RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 FOLR2P14207 255 aa15.43■□□□□ 0.06
PNKP-211ENST00000598020 CBLN1P23435 193 aa15.43■□□□□ 0.06
PNKP-211ENST00000598020 H2BFSP57053 126 aa15.43■□□□□ 0.06
PNKP-211ENST00000598020 RAB32Q13637 225 aa15.43■□□□□ 0.06
PNKP-211ENST00000598020 SLC35E1Q96K37 410 aa15.43■□□□□ 0.06
PNKP-211ENST00000598020 DAZ1Q9NQZ3 744 aaKnown RBP15.43■□□□□ 0.06
PNKP-211ENST00000598020 L7N2F9 121 aa15.42■□□□□ 0.06
PNKP-211ENST00000598020 PVALBP20472 110 aaPredicted RBP15.42■□□□□ 0.06
PNKP-211ENST00000598020 OR10J1P30954 320 aa15.42■□□□□ 0.06
PNKP-211ENST00000598020 YPEL3P61236 119 aaPredicted RBP15.42■□□□□ 0.06
PNKP-211ENST00000598020 VAMP2P63027 116 aa15.42■□□□□ 0.06
PNKP-211ENST00000598020 TM4SF20Q53R12 229 aa15.42■□□□□ 0.06
PNKP-211ENST00000598020 ACY3Q96HD9 319 aa15.42■□□□□ 0.06
PNKP-211ENST00000598020 TECRQ9NZ01 308 aaKnown RBP15.42■□□□□ 0.06
PNKP-211ENST00000598020 MRPL27Q9P0M9 148 aaKnown RBP15.42■□□□□ 0.06
PNKP-211ENST00000598020 S100A10P60903 97 aa15.41■□□□□ 0.06
PNKP-211ENST00000598020 TIGITQ495A1 244 aa15.41■□□□□ 0.06
PNKP-211ENST00000598020 TOMM20LQ6UXN7 152 aa15.41■□□□□ 0.06
PNKP-211ENST00000598020 OR2K2Q8NGT1 345 aa15.41■□□□□ 0.06
PNKP-211ENST00000598020 MGAT4CQ9UBM8 478 aa15.41■□□□□ 0.06
PNKP-211ENST00000598020 DEFA6Q01524 100 aa15.4■□□□□ 0.06
PNKP-211ENST00000598020 ZFAND3Q9H8U3 227 aa15.4■□□□□ 0.06
PNKP-211ENST00000598020 PUS1Q9Y606 427 aaKnown RBP eCLIP15.4■□□□□ 0.06
PNKP-211ENST00000598020 FNDC10F2Z333 226 aa15.39■□□□□ 0.05
PNKP-211ENST00000598020 DEDDO75618 318 aa15.39■□□□□ 0.05
PNKP-211ENST00000598020 YIF1AO95070 293 aa15.39■□□□□ 0.05
PNKP-211ENST00000598020 SCAF4O95104 1147 aaKnown RBP15.39■□□□□ 0.05
PNKP-211ENST00000598020 METTL15P1P0C7V9 234 aa15.39■□□□□ 0.05
PNKP-211ENST00000598020 EDN2P20800 178 aa15.39■□□□□ 0.05
PNKP-211ENST00000598020 DEFB114Q30KQ6 69 aa15.39■□□□□ 0.05
PNKP-211ENST00000598020 THAP8Q8NA92 274 aa15.39■□□□□ 0.05
PNKP-211ENST00000598020 OR10P1Q8NGE3 313 aa15.39■□□□□ 0.05
PNKP-211ENST00000598020 C20orf24Q9BUV8 137 aa15.39■□□□□ 0.05
PNKP-211ENST00000598020 MED28Q9H204 178 aa15.39■□□□□ 0.05
PNKP-211ENST00000598020 LYRM2Q9NU23 88 aaPredicted RBP15.39■□□□□ 0.05
PNKP-211ENST00000598020 IGKV1D-37A0A075B6S9 117 aa15.38■□□□□ 0.05
PNKP-211ENST00000598020 RLN2P04090 185 aa15.38■□□□□ 0.05
PNKP-211ENST00000598020 DLK1P80370 383 aa15.38■□□□□ 0.05
PNKP-211ENST00000598020 OR8G2PQ6IF36 304 aa15.38■□□□□ 0.05
PNKP-211ENST00000598020 ACOT7LQ6ZUV0 252 aa15.38■□□□□ 0.05
PNKP-211ENST00000598020 Q8WTZ3 238 aa15.38■□□□□ 0.05
PNKP-211ENST00000598020 GINS3Q9BRX5 216 aa15.38■□□□□ 0.05
PNKP-211ENST00000598020 GGACTQ9BVM4 153 aa15.38■□□□□ 0.05
PNKP-211ENST00000598020 AURKAIP1Q9NWT8 199 aaPredicted RBP15.38■□□□□ 0.05
PNKP-211ENST00000598020 ZNF256Q9Y2P7 627 aaPredicted RBP15.38■□□□□ 0.05
PNKP-211ENST00000598020 CCNKO75909 580 aa15.37■□□□□ 0.05
PNKP-211ENST00000598020 TOMM40O96008 361 aa15.37■□□□□ 0.05
PNKP-211ENST00000598020 CXCL3P19876 107 aa15.37■□□□□ 0.05
PNKP-211ENST00000598020 HAPLN4Q86UW8 402 aa15.37■□□□□ 0.05
PNKP-211ENST00000598020 DYNLRB2Q8TF09 96 aa15.37■□□□□ 0.05
PNKP-211ENST00000598020 PPP1R1CQ8WVI7 109 aa15.37■□□□□ 0.05
PNKP-211ENST00000598020 WDR89Q96FK6 387 aaPredicted RBP15.37■□□□□ 0.05
PNKP-211ENST00000598020 TRGV9Q99603 122 aa15.37■□□□□ 0.05
PNKP-211ENST00000598020 SMPXQ9UHP9 88 aa15.37■□□□□ 0.05
PNKP-211ENST00000598020 DNAH3Q8TD57 4116 aa15.37■□□□□ 0.05
PNKP-211ENST00000598020 MEGF8Q7Z7M0 2845 aa15.37■□□□□ 0.05
PNKP-211ENST00000598020 IGKV1OR2-108A0A075B7D4 117 aa15.36■□□□□ 0.05
PNKP-211ENST00000598020 IGHV3OR16-8A0A075B7F1 116 aa15.36■□□□□ 0.05
PNKP-211ENST00000598020 TRAV14DV4A0A0A6YYC5 116 aa15.36■□□□□ 0.05
PNKP-211ENST00000598020 IGHV7-4-1A0A0J9YVY3 117 aa15.36■□□□□ 0.05
PNKP-211ENST00000598020 FAM24AA6NFZ4 105 aa15.36■□□□□ 0.05
PNKP-211ENST00000598020 ZFP92A6NM28 416 aa15.36■□□□□ 0.05
PNKP-211ENST00000598020 E5RGE8 158 aa15.36■□□□□ 0.05
PNKP-211ENST00000598020 H0YIZ8 118 aa15.36■□□□□ 0.05
PNKP-211ENST00000598020 BCAP31P51572 246 aa15.36■□□□□ 0.05
PNKP-211ENST00000598020 CAV2P51636 162 aa15.36■□□□□ 0.05
PNKP-211ENST00000598020 ARL16Q0P5N6 197 aa15.36■□□□□ 0.05
PNKP-211ENST00000598020 FCN2Q15485 313 aa15.36■□□□□ 0.05
PNKP-211ENST00000598020 CD300EQ496F6 205 aaPredicted RBP15.36■□□□□ 0.05
PNKP-211ENST00000598020 LCN12Q6JVE5 192 aa15.36■□□□□ 0.05
PNKP-211ENST00000598020 TMEM144Q7Z5S9 345 aa15.36■□□□□ 0.05
PNKP-211ENST00000598020 TMEM252Q8N6L7 170 aa15.36■□□□□ 0.05
PNKP-211ENST00000598020 MLXQ9UH92 298 aa15.36■□□□□ 0.05
PNKP-211ENST00000598020 PRB2P02812 416 aaPredicted RBP15.35■□□□□ 0.05
PNKP-211ENST00000598020 FABP1P07148 127 aa15.35■□□□□ 0.05
PNKP-211ENST00000598020 RD3LP0DJH9 198 aa15.35■□□□□ 0.05
PNKP-211ENST00000598020 OR11H7Q8NGC8 314 aa15.35■□□□□ 0.05
PNKP-211ENST00000598020 TRAV25A0A0B4J276 109 aa15.34■□□□□ 0.05
PNKP-211ENST00000598020 ZNF207O43670 478 aaKnown RBP15.34■□□□□ 0.05
PNKP-211ENST00000598020 MPC2O95563 127 aa15.34■□□□□ 0.05
PNKP-211ENST00000598020 PSG1P11464 419 aa15.34■□□□□ 0.05
PNKP-211ENST00000598020 GP9P14770 177 aa15.34■□□□□ 0.05
PNKP-211ENST00000598020 P2RY1P47900 373 aa15.34■□□□□ 0.05
PNKP-211ENST00000598020 SULT1A1P50225 295 aa15.34■□□□□ 0.05
PNKP-211ENST00000598020 RRAS2P62070 204 aaPredicted RBP15.34■□□□□ 0.05
PNKP-211ENST00000598020 LRRC37A5PQ49AS3 106 aa15.34■□□□□ 0.05
PNKP-211ENST00000598020 ASB13Q8WXK3 278 aa15.34■□□□□ 0.05
PNKP-211ENST00000598020 RNF126Q9BV68 326 aa15.34■□□□□ 0.05
PNKP-211ENST00000598020 NPVFQ9HCQ7 196 aa15.34■□□□□ 0.05
PNKP-211ENST00000598020 OR5AC2Q9NZP5 309 aa15.34■□□□□ 0.05
PNKP-211ENST00000598020 WI2-2373I1.2A0A1W2PRP0 233 aa15.33■□□□□ 0.04
PNKP-211ENST00000598020 IGSF23A1L1A6 192 aa15.33■□□□□ 0.04
PNKP-211ENST00000598020 IZUMO1RA6ND01 250 aa15.33■□□□□ 0.04
PNKP-211ENST00000598020 CHEK1O14757 476 aa15.33■□□□□ 0.04
PNKP-211ENST00000598020 PET100P0DJ07 73 aa15.33■□□□□ 0.04
PNKP-211ENST00000598020 CRYBB3P26998 211 aa15.33■□□□□ 0.04
PNKP-211ENST00000598020 ZNF90Q03938 601 aa15.33■□□□□ 0.04
PNKP-211ENST00000598020 AKR1C1Q04828 323 aa15.33■□□□□ 0.04
PNKP-211ENST00000598020 BTNL8Q6UX41 500 aa15.33■□□□□ 0.04
PNKP-211ENST00000598020 STX12Q86Y82 276 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms