST00000599543 GNG7O60262 68 aa13.87□□□□□ -0.19
PNKP-213ENST00000599543 SCGB1D2O95969 90 aa13.87□□□□□ -0.19
PNKP-213ENST00000599543 SLC25A6P12236 298 aa13.87□□□□□ -0.19
PNKP-213ENST00000599543 RPL35AP18077 110 aaKnown RBP13.87□□□□□ -0.19
PNKP-213ENST00000599543 DEFA1P59665 94 aa13.87□□□□□ -0.19
PNKP-213ENST00000599543 DEFA3P59666 94 aa13.87□□□□□ -0.19
PNKP-213ENST00000599543 IAH1Q2TAA2 248 aaPredicted RBP13.87□□□□□ -0.19
PNKP-213ENST00000599543 C2orf83Q53S99 150 aa13.87□□□□□ -0.19
PNKP-213ENST00000599543 PVRIGQ6DKI7 326 aa13.87□□□□□ -0.19
PNKP-213ENST00000599543 C12orf45Q8N5I9 185 aaPredicted RBP13.87□□□□□ -0.19
PNKP-213ENST00000599543 ZNF414Q96IQ9 312 aa13.87□□□□□ -0.19
PNKP-213ENST00000599543 GSKIPQ9P0R6 139 aa13.87□□□□□ -0.19
PNKP-213ENST00000599543 IGHV3-49A0A0A0MS15 119 aa13.86□□□□□ -0.19
PNKP-213ENST00000599543 PIGBOS1A0A0B4J2F0 54 aa13.86□□□□□ -0.19
PNKP-213ENST00000599543 CHEK1O14757 476 aa13.86□□□□□ -0.19
PNKP-213ENST00000599543 POLR2GP62487 172 aaKnown RBP eCLIP13.86□□□□□ -0.19
PNKP-213ENST00000599543 DUSP18Q8NEJ0 188 aa13.86□□□□□ -0.19
PNKP-213ENST00000599543 TRAV14DV4A0A0A6YYC5 116 aa13.85□□□□□ -0.19
PNKP-213ENST00000599543 NUPR2A6NF83 97 aa13.85□□□□□ -0.19
PNKP-213ENST00000599543 INMT-MINDY4F8WBC2 141 aa13.85□□□□□ -0.19
PNKP-213ENST00000599543 H3BP45 60 aa13.85□□□□□ -0.19
PNKP-213ENST00000599543 TFPI2P48307 235 aa13.85□□□□□ -0.19
PNKP-213ENST00000599543 APRG1Q8IVJ8 170 aa13.85□□□□□ -0.19
PNKP-213ENST00000599543 ZBTB8BQ8NAP8 495 aaPredicted RBP13.85□□□□□ -0.19
PNKP-213ENST00000599543 OR4D5Q8NGN0 318 aa13.85□□□□□ -0.19
PNKP-213ENST00000599543 RNF183Q96D59 192 aa13.85□□□□□ -0.19
PNKP-213ENST00000599543 GINS3Q9BRX5 216 aa13.85□□□□□ -0.19
PNKP-213ENST00000599543 IGKV3-7A0A075B6H7 116 aa13.84□□□□□ -0.19
PNKP-213ENST00000599543 SYNGR2O43760 224 aa13.84□□□□□ -0.19
PNKP-213ENST00000599543 CMC4P56277 68 aaPredicted RBP13.84□□□□□ -0.19
PNKP-213ENST00000599543 MAP6D1Q9H9H5 199 aa13.84□□□□□ -0.19
PNKP-213ENST00000599543 BIRC6Q9NR09 4857 aa13.83□□□□□ -0.2
PNKP-213ENST00000599543 IGHV3OR16-13A0A075B7E8 117 aa13.83□□□□□ -0.2
PNKP-213ENST00000599543 IGHV3-74A0A0B4J1X5 117 aa13.83□□□□□ -0.2
PNKP-213ENST00000599543 C5orf51A6NDU8 294 aa13.83□□□□□ -0.2
PNKP-213ENST00000599543 CORTO00230 105 aa13.83□□□□□ -0.2
PNKP-213ENST00000599543 SSSCA1O60232 199 aa13.83□□□□□ -0.2
PNKP-213ENST00000599543 IFNA4P05014 189 aa13.83□□□□□ -0.2
PNKP-213ENST00000599543 IL5P05113 134 aa13.83□□□□□ -0.2
PNKP-213ENST00000599543 NKX2-1P43699 371 aaPredicted RBP13.83□□□□□ -0.2
PNKP-213ENST00000599543 NPBWR1P48145 328 aa13.83□□□□□ -0.2
PNKP-213ENST00000599543 RND2P52198 227 aa13.83□□□□□ -0.2
PNKP-213ENST00000599543 EWSR1Q01844 656 aaKnown RBP eCLIP13.83□□□□□ -0.2
PNKP-213ENST00000599543 TMEM217Q8N7C4 229 aa13.83□□□□□ -0.2
PNKP-213ENST00000599543 LINC00476Q8WZB0 136 aa13.83□□□□□ -0.2
PNKP-213ENST00000599543 ACY3Q96HD9 319 aa13.83□□□□□ -0.2
PNKP-213ENST00000599543 CACFD1Q9UGQ2 172 aa13.83□□□□□ -0.2
PNKP-213ENST00000599543 FAM90A26D6RGX4 464 aa13.82□□□□□ -0.2
PNKP-213ENST00000599543 MED6O75586 246 aa13.82□□□□□ -0.2
PNKP-213ENST00000599543 SIX6O95475 246 aa13.82□□□□□ -0.2
PNKP-213ENST00000599543 TMEM50AO95807 157 aa13.82□□□□□ -0.2
PNKP-213ENST00000599543 CD5P06127 495 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms