RNA–Protein interactions for RNA: ENST00000597811.5

XRCC1-206, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 5

Gene XRCC1, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-206ENST00000597811 IGHV3-49A0A0A0MS15 119 aa11.65□□□□□ -0.54
XRCC1-206ENST00000597811 C15orf62A8K5M9 175 aa11.65□□□□□ -0.54
XRCC1-206ENST00000597811 CCSO14618 274 aa11.65□□□□□ -0.54
XRCC1-206ENST00000597811 SSSCA1O60232 199 aa11.65□□□□□ -0.54
XRCC1-206ENST00000597811 FRMD6-AS1P0C7T7 363 aa11.65□□□□□ -0.54
XRCC1-206ENST00000597811 ATP5IP56385 69 aaPredicted RBP11.65□□□□□ -0.54
XRCC1-206ENST00000597811 POLR2GP62487 172 aaKnown RBP eCLIP11.65□□□□□ -0.54
XRCC1-206ENST00000597811 TIGITQ495A1 244 aa11.65□□□□□ -0.54
XRCC1-206ENST00000597811 SLC16A13Q7RTY0 426 aa11.65□□□□□ -0.54
XRCC1-206ENST00000597811 C12orf45Q8N5I9 185 aaPredicted RBP11.65□□□□□ -0.54
XRCC1-206ENST00000597811 TMEM170AQ8WVE7 144 aa11.65□□□□□ -0.54
XRCC1-206ENST00000597811 NPIPB3Q92617 1050 aa11.65□□□□□ -0.54
XRCC1-206ENST00000597811 WDR89Q96FK6 387 aaPredicted RBP11.65□□□□□ -0.54
XRCC1-206ENST00000597811 SLC35E1Q96K37 410 aa11.65□□□□□ -0.54
XRCC1-206ENST00000597811 GPN1Q9HCN4 374 aaPredicted RBP11.65□□□□□ -0.54
XRCC1-206ENST00000597811 TRAV14DV4A0A0A6YYC5 116 aa11.64□□□□□ -0.55
XRCC1-206ENST00000597811 H3BP45 60 aa11.64□□□□□ -0.55
XRCC1-206ENST00000597811 K7EMT4 169 aa11.64□□□□□ -0.55
XRCC1-206ENST00000597811 OR10J1P30954 320 aa11.64□□□□□ -0.55
XRCC1-206ENST00000597811 CD81P60033 236 aa11.64□□□□□ -0.55
XRCC1-206ENST00000597811 LAMTOR1Q6IAA8 161 aa11.64□□□□□ -0.55
XRCC1-206ENST00000597811 PRSS54Q6PEW0 395 aa11.64□□□□□ -0.55
XRCC1-206ENST00000597811 TOMM20LQ6UXN7 152 aa11.64□□□□□ -0.55
XRCC1-206ENST00000597811 NRARPQ7Z6K4 114 aa11.64□□□□□ -0.55
XRCC1-206ENST00000597811 Q8N1Y9 231 aa11.64□□□□□ -0.55
XRCC1-206ENST00000597811 TMEM116Q8NCL8 245 aa11.64□□□□□ -0.55
XRCC1-206ENST00000597811 PSENENQ9NZ42 101 aa11.64□□□□□ -0.55
XRCC1-206ENST00000597811 STRAPQ9Y3F4 350 aaKnown RBP11.64□□□□□ -0.55
XRCC1-206ENST00000597811 IGHV3OR16-13A0A075B7E8 117 aa11.63□□□□□ -0.55
XRCC1-206ENST00000597811 IGHV3-74A0A0B4J1X5 117 aa11.63□□□□□ -0.55
XRCC1-206ENST00000597811 BMI1P35226 326 aa11.63□□□□□ -0.55
XRCC1-206ENST00000597811 TMEM61Q8N0U2 210 aa11.63□□□□□ -0.55
XRCC1-206ENST00000597811 ZBTB8BQ8NAP8 495 aaPredicted RBP11.63□□□□□ -0.55
XRCC1-206ENST00000597811 OR4D5Q8NGN0 318 aa11.63□□□□□ -0.55
XRCC1-206ENST00000597811 OR1S2Q8NGQ3 325 aa11.63□□□□□ -0.55
XRCC1-206ENST00000597811 Q8WTZ3 238 aa11.63□□□□□ -0.55
XRCC1-206ENST00000597811 OR10C1Q96KK4 312 aa11.63□□□□□ -0.55
XRCC1-206ENST00000597811 TUBA4BQ9H853 241 aa11.63□□□□□ -0.55
XRCC1-206ENST00000597811 CSMD3Q7Z407 3707 aa11.62□□□□□ -0.55
XRCC1-206ENST00000597811 DYNC2H1Q8NCM8 4307 aaKnown RBP11.62□□□□□ -0.55
XRCC1-206ENST00000597811 IGHV7-4-1A0A0J9YVY3 117 aa11.62□□□□□ -0.55
XRCC1-206ENST00000597811 ZFP92A6NM28 416 aa11.62□□□□□ -0.55
XRCC1-206ENST00000597811 C8orf88P0DMB2 117 aa11.62□□□□□ -0.55
XRCC1-206ENST00000597811 IGHV4-30-4P0DP06 118 aa11.62□□□□□ -0.55
XRCC1-206ENST00000597811 ID3Q02535 119 aa11.62□□□□□ -0.55
XRCC1-206ENST00000597811 GSG1LQ6UXU4 331 aa11.62□□□□□ -0.55
XRCC1-206ENST00000597811 NARS2Q96I59 477 aaKnown RBP11.62□□□□□ -0.55
XRCC1-206ENST00000597811 NEURL2Q9BR09 285 aa11.62□□□□□ -0.55
XRCC1-206ENST00000597811 RHPN1-AS1Q9BWJ2 59 aa11.62□□□□□ -0.55
XRCC1-206ENST00000597811 SMPXQ9UHP9 88 aa11.62□□□□□ -0.55
XRCC1-206ENST00000597811 IGKV3-7A0A075B6H7 116 aa11.61□□□□□ -0.55
XRCC1-206ENST00000597811 IGHV3-66A0A0C4DH42 116 aa11.61□□□□□ -0.55
XRCC1-206ENST00000597811 ZNF785A8K8V0 405 aa11.61□□□□□ -0.55
XRCC1-206ENST00000597811 INMT-MINDY4F8WBC2 141 aa11.61□□□□□ -0.55
XRCC1-206ENST00000597811 L7N2F9 121 aa11.61□□□□□ -0.55
XRCC1-206ENST00000597811 IL5P05113 134 aa11.61□□□□□ -0.55
XRCC1-206ENST00000597811 NPPCP23582 126 aa11.61□□□□□ -0.55
XRCC1-206ENST00000597811 GPX4P36969 197 aaPredicted RBP11.61□□□□□ -0.55
XRCC1-206ENST00000597811 RPL11P62913 178 aaKnown RBP11.61□□□□□ -0.55
XRCC1-206ENST00000597811 VAMP2P63027 116 aa11.61□□□□□ -0.55
XRCC1-206ENST00000597811 METTL26Q96S19 204 aa11.61□□□□□ -0.55
XRCC1-206ENST00000597811 LSM5Q9Y4Y9 91 aaKnown RBP11.61□□□□□ -0.55
XRCC1-206ENST00000597811 TRAV25A0A0B4J276 109 aa11.6□□□□□ -0.55
XRCC1-206ENST00000597811 SMCO3A2RU48 225 aa11.6□□□□□ -0.55
XRCC1-206ENST00000597811 IGKV1-17P01599 117 aa11.6□□□□□ -0.55
XRCC1-206ENST00000597811 CD7P09564 240 aa11.6□□□□□ -0.55
XRCC1-206ENST00000597811 IGLC1P0CG04 106 aa11.6□□□□□ -0.55
XRCC1-206ENST00000597811 RD3LP0DJH9 198 aa11.6□□□□□ -0.55
XRCC1-206ENST00000597811 OR8G2PQ6IF36 304 aa11.6□□□□□ -0.55
XRCC1-206ENST00000597811 RCHY1Q96PM5 261 aa11.6□□□□□ -0.55
XRCC1-206ENST00000597811 TMEM231Q9H6L2 316 aa11.6□□□□□ -0.55
XRCC1-206ENST00000597811 ZFAND3Q9H8U3 227 aa11.6□□□□□ -0.55
XRCC1-206ENST00000597811 A0A1W2PS18 150 aa11.59□□□□□ -0.55
XRCC1-206ENST00000597811 CHEK1O14757 476 aa11.59□□□□□ -0.55
XRCC1-206ENST00000597811 PRAF2O60831 178 aa11.59□□□□□ -0.55
XRCC1-206ENST00000597811 FABP1P07148 127 aa11.59□□□□□ -0.55
XRCC1-206ENST00000597811 TFPI2P48307 235 aa11.59□□□□□ -0.55
XRCC1-206ENST00000597811 BCAP31P51572 246 aa11.59□□□□□ -0.55
XRCC1-206ENST00000597811 S100A10P60903 97 aa11.59□□□□□ -0.55
XRCC1-206ENST00000597811 YPEL3P61236 119 aaPredicted RBP11.59□□□□□ -0.55
XRCC1-206ENST00000597811 AKR1C1Q04828 323 aa11.59□□□□□ -0.55
XRCC1-206ENST00000597811 GAMTQ14353 236 aa11.59□□□□□ -0.55
XRCC1-206ENST00000597811 C2orf50Q96LR7 162 aa11.59□□□□□ -0.55
XRCC1-206ENST00000597811 RAB40CQ96S21 281 aa11.59□□□□□ -0.55
XRCC1-206ENST00000597811 RNF2Q99496 336 aa11.59□□□□□ -0.55
XRCC1-206ENST00000597811 C19orf73Q9NVV2 129 aa11.59□□□□□ -0.55
XRCC1-206ENST00000597811 RCL1Q9Y2P8 373 aaKnown RBP11.59□□□□□ -0.55
XRCC1-206ENST00000597811 STARD9Q9P2P6 4700 aa11.59□□□□□ -0.55
XRCC1-206ENST00000597811 SACSQ9NZJ4 4579 aa11.59□□□□□ -0.55
XRCC1-206ENST00000597811 A8MZ25 164 aa11.58□□□□□ -0.56
XRCC1-206ENST00000597811 OR11H12B2RN74 326 aa11.58□□□□□ -0.56
XRCC1-206ENST00000597811 GOSR2O14653 212 aa11.58□□□□□ -0.56
XRCC1-206ENST00000597811 MBPP02686 304 aaPredicted RBP11.58□□□□□ -0.56
XRCC1-206ENST00000597811 IL4P05112 153 aa11.58□□□□□ -0.56
XRCC1-206ENST00000597811 ST8SIA2Q92186 375 aa11.58□□□□□ -0.56
XRCC1-206ENST00000597811 ZNF414Q96IQ9 312 aa11.58□□□□□ -0.56
XRCC1-206ENST00000597811 SMIM8Q96KF7 97 aa11.58□□□□□ -0.56
XRCC1-206ENST00000597811 SPAG8Q99932 426 aaPredicted RBP11.58□□□□□ -0.56
XRCC1-206ENST00000597811 PBDC1Q9BVG4 233 aa11.58□□□□□ -0.56
XRCC1-206ENST00000597811 OR4C46A6NHA9 309 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms