RNA–Protein interactions for RNA: ENST00000598309.1

USHBP1-208, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-208ENST00000598309 METTL26Q96S19 204 aa12.4□□□□□ -0.42
USHBP1-208ENST00000598309 IGHV3OR16-13A0A075B7E8 117 aa12.39□□□□□ -0.43
USHBP1-208ENST00000598309 IGHV3-74A0A0B4J1X5 117 aa12.39□□□□□ -0.43
USHBP1-208ENST00000598309 A0A1W2PS18 150 aa12.39□□□□□ -0.43
USHBP1-208ENST00000598309 CENPXA8MT69 81 aa12.39□□□□□ -0.43
USHBP1-208ENST00000598309 IL7P13232 177 aa12.39□□□□□ -0.43
USHBP1-208ENST00000598309 NPPCP23582 126 aa12.39□□□□□ -0.43
USHBP1-208ENST00000598309 OR10J1P30954 320 aa12.39□□□□□ -0.43
USHBP1-208ENST00000598309 CMC4P56277 68 aaPredicted RBP12.39□□□□□ -0.43
USHBP1-208ENST00000598309 YPEL3P61236 119 aaPredicted RBP12.39□□□□□ -0.43
USHBP1-208ENST00000598309 TCF24Q7RTU0 167 aa12.39□□□□□ -0.43
USHBP1-208ENST00000598309 RETNQ9HD89 108 aa12.39□□□□□ -0.43
USHBP1-208ENST00000598309 UBQLN2Q9UHD9 624 aa12.39□□□□□ -0.43
USHBP1-208ENST00000598309 TRAV2A0A0B4J234 112 aa12.38□□□□□ -0.43
USHBP1-208ENST00000598309 MED6O75586 246 aa12.38□□□□□ -0.43
USHBP1-208ENST00000598309 APOHP02749 345 aaPredicted RBP12.38□□□□□ -0.43
USHBP1-208ENST00000598309 CRYBB3P26998 211 aa12.38□□□□□ -0.43
USHBP1-208ENST00000598309 BTCP35070 178 aa12.38□□□□□ -0.43
USHBP1-208ENST00000598309 PAFAH1B2P68402 229 aa12.38□□□□□ -0.43
USHBP1-208ENST00000598309 C9orf170A2RU37 121 aa12.37□□□□□ -0.43
USHBP1-208ENST00000598309 IFNA4P05014 189 aa12.37□□□□□ -0.43
USHBP1-208ENST00000598309 APOC4P55056 127 aa12.37□□□□□ -0.43
USHBP1-208ENST00000598309 CNPY1Q3B7I2 92 aa12.37□□□□□ -0.43
USHBP1-208ENST00000598309 Q8WTZ3 238 aa12.37□□□□□ -0.43
USHBP1-208ENST00000598309 NPIPB3Q92617 1050 aa12.37□□□□□ -0.43
USHBP1-208ENST00000598309 NARS2Q96I59 477 aaKnown RBP12.37□□□□□ -0.43
USHBP1-208ENST00000598309 CIB3Q96Q77 187 aaPredicted RBP12.37□□□□□ -0.43
USHBP1-208ENST00000598309 LINC00854A0A1B0GVQ3 168 aa12.36□□□□□ -0.43
USHBP1-208ENST00000598309 DFFBO76075 338 aa12.36□□□□□ -0.43
USHBP1-208ENST00000598309 HOXB5P09067 269 aa12.36□□□□□ -0.43
USHBP1-208ENST00000598309 LYL1P12980 280 aa12.36□□□□□ -0.43
USHBP1-208ENST00000598309 GPX4P36969 197 aaPredicted RBP12.36□□□□□ -0.43
USHBP1-208ENST00000598309 DHRS2Q13268 280 aa12.36□□□□□ -0.43
USHBP1-208ENST00000598309 CASC10Q5T4H9 136 aa12.36□□□□□ -0.43
USHBP1-208ENST00000598309 GGNBP1Q5YKI7 109 aa12.36□□□□□ -0.43
USHBP1-208ENST00000598309 LINC00299Q6ZSB3 139 aa12.36□□□□□ -0.43
USHBP1-208ENST00000598309 LILRB2Q8N423 598 aa12.36□□□□□ -0.43
USHBP1-208ENST00000598309 COQ8AQ8NI60 647 aa12.36□□□□□ -0.43
USHBP1-208ENST00000598309 ACY3Q96HD9 319 aa12.36□□□□□ -0.43
USHBP1-208ENST00000598309 IGHV3-66A0A0C4DH42 116 aa12.35□□□□□ -0.43
USHBP1-208ENST00000598309 KIR2DL5BA0A0G2JN68 375 aa12.35□□□□□ -0.43
USHBP1-208ENST00000598309 KIR2DL5BA0A0G2JPC4 375 aa12.35□□□□□ -0.43
USHBP1-208ENST00000598309 UBE2CO00762 179 aa12.35□□□□□ -0.43
USHBP1-208ENST00000598309 TOMM40O96008 361 aa12.35□□□□□ -0.43
USHBP1-208ENST00000598309 TFPI2P48307 235 aa12.35□□□□□ -0.43
USHBP1-208ENST00000598309 RAB11AP62491 216 aa12.35□□□□□ -0.43
USHBP1-208ENST00000598309 LYG2Q86SG7 212 aa12.35□□□□□ -0.43
USHBP1-208ENST00000598309 KIR2DL5AQ8N109 375 aa12.35□□□□□ -0.43
USHBP1-208ENST00000598309 KIR2DL5BQ8NHK3 375 aa12.35□□□□□ -0.43
USHBP1-208ENST00000598309 GRAMD2BQ96HH9 432 aa12.35□□□□□ -0.43
USHBP1-208ENST00000598309 SLC35E1Q96K37 410 aa12.35□□□□□ -0.43
USHBP1-208ENST00000598309 MS4A6AQ9H2W1 248 aa12.35□□□□□ -0.43
USHBP1-208ENST00000598309 FLVCR2Q9UPI3 526 aa12.35□□□□□ -0.43
USHBP1-208ENST00000598309 U3KQE9 123 aa12.35□□□□□ -0.43
USHBP1-208ENST00000598309 IGKV3-7A0A075B6H7 116 aa12.34□□□□□ -0.43
USHBP1-208ENST00000598309 DNASE2O00115 360 aaPredicted RBP12.34□□□□□ -0.43
USHBP1-208ENST00000598309 SYNGR2O43760 224 aa12.34□□□□□ -0.43
USHBP1-208ENST00000598309 OR4E1P0C645 316 aa12.34□□□□□ -0.43
USHBP1-208ENST00000598309 P2RY1P47900 373 aa12.34□□□□□ -0.43
USHBP1-208ENST00000598309 RPP30P78346 268 aaKnown RBP12.34□□□□□ -0.43
USHBP1-208ENST00000598309 Q6ZWC4 215 aa12.34□□□□□ -0.43
USHBP1-208ENST00000598309 GBGT1Q8N5D6 347 aa12.34□□□□□ -0.43
USHBP1-208ENST00000598309 CCDC32Q9BV29 185 aa12.34□□□□□ -0.43
USHBP1-208ENST00000598309 MAP6D1Q9H9H5 199 aa12.34□□□□□ -0.43
USHBP1-208ENST00000598309 TP53TG1Q9Y2A0 90 aa12.34□□□□□ -0.43
USHBP1-208ENST00000598309 KMT2CQ8NEZ4 4911 aaKnown RBP12.33□□□□□ -0.44
USHBP1-208ENST00000598309 LYRM1O43325 122 aa12.33□□□□□ -0.44
USHBP1-208ENST00000598309 IL4P05112 153 aa12.33□□□□□ -0.44
USHBP1-208ENST00000598309 HNRNPCP07910 306 aaKnown RBP eCLIP12.33□□□□□ -0.44
USHBP1-208ENST00000598309 RD3LP0DJH9 198 aa12.33□□□□□ -0.44
USHBP1-208ENST00000598309 IAPPP10997 89 aa12.33□□□□□ -0.44
USHBP1-208ENST00000598309 ANXA7P20073 488 aaKnown RBP12.33□□□□□ -0.44
USHBP1-208ENST00000598309 EIF2B2P49770 351 aaKnown RBP12.33□□□□□ -0.44
USHBP1-208ENST00000598309 RPL11P62913 178 aaKnown RBP12.33□□□□□ -0.44
USHBP1-208ENST00000598309 GAMTQ14353 236 aa12.33□□□□□ -0.44
USHBP1-208ENST00000598309 C4orf46Q504U0 113 aa12.33□□□□□ -0.44
USHBP1-208ENST00000598309 OVOL2Q9BRP0 275 aa12.33□□□□□ -0.44
USHBP1-208ENST00000598309 NBEAL2Q6ZNJ1 2754 aa12.33□□□□□ -0.44
USHBP1-208ENST00000598309 DNAH7Q8WXX0 4024 aa12.33□□□□□ -0.44
USHBP1-208ENST00000598309 PLA2G10O15496 165 aa12.32□□□□□ -0.44
USHBP1-208ENST00000598309 ADAP1O75689 374 aa12.32□□□□□ -0.44
USHBP1-208ENST00000598309 IFNA21P01568 189 aa12.32□□□□□ -0.44
USHBP1-208ENST00000598309 PSG1P11464 419 aa12.32□□□□□ -0.44
USHBP1-208ENST00000598309 USF2Q15853 346 aaPredicted RBP12.32□□□□□ -0.44
USHBP1-208ENST00000598309 APRG1Q8IVJ8 170 aa12.32□□□□□ -0.44
USHBP1-208ENST00000598309 MAGT1Q9H0U3 335 aa12.32□□□□□ -0.44
USHBP1-208ENST00000598309 C20orf85Q9H1P6 137 aa12.32□□□□□ -0.44
USHBP1-208ENST00000598309 HELTA6NFD8 242 aa12.31□□□□□ -0.44
USHBP1-208ENST00000598309 ZFP92A6NM28 416 aa12.31□□□□□ -0.44
USHBP1-208ENST00000598309 FABP1P07148 127 aa12.31□□□□□ -0.44
USHBP1-208ENST00000598309 NUP62P37198 522 aaPredicted RBP12.31□□□□□ -0.44
USHBP1-208ENST00000598309 ID3Q02535 119 aa12.31□□□□□ -0.44
USHBP1-208ENST00000598309 C16orf54Q6UWD8 224 aa12.31□□□□□ -0.44
USHBP1-208ENST00000598309 WFDC3Q8IUB2 231 aa12.31□□□□□ -0.44
USHBP1-208ENST00000598309 STPG3Q8N7X2 389 aa12.31□□□□□ -0.44
USHBP1-208ENST00000598309 OR51G1Q8NGK1 321 aa12.31□□□□□ -0.44
USHBP1-208ENST00000598309 IL17DQ8TAD2 202 aa12.31□□□□□ -0.44
USHBP1-208ENST00000598309 GLMPQ8WWB7 406 aa12.31□□□□□ -0.44
USHBP1-208ENST00000598309 RABAC1Q9UI14 185 aa12.31□□□□□ -0.44
USHBP1-208ENST00000598309 IGKV1D-37A0A075B6S9 117 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms