RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 PRSS54Q6PEW0 395 aa16.98■□□□□ 0.31
SSBP4-205ENST00000598159 LGI3Q8N145 548 aa16.98■□□□□ 0.31
SSBP4-205ENST00000598159 TOMM5Q8N4H5 51 aa16.98■□□□□ 0.31
SSBP4-205ENST00000598159 OR1S2Q8NGQ3 325 aa16.98■□□□□ 0.31
SSBP4-205ENST00000598159 NARS2Q96I59 477 aaKnown RBP16.98■□□□□ 0.31
SSBP4-205ENST00000598159 U3KQ87 197 aa16.98■□□□□ 0.31
SSBP4-205ENST00000598159 JTBO76095 146 aa16.97■□□□□ 0.31
SSBP4-205ENST00000598159 S100A5P33763 92 aa16.97■□□□□ 0.31
SSBP4-205ENST00000598159 YPEL3P61236 119 aaPredicted RBP16.97■□□□□ 0.31
SSBP4-205ENST00000598159 KLF9Q13886 244 aaPredicted RBP16.97■□□□□ 0.31
SSBP4-205ENST00000598159 SMCO1Q147U7 214 aa16.97■□□□□ 0.31
SSBP4-205ENST00000598159 ZNF124Q15973 351 aa16.97■□□□□ 0.31
SSBP4-205ENST00000598159 LYG2Q86SG7 212 aa16.97■□□□□ 0.31
SSBP4-205ENST00000598159 Q8WTZ3 238 aa16.97■□□□□ 0.31
SSBP4-205ENST00000598159 PRR13Q9NZ81 148 aa16.97■□□□□ 0.31
SSBP4-205ENST00000598159 A0A0J9YWU9 116 aa16.96■□□□□ 0.31
SSBP4-205ENST00000598159 CCDC160A6NGH7 325 aa16.96■□□□□ 0.31
SSBP4-205ENST00000598159 MPTX1A8MV57 137 aa16.96■□□□□ 0.31
SSBP4-205ENST00000598159 NPY1RP25929 384 aa16.96■□□□□ 0.31
SSBP4-205ENST00000598159 LYZL2Q7Z4W2 148 aa16.96■□□□□ 0.31
SSBP4-205ENST00000598159 DEDD2Q8WXF8 326 aa16.96■□□□□ 0.31
SSBP4-205ENST00000598159 HSPB7Q9UBY9 170 aa16.96■□□□□ 0.31
SSBP4-205ENST00000598159 NXPH3O95157 252 aa16.95■□□□□ 0.3
SSBP4-205ENST00000598159 IFNA10P01566 189 aa16.95■□□□□ 0.3
SSBP4-205ENST00000598159 IGLC1P0CG04 106 aa16.95■□□□□ 0.3
SSBP4-205ENST00000598159 ATF4P18848 351 aaPredicted RBP16.95■□□□□ 0.3
SSBP4-205ENST00000598159 OR10J1P30954 320 aa16.95■□□□□ 0.3
SSBP4-205ENST00000598159 RND2P52198 227 aa16.95■□□□□ 0.3
SSBP4-205ENST00000598159 TMEM128Q5BJH2 165 aa16.95■□□□□ 0.3
SSBP4-205ENST00000598159 TMEM170AQ8WVE7 144 aa16.95■□□□□ 0.3
SSBP4-205ENST00000598159 TRIM63Q969Q1 353 aa16.95■□□□□ 0.3
SSBP4-205ENST00000598159 GRAMD2BQ96HH9 432 aa16.95■□□□□ 0.3
SSBP4-205ENST00000598159 ATP5IP56385 69 aaPredicted RBP16.94■□□□□ 0.3
SSBP4-205ENST00000598159 DEFB131AP59861 70 aa16.94■□□□□ 0.3
SSBP4-205ENST00000598159 RABAC1Q9UI14 185 aa16.94■□□□□ 0.3
SSBP4-205ENST00000598159 DUXBA0A1W2PPF3 345 aa16.93■□□□□ 0.3
SSBP4-205ENST00000598159 P2RY1P47900 373 aa16.93■□□□□ 0.3
SSBP4-205ENST00000598159 TMEM217Q8N7C4 229 aa16.93■□□□□ 0.3
SSBP4-205ENST00000598159 DTD1Q8TEA8 209 aa16.93■□□□□ 0.3
SSBP4-205ENST00000598159 GATAD1Q8WUU5 269 aa16.93■□□□□ 0.3
SSBP4-205ENST00000598159 NPIPB3Q92617 1050 aa16.93■□□□□ 0.3
SSBP4-205ENST00000598159 SLC25A21Q9BQT8 299 aaPredicted RBP16.93■□□□□ 0.3
SSBP4-205ENST00000598159 U3KQE9 123 aa16.93■□□□□ 0.3
SSBP4-205ENST00000598159 V9GYH0 126 aa16.93■□□□□ 0.3
SSBP4-205ENST00000598159 SACSQ9NZJ4 4579 aa16.93■□□□□ 0.3
SSBP4-205ENST00000598159 LYSTQ99698 3801 aa16.92■□□□□ 0.3
SSBP4-205ENST00000598159 EIF2B2P49770 351 aaKnown RBP16.92■□□□□ 0.3
SSBP4-205ENST00000598159 RBMS2Q15434 407 aaKnown RBP16.92■□□□□ 0.3
SSBP4-205ENST00000598159 RBKSQ9H477 322 aa16.92■□□□□ 0.3
SSBP4-205ENST00000598159 K7EQG2 157 aa16.91■□□□□ 0.3
SSBP4-205ENST00000598159 HNRNPCP07910 306 aaKnown RBP eCLIP16.91■□□□□ 0.3
SSBP4-205ENST00000598159 AP2S1P53680 142 aaPredicted RBP16.91■□□□□ 0.3
SSBP4-205ENST00000598159 ZNF79Q15937 498 aa16.91■□□□□ 0.3
SSBP4-205ENST00000598159 TMED4Q7Z7H5 227 aa16.91■□□□□ 0.3
SSBP4-205ENST00000598159 CCDC190Q86UF4 302 aa16.91■□□□□ 0.3
SSBP4-205ENST00000598159 STXBP6Q8NFX7 210 aa16.91■□□□□ 0.3
SSBP4-205ENST00000598159 OR1S1Q8NH92 325 aa16.91■□□□□ 0.3
SSBP4-205ENST00000598159 RARRES2Q99969 163 aa16.91■□□□□ 0.3
SSBP4-205ENST00000598159 ZNF701M0R085 212 aaPredicted RBP16.9■□□□□ 0.3
SSBP4-205ENST00000598159 RD3LP0DJH9 198 aa16.9■□□□□ 0.3
SSBP4-205ENST00000598159 LEMD1Q68G75 181 aa16.9■□□□□ 0.3
SSBP4-205ENST00000598159 FAM24BQ8N5W8 94 aa16.9■□□□□ 0.3
SSBP4-205ENST00000598159 ACY3Q96HD9 319 aa16.9■□□□□ 0.3
SSBP4-205ENST00000598159 CXorf65A6NEN9 183 aa16.89■□□□□ 0.29
SSBP4-205ENST00000598159 HELTA6NFD8 242 aa16.89■□□□□ 0.29
SSBP4-205ENST00000598159 TOMM40O96008 361 aa16.89■□□□□ 0.29
SSBP4-205ENST00000598159 IFNA4P05014 189 aa16.89■□□□□ 0.29
SSBP4-205ENST00000598159 SLC25A6P12236 298 aa16.89■□□□□ 0.29
SSBP4-205ENST00000598159 GPX4P36969 197 aaPredicted RBP16.89■□□□□ 0.29
SSBP4-205ENST00000598159 EWSR1Q01844 656 aaKnown RBP eCLIP16.89■□□□□ 0.294e-7■■■■□ 23.8
SSBP4-205ENST00000598159 C16orf54Q6UWD8 224 aa16.89■□□□□ 0.29
SSBP4-205ENST00000598159 STHQ8IWL8 128 aa16.89■□□□□ 0.29
SSBP4-205ENST00000598159 LRTM2Q8N967 370 aa16.89■□□□□ 0.29
SSBP4-205ENST00000598159 RBM38Q9H0Z9 239 aaKnown RBP16.89■□□□□ 0.29
SSBP4-205ENST00000598159 NUPR2A6NF83 97 aa16.88■□□□□ 0.29
SSBP4-205ENST00000598159 PITX3O75364 302 aa16.88■□□□□ 0.29
SSBP4-205ENST00000598159 IL4P05112 153 aa16.88■□□□□ 0.29
SSBP4-205ENST00000598159 DCANP1Q8TF63 244 aa16.88■□□□□ 0.29
SSBP4-205ENST00000598159 VAMP1P23763 118 aa16.87■□□□□ 0.29
SSBP4-205ENST00000598159 PMS2P11Q13670 270 aa16.87■□□□□ 0.29
SSBP4-205ENST00000598159 SPANXN2Q5MJ10 180 aa16.87■□□□□ 0.29
SSBP4-205ENST00000598159 GLMPQ8WWB7 406 aa16.87■□□□□ 0.29
SSBP4-205ENST00000598159 SFT2D2O95562 160 aa16.86■□□□□ 0.29
SSBP4-205ENST00000598159 CA1P00915 261 aaPredicted RBP16.86■□□□□ 0.29
SSBP4-205ENST00000598159 DHRS2Q13268 280 aa16.86■□□□□ 0.29
SSBP4-205ENST00000598159 USF2Q15853 346 aaPredicted RBP16.86■□□□□ 0.29
SSBP4-205ENST00000598159 CEMP1Q6PRD7 247 aaPredicted RBP16.86■□□□□ 0.29
SSBP4-205ENST00000598159 OR11H2Q8NH07 326 aa16.86■□□□□ 0.29
SSBP4-205ENST00000598159 TMED3Q9Y3Q3 217 aa16.86■□□□□ 0.29
SSBP4-205ENST00000598159 FAM90A26D6RGX4 464 aa16.85■□□□□ 0.29
SSBP4-205ENST00000598159 MED6O75586 246 aa16.85■□□□□ 0.29
SSBP4-205ENST00000598159 PSG1P11464 419 aa16.85■□□□□ 0.29
SSBP4-205ENST00000598159 RAB11AP62491 216 aa16.85■□□□□ 0.29
SSBP4-205ENST00000598159 OR51G1Q8NGK1 321 aa16.85■□□□□ 0.29
SSBP4-205ENST00000598159 BUB3O43684 328 aa16.84■□□□□ 0.29
SSBP4-205ENST00000598159 ZNF688P0C7X2 276 aa16.84■□□□□ 0.29
SSBP4-205ENST00000598159 GAMTQ14353 236 aa16.84■□□□□ 0.29
SSBP4-205ENST00000598159 TMEM41BQ5BJD5 291 aa16.84■□□□□ 0.29
SSBP4-205ENST00000598159 CENPSQ8N2Z9 138 aa16.84■□□□□ 0.29
SSBP4-205ENST00000598159 PFDN2Q9UHV9 154 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms