RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 AP3S2P59780 193 aa8.96□□□□□ -0.98
LIG1-217ENST00000599165 EWSR1Q01844 656 aaKnown RBP eCLIP8.96□□□□□ -0.98
LIG1-217ENST00000599165 RBMS2Q15434 407 aaKnown RBP8.96□□□□□ -0.98
LIG1-217ENST00000599165 GBGT1Q8N5D6 347 aa8.96□□□□□ -0.98
LIG1-217ENST00000599165 SLC25A21Q9BQT8 299 aaPredicted RBP8.96□□□□□ -0.98
LIG1-217ENST00000599165 GINS3Q9BRX5 216 aa8.96□□□□□ -0.98
LIG1-217ENST00000599165 ALMS1Q8TCU4 4167 aa8.95□□□□□ -0.98
LIG1-217ENST00000599165 SRPXP78539 464 aa8.95□□□□□ -0.98
LIG1-217ENST00000599165 USF2Q15853 346 aaPredicted RBP8.95□□□□□ -0.98
LIG1-217ENST00000599165 DTD1Q8TEA8 209 aa8.95□□□□□ -0.98
LIG1-217ENST00000599165 MS4A6AQ9H2W1 248 aa8.95□□□□□ -0.98
LIG1-217ENST00000599165 FLVCR2Q9UPI3 526 aa8.95□□□□□ -0.98
LIG1-217ENST00000599165 IGKV1D-37A0A075B6S9 117 aa8.94□□□□□ -0.98
LIG1-217ENST00000599165 DUXBA0A1W2PPF3 345 aa8.94□□□□□ -0.98
LIG1-217ENST00000599165 RPS10-NUDT3A0A1W2PQS6 291 aa8.94□□□□□ -0.98
LIG1-217ENST00000599165 NDUFB6O95139 128 aa8.94□□□□□ -0.98
LIG1-217ENST00000599165 SLC25A4P12235 298 aa8.94□□□□□ -0.98
LIG1-217ENST00000599165 ANXA3P12429 323 aa8.94□□□□□ -0.98
LIG1-217ENST00000599165 RPL35AP18077 110 aaKnown RBP8.94□□□□□ -0.98
LIG1-217ENST00000599165 VAMP1P23763 118 aa8.94□□□□□ -0.98
LIG1-217ENST00000599165 OR10J1P30954 320 aa8.94□□□□□ -0.98
LIG1-217ENST00000599165 YPEL3P61236 119 aaPredicted RBP8.94□□□□□ -0.98
LIG1-217ENST00000599165 DEFB135Q30KP9 77 aa8.94□□□□□ -0.98
LIG1-217ENST00000599165 SPANXN2Q5MJ10 180 aa8.94□□□□□ -0.98
LIG1-217ENST00000599165 WFDC3Q8IUB2 231 aa8.94□□□□□ -0.98
LIG1-217ENST00000599165 OR1S2Q8NGQ3 325 aa8.94□□□□□ -0.98
LIG1-217ENST00000599165 NPIPB3Q92617 1050 aa8.94□□□□□ -0.98
LIG1-217ENST00000599165 TRAV30A0A087WSZ9 112 aa8.93□□□□□ -0.98
LIG1-217ENST00000599165 TRAV2A0A0B4J234 112 aa8.93□□□□□ -0.98
LIG1-217ENST00000599165 KIR2DL5BA0A0G2JN68 375 aa8.93□□□□□ -0.98
LIG1-217ENST00000599165 KIR2DL5BA0A0G2JPC4 375 aa8.93□□□□□ -0.98
LIG1-217ENST00000599165 MPTX1A8MV57 137 aa8.93□□□□□ -0.98
LIG1-217ENST00000599165 PRSS46E5RG02 174 aa8.93□□□□□ -0.98
LIG1-217ENST00000599165 K7EQG2 157 aa8.93□□□□□ -0.98
LIG1-217ENST00000599165 SLC25A6P12236 298 aa8.93□□□□□ -0.98
LIG1-217ENST00000599165 NPPCP23582 126 aa8.93□□□□□ -0.98
LIG1-217ENST00000599165 P2RY1P47900 373 aa8.93□□□□□ -0.98
LIG1-217ENST00000599165 Q6ZWC4 215 aa8.93□□□□□ -0.98
LIG1-217ENST00000599165 KIR2DL5AQ8N109 375 aa8.93□□□□□ -0.98
LIG1-217ENST00000599165 CENPSQ8N2Z9 138 aa8.93□□□□□ -0.98
LIG1-217ENST00000599165 OR1S1Q8NH92 325 aa8.93□□□□□ -0.98
LIG1-217ENST00000599165 KIR2DL5BQ8NHK3 375 aa8.93□□□□□ -0.98
LIG1-217ENST00000599165 DCANP1Q8TF63 244 aa8.93□□□□□ -0.98
LIG1-217ENST00000599165 GLMPQ8WWB7 406 aa8.93□□□□□ -0.98
LIG1-217ENST00000599165 ACY3Q96HD9 319 aa8.93□□□□□ -0.98
LIG1-217ENST00000599165 TP53TG1Q9Y2A0 90 aa8.93□□□□□ -0.98
LIG1-217ENST00000599165 U3KQ87 197 aa8.93□□□□□ -0.98
LIG1-217ENST00000599165 LCE6AA0A183 80 aa8.92□□□□□ -0.98
LIG1-217ENST00000599165 C9orf170A2RU37 121 aa8.92□□□□□ -0.98
LIG1-217ENST00000599165 IFNA10P01566 189 aa8.92□□□□□ -0.98
LIG1-217ENST00000599165 IAPPP10997 89 aa8.92□□□□□ -0.98
LIG1-217ENST00000599165 IL7P13232 177 aa8.92□□□□□ -0.98
LIG1-217ENST00000599165 APOC4P55056 127 aa8.92□□□□□ -0.98
LIG1-217ENST00000599165 GAMTQ14353 236 aa8.92□□□□□ -0.98
LIG1-217ENST00000599165 GGNBP1Q5YKI7 109 aa8.92□□□□□ -0.98
LIG1-217ENST00000599165 STPG3Q8N7X2 389 aa8.92□□□□□ -0.98
LIG1-217ENST00000599165 RNF183Q96D59 192 aa8.92□□□□□ -0.98
LIG1-217ENST00000599165 METTL26Q96S19 204 aa8.92□□□□□ -0.98
LIG1-217ENST00000599165 CACFD1Q9UGQ2 172 aa8.92□□□□□ -0.98
LIG1-217ENST00000599165 TMED3Q9Y3Q3 217 aa8.92□□□□□ -0.98
LIG1-217ENST00000599165 EPPK1P58107 5090 aaKnown RBP8.91□□□□□ -0.98
LIG1-217ENST00000599165 IGKV1OR2-108A0A075B7D4 117 aa8.91□□□□□ -0.98
LIG1-217ENST00000599165 LINC00854A0A1B0GVQ3 168 aa8.91□□□□□ -0.98
LIG1-217ENST00000599165 UBE2CO00762 179 aa8.91□□□□□ -0.98
LIG1-217ENST00000599165 PLA2G10O15496 165 aa8.91□□□□□ -0.98
LIG1-217ENST00000599165 SPRY2O43597 315 aa8.91□□□□□ -0.98
LIG1-217ENST00000599165 ADAP1O75689 374 aa8.91□□□□□ -0.98
LIG1-217ENST00000599165 TOMM40O96008 361 aa8.91□□□□□ -0.98
LIG1-217ENST00000599165 CD5P06127 495 aa8.91□□□□□ -0.98
LIG1-217ENST00000599165 HOXB5P09067 269 aa8.91□□□□□ -0.98
LIG1-217ENST00000599165 GIG44P09565 113 aaPredicted RBP8.91□□□□□ -0.98
LIG1-217ENST00000599165 PSG1P11464 419 aa8.91□□□□□ -0.98
LIG1-217ENST00000599165 DEFB131AP59861 70 aa8.91□□□□□ -0.98
LIG1-217ENST00000599165 UBE2MP61081 183 aaKnown RBP8.91□□□□□ -0.98
LIG1-217ENST00000599165 ZNF90Q03938 601 aa8.91□□□□□ -0.98
LIG1-217ENST00000599165 LEMD1Q68G75 181 aa8.91□□□□□ -0.98
LIG1-217ENST00000599165 C16orf54Q6UWD8 224 aa8.91□□□□□ -0.98
LIG1-217ENST00000599165 MAGT1Q9H0U3 335 aa8.91□□□□□ -0.98
LIG1-217ENST00000599165 A0A0J9YWU9 116 aa8.9□□□□□ -0.98
LIG1-217ENST00000599165 A0A1W2PS18 150 aa8.9□□□□□ -0.98
LIG1-217ENST00000599165 NAP1L6A6NFF2 107 aa8.9□□□□□ -0.98
LIG1-217ENST00000599165 FAM90A26D6RGX4 464 aa8.9□□□□□ -0.98
LIG1-217ENST00000599165 BUB3O43684 328 aa8.9□□□□□ -0.98
LIG1-217ENST00000599165 IL4P05112 153 aa8.9□□□□□ -0.98
LIG1-217ENST00000599165 ANXA7P20073 488 aaKnown RBP8.9□□□□□ -0.98
LIG1-217ENST00000599165 BMI1P35226 326 aa8.9□□□□□ -0.98
LIG1-217ENST00000599165 DHRS2Q13268 280 aa8.9□□□□□ -0.98
LIG1-217ENST00000599165 TRIQKQ629K1 86 aa8.9□□□□□ -0.98
LIG1-217ENST00000599165 ETFRF1Q6IPR1 90 aa8.9□□□□□ -0.98
LIG1-217ENST00000599165 LYG2Q86SG7 212 aa8.9□□□□□ -0.98
LIG1-217ENST00000599165 NOXA1Q86UR1 476 aa8.9□□□□□ -0.98
LIG1-217ENST00000599165 Q8WTZ3 238 aa8.9□□□□□ -0.98
LIG1-217ENST00000599165 SYNGR2O43760 224 aa8.89□□□□□ -0.99
LIG1-217ENST00000599165 IFNA4P05014 189 aa8.89□□□□□ -0.99
LIG1-217ENST00000599165 HNRNPCP07910 306 aaKnown RBP eCLIP8.89□□□□□ -0.99
LIG1-217ENST00000599165 OR4E1P0C645 316 aa8.89□□□□□ -0.99
LIG1-217ENST00000599165 RD3LP0DJH9 198 aa8.89□□□□□ -0.99
LIG1-217ENST00000599165 GPX4P36969 197 aaPredicted RBP8.89□□□□□ -0.99
LIG1-217ENST00000599165 CMC4P56277 68 aaPredicted RBP8.89□□□□□ -0.99
LIG1-217ENST00000599165 ATP5IP56385 69 aaPredicted RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms