RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 MYOZ3Q8TDC0 251 aa10.54□□□□□ -0.72
SHKBP1-218ENST00000598907 DEFA4P12838 97 aa10.53□□□□□ -0.72
SHKBP1-218ENST00000598907 KIAA0141Q14154 515 aaPredicted RBP10.53□□□□□ -0.72
SHKBP1-218ENST00000598907 SLC25A24Q6NUK1 477 aa10.53□□□□□ -0.72
SHKBP1-218ENST00000598907 ZNF491Q8N8L2 437 aa10.53□□□□□ -0.72
SHKBP1-218ENST00000598907 RNASEH2CQ8TDP1 164 aaKnown RBP10.53□□□□□ -0.72
SHKBP1-218ENST00000598907 UBE2E2Q96LR5 201 aa10.53□□□□□ -0.72
SHKBP1-218ENST00000598907 SLA2Q9H6Q3 261 aa10.53□□□□□ -0.72
SHKBP1-218ENST00000598907 TNFSF18Q9UNG2 199 aa10.53□□□□□ -0.72
SHKBP1-218ENST00000598907 HMSDA8MTL9 139 aa10.52□□□□□ -0.73
SHKBP1-218ENST00000598907 I3L2K1 104 aa10.52□□□□□ -0.73
SHKBP1-218ENST00000598907 K7EIM0 57 aa10.52□□□□□ -0.73
SHKBP1-218ENST00000598907 CORTO00230 105 aa10.52□□□□□ -0.73
SHKBP1-218ENST00000598907 NDUFB8O95169 186 aa10.52□□□□□ -0.73
SHKBP1-218ENST00000598907 METTL15P1P0C7V9 234 aa10.52□□□□□ -0.73
SHKBP1-218ENST00000598907 SULT1A1P50225 295 aa10.52□□□□□ -0.73
SHKBP1-218ENST00000598907 RAB9AP51151 201 aa10.52□□□□□ -0.73
SHKBP1-218ENST00000598907 CAV2P51636 162 aa10.52□□□□□ -0.73
SHKBP1-218ENST00000598907 RAB11AP62491 216 aa10.52□□□□□ -0.73
SHKBP1-218ENST00000598907 ARL16Q0P5N6 197 aa10.52□□□□□ -0.73
SHKBP1-218ENST00000598907 ZNF546Q86UE3 836 aa10.52□□□□□ -0.73
SHKBP1-218ENST00000598907 NECAP1Q8NC96 275 aa10.52□□□□□ -0.73
SHKBP1-218ENST00000598907 AQP10Q96PS8 301 aa10.52□□□□□ -0.73
SHKBP1-218ENST00000598907 KRTAP4-5Q9BYR2 181 aa10.52□□□□□ -0.73
SHKBP1-218ENST00000598907 SLC25A31Q9H0C2 315 aa10.52□□□□□ -0.73
SHKBP1-218ENST00000598907 FNDC4Q9H6D8 234 aaPredicted RBP10.52□□□□□ -0.73
SHKBP1-218ENST00000598907 FXYD6-FXYD2A0A087WZ82 144 aa10.51□□□□□ -0.73
SHKBP1-218ENST00000598907 RNF222A6NCQ9 220 aa10.51□□□□□ -0.73
SHKBP1-218ENST00000598907 FAM223BA6NKX1 122 aa10.51□□□□□ -0.73
SHKBP1-218ENST00000598907 LINC01619G3V211 115 aa10.51□□□□□ -0.73
SHKBP1-218ENST00000598907 CYB5BO43169 146 aa10.51□□□□□ -0.73
SHKBP1-218ENST00000598907 OR2J3O76001 311 aa10.51□□□□□ -0.73
SHKBP1-218ENST00000598907 SCAF4O95104 1147 aaKnown RBP10.51□□□□□ -0.73
SHKBP1-218ENST00000598907 RPL12P30050 165 aaKnown RBP10.51□□□□□ -0.73
SHKBP1-218ENST00000598907 RHOGP84095 191 aa10.51□□□□□ -0.73
SHKBP1-218ENST00000598907 RUNX1Q01196 453 aa10.51□□□□□ -0.73
SHKBP1-218ENST00000598907 EWSR1Q01844 656 aaKnown RBP eCLIP10.51□□□□□ -0.73
SHKBP1-218ENST00000598907 NHLH2Q02577 135 aa10.51□□□□□ -0.73
SHKBP1-218ENST00000598907 EXOSC2Q13868 293 aaKnown RBP10.51□□□□□ -0.73
SHKBP1-218ENST00000598907 FAM223AQ8IWN6 122 aa10.51□□□□□ -0.73
SHKBP1-218ENST00000598907 MS4A10Q96PG2 267 aa10.51□□□□□ -0.73
SHKBP1-218ENST00000598907 ZNF355PQ9NSJ1 428 aa10.51□□□□□ -0.73
SHKBP1-218ENST00000598907 THYN1Q9P016 225 aa10.51□□□□□ -0.73
SHKBP1-218ENST00000598907 FBXL7Q9UJT9 491 aa10.51□□□□□ -0.73
SHKBP1-218ENST00000598907 IGHV4OR15-8A0A075B7B6 117 aa10.5□□□□□ -0.73
SHKBP1-218ENST00000598907 A0A087WW49 117 aa10.5□□□□□ -0.73
SHKBP1-218ENST00000598907 PFDN1O60925 122 aa10.5□□□□□ -0.73
SHKBP1-218ENST00000598907 CST7O76096 145 aa10.5□□□□□ -0.73
SHKBP1-218ENST00000598907 MT-CO2P00403 227 aa10.5□□□□□ -0.73
SHKBP1-218ENST00000598907 TRGV3P03979 118 aa10.5□□□□□ -0.73
SHKBP1-218ENST00000598907 IFNA4P05014 189 aa10.5□□□□□ -0.73
SHKBP1-218ENST00000598907 GPX4P36969 197 aaPredicted RBP10.5□□□□□ -0.73
SHKBP1-218ENST00000598907 BAXQ07812 192 aa10.5□□□□□ -0.73
SHKBP1-218ENST00000598907 MLANAQ16655 118 aa10.5□□□□□ -0.73
SHKBP1-218ENST00000598907 ACOT7LQ6ZUV0 252 aa10.5□□□□□ -0.73
SHKBP1-218ENST00000598907 VN1R17PQ8TDU5 208 aa10.5□□□□□ -0.73
SHKBP1-218ENST00000598907 CACNG8Q8WXS5 425 aa10.5□□□□□ -0.73
SHKBP1-218ENST00000598907 MISP3Q96FF7 219 aa10.5□□□□□ -0.73
SHKBP1-218ENST00000598907 BSCL2Q96G97 398 aaPredicted RBP10.5□□□□□ -0.73
SHKBP1-218ENST00000598907 USMG5Q96IX5 58 aa10.5□□□□□ -0.73
SHKBP1-218ENST00000598907 HYLS1Q96M11 299 aa10.5□□□□□ -0.73
SHKBP1-218ENST00000598907 HSPB11Q9Y547 144 aa10.5□□□□□ -0.73
SHKBP1-218ENST00000598907 NUPR2A6NF83 97 aa10.49□□□□□ -0.73
SHKBP1-218ENST00000598907 FNDC10F2Z333 226 aa10.49□□□□□ -0.73
SHKBP1-218ENST00000598907 TPPP2P59282 170 aa10.49□□□□□ -0.73
SHKBP1-218ENST00000598907 DLK1P80370 383 aa10.49□□□□□ -0.73
SHKBP1-218ENST00000598907 DEFA5Q01523 94 aa10.49□□□□□ -0.73
SHKBP1-218ENST00000598907 C15orf32Q32M92 178 aa10.49□□□□□ -0.73
SHKBP1-218ENST00000598907 OR8G2PQ6IF36 304 aa10.49□□□□□ -0.73
SHKBP1-218ENST00000598907 STX12Q86Y82 276 aa10.49□□□□□ -0.73
SHKBP1-218ENST00000598907 OR10P1Q8NGE3 313 aa10.49□□□□□ -0.73
SHKBP1-218ENST00000598907 SCARB1Q8WTV0 552 aa10.49□□□□□ -0.73
SHKBP1-218ENST00000598907 GGACTQ9BVM4 153 aa10.49□□□□□ -0.73
SHKBP1-218ENST00000598907 PAIP2BQ9ULR5 123 aaKnown RBP10.49□□□□□ -0.73
SHKBP1-218ENST00000598907 PKHD1P08F94 4074 aa10.48□□□□□ -0.73
SHKBP1-218ENST00000598907 A0A0G2JLM5 398 aa10.48□□□□□ -0.73
SHKBP1-218ENST00000598907 RPS10-NUDT3A0A1W2PQS6 291 aa10.48□□□□□ -0.73
SHKBP1-218ENST00000598907 F8W735 103 aaPredicted RBP10.48□□□□□ -0.73
SHKBP1-218ENST00000598907 ARPC5O15511 151 aa10.48□□□□□ -0.73
SHKBP1-218ENST00000598907 IGLV1-51P01701 117 aa10.48□□□□□ -0.73
SHKBP1-218ENST00000598907 MED14OSP0DP75 135 aa10.48□□□□□ -0.73
SHKBP1-218ENST00000598907 CXCL2P19875 107 aa10.48□□□□□ -0.73
SHKBP1-218ENST00000598907 S100A11P31949 105 aa10.48□□□□□ -0.73
SHKBP1-218ENST00000598907 FCGR2BP31994 310 aaPredicted RBP10.48□□□□□ -0.73
SHKBP1-218ENST00000598907 OPRK1P41145 380 aa10.48□□□□□ -0.73
SHKBP1-218ENST00000598907 ATP5G2Q06055 141 aa10.48□□□□□ -0.73
SHKBP1-218ENST00000598907 SLC38A11Q08AI6 406 aa10.48□□□□□ -0.73
SHKBP1-218ENST00000598907 ZNF345Q14585 488 aa10.48□□□□□ -0.73
SHKBP1-218ENST00000598907 ATP6V1FQ16864 119 aa10.48□□□□□ -0.73
SHKBP1-218ENST00000598907 VWC2Q2TAL6 325 aa10.48□□□□□ -0.73
SHKBP1-218ENST00000598907 ZFP69Q49AA0 526 aa10.48□□□□□ -0.73
SHKBP1-218ENST00000598907 ETFRF1Q6IPR1 90 aa10.48□□□□□ -0.73
SHKBP1-218ENST00000598907 GTSCR1Q86UQ5 136 aa10.48□□□□□ -0.73
SHKBP1-218ENST00000598907 INO80EQ8NBZ0 244 aaPredicted RBP10.48□□□□□ -0.73
SHKBP1-218ENST00000598907 PINX1Q96BK5 328 aaKnown RBP10.48□□□□□ -0.73
SHKBP1-218ENST00000598907 CXorf58Q96LI9 332 aa10.48□□□□□ -0.73
SHKBP1-218ENST00000598907 ATP6V0BQ99437 205 aa10.48□□□□□ -0.73
SHKBP1-218ENST00000598907 MFFQ9GZY8 342 aa10.48□□□□□ -0.73
SHKBP1-218ENST00000598907 MRPL36Q9P0J6 103 aaKnown RBP10.48□□□□□ -0.73
SHKBP1-218ENST00000598907 VPS13DQ5THJ4 4388 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms