RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 SCGB2A1O75556 95 aa12.43□□□□□ -0.42
CCDC9-202ENST00000595659 DEDDO75618 318 aa12.43□□□□□ -0.42
CCDC9-202ENST00000595659 IGLC1P0CG04 106 aa12.43□□□□□ -0.42
CCDC9-202ENST00000595659 SLC24A4Q8NFF2 622 aa12.43□□□□□ -0.42
CCDC9-202ENST00000595659 TRAV30A0A087WSZ9 112 aa12.42□□□□□ -0.42
CCDC9-202ENST00000595659 GIG44P09565 113 aaPredicted RBP12.42□□□□□ -0.42
CCDC9-202ENST00000595659 OR10J1P30954 320 aa12.42□□□□□ -0.42
CCDC9-202ENST00000595659 SURF2Q15527 256 aaPredicted RBP12.42□□□□□ -0.42
CCDC9-202ENST00000595659 C2orf83Q53S99 150 aa12.42□□□□□ -0.42
CCDC9-202ENST00000595659 OR1S2Q8NGQ3 325 aa12.42□□□□□ -0.42
CCDC9-202ENST00000595659 Q8WTZ3 238 aa12.42□□□□□ -0.42
CCDC9-202ENST00000595659 ACY3Q96HD9 319 aa12.42□□□□□ -0.42
CCDC9-202ENST00000595659 NARS2Q96I59 477 aaKnown RBP12.42□□□□□ -0.42
CCDC9-202ENST00000595659 PRRT1Q99946 306 aa12.42□□□□□ -0.42
CCDC9-202ENST00000595659 TMEM56-RWDD3S4R434 201 aa12.42□□□□□ -0.42
CCDC9-202ENST00000595659 CTDSPLO15194 276 aa12.41□□□□□ -0.42
CCDC9-202ENST00000595659 ACTL10Q5JWF8 245 aa12.41□□□□□ -0.42
CCDC9-202ENST00000595659 TRPT1Q86TN4 253 aaKnown RBP12.41□□□□□ -0.42
CCDC9-202ENST00000595659 DYNC2LI1Q8TCX1 351 aa12.41□□□□□ -0.42
CCDC9-202ENST00000595659 RNASEH2CQ8TDP1 164 aaKnown RBP12.41□□□□□ -0.42
CCDC9-202ENST00000595659 DCANP1Q8TF63 244 aa12.41□□□□□ -0.42
CCDC9-202ENST00000595659 NPIPB3Q92617 1050 aa12.41□□□□□ -0.42
CCDC9-202ENST00000595659 GRAMD2BQ96HH9 432 aa12.41□□□□□ -0.42
CCDC9-202ENST00000595659 C11orf68Q9H3H3 251 aaKnown RBP12.41□□□□□ -0.42
CCDC9-202ENST00000595659 MCUBQ9NWR8 336 aa12.41□□□□□ -0.42
CCDC9-202ENST00000595659 CLEC5AQ9NY25 188 aa12.41□□□□□ -0.42
CCDC9-202ENST00000595659 U3KQE9 123 aa12.41□□□□□ -0.42
CCDC9-202ENST00000595659 ANKRD20A5PA0PJZ0 165 aa12.4□□□□□ -0.42
CCDC9-202ENST00000595659 IFNA4P05014 189 aa12.4□□□□□ -0.42
CCDC9-202ENST00000595659 HNRNPCP07910 306 aaKnown RBP eCLIP12.4□□□□□ -0.42
CCDC9-202ENST00000595659 SULT1A3P0DMM9 295 aa12.4□□□□□ -0.42
CCDC9-202ENST00000595659 SULT1A4P0DMN0 295 aa12.4□□□□□ -0.42
CCDC9-202ENST00000595659 SLC25A4P12235 298 aa12.4□□□□□ -0.42
CCDC9-202ENST00000595659 AKR1C4P17516 323 aa12.4□□□□□ -0.42
CCDC9-202ENST00000595659 C4BPBP20851 252 aa12.4□□□□□ -0.42
CCDC9-202ENST00000595659 NPY1RP25929 384 aa12.4□□□□□ -0.42
CCDC9-202ENST00000595659 DHRS2Q13268 280 aa12.4□□□□□ -0.42
CCDC9-202ENST00000595659 USF2Q15853 346 aaPredicted RBP12.4□□□□□ -0.42
CCDC9-202ENST00000595659 LYZL2Q7Z4W2 148 aa12.4□□□□□ -0.42
CCDC9-202ENST00000595659 MFFQ9GZY8 342 aa12.4□□□□□ -0.42
CCDC9-202ENST00000595659 CCDC59Q9P031 241 aaKnown RBP12.4□□□□□ -0.42
CCDC9-202ENST00000595659 KCNIP3Q9Y2W7 256 aa12.4□□□□□ -0.42
CCDC9-202ENST00000595659 IFNA10P01566 189 aa12.39□□□□□ -0.43
CCDC9-202ENST00000595659 IL4P05112 153 aa12.39□□□□□ -0.43
CCDC9-202ENST00000595659 RBMY1A1P0DJD3 496 aaKnown RBP12.39□□□□□ -0.43
CCDC9-202ENST00000595659 RBMY1CP0DJD4 496 aa12.39□□□□□ -0.43
CCDC9-202ENST00000595659 RBMY1FQ15415 496 aaKnown RBP12.39□□□□□ -0.43
CCDC9-202ENST00000595659 PSMG4Q5JS54 123 aa12.39□□□□□ -0.43
CCDC9-202ENST00000595659 C16orf54Q6UWD8 224 aa12.39□□□□□ -0.43
CCDC9-202ENST00000595659 RAB2BQ8WUD1 216 aa12.39□□□□□ -0.43
CCDC9-202ENST00000595659 GLMPQ8WWB7 406 aa12.39□□□□□ -0.43
CCDC9-202ENST00000595659 IGHV4-28A0A0C4DH34 117 aa12.38□□□□□ -0.43
CCDC9-202ENST00000595659 GSTZ1O43708 216 aaPredicted RBP12.38□□□□□ -0.43
CCDC9-202ENST00000595659 YPEL3P61236 119 aaPredicted RBP12.38□□□□□ -0.43
CCDC9-202ENST00000595659 NMSQ5H8A3 153 aa12.38□□□□□ -0.43
CCDC9-202ENST00000595659 Q8NAQ8 132 aa12.38□□□□□ -0.43
CCDC9-202ENST00000595659 RAB40CQ96S21 281 aa12.38□□□□□ -0.43
CCDC9-202ENST00000595659 RBKSQ9H477 322 aa12.38□□□□□ -0.43
CCDC9-202ENST00000595659 SCP2D1Q9UJQ7 156 aa12.38□□□□□ -0.43
CCDC9-202ENST00000595659 HELTA6NFD8 242 aa12.37□□□□□ -0.43
CCDC9-202ENST00000595659 FABP12A6NFH5 140 aa12.37□□□□□ -0.43
CCDC9-202ENST00000595659 RD3LP0DJH9 198 aa12.37□□□□□ -0.43
CCDC9-202ENST00000595659 TNFSF8P32971 234 aa12.37□□□□□ -0.43
CCDC9-202ENST00000595659 EIF2B2P49770 351 aaKnown RBP12.37□□□□□ -0.43
CCDC9-202ENST00000595659 TMBIM6P55061 237 aa12.37□□□□□ -0.43
CCDC9-202ENST00000595659 SUPT4H1P63272 117 aaKnown RBP12.37□□□□□ -0.43
CCDC9-202ENST00000595659 LGALS9CQ6DKI2 356 aa12.37□□□□□ -0.43
CCDC9-202ENST00000595659 ETFRF1Q6IPR1 90 aa12.37□□□□□ -0.43
CCDC9-202ENST00000595659 OR51G1Q8NGK1 321 aa12.37□□□□□ -0.43
CCDC9-202ENST00000595659 IL22RA2Q969J5 263 aa12.37□□□□□ -0.43
CCDC9-202ENST00000595659 SLIRPQ9GZT3 109 aaKnown RBP12.37□□□□□ -0.43
CCDC9-202ENST00000595659 RSL24D1Q9UHA3 163 aaKnown RBP12.37□□□□□ -0.43
CCDC9-202ENST00000595659 SPP1P10451 314 aa12.36□□□□□ -0.43
CCDC9-202ENST00000595659 PSG1P11464 419 aa12.36□□□□□ -0.43
CCDC9-202ENST00000595659 CCR6P51684 374 aa12.36□□□□□ -0.43
CCDC9-202ENST00000595659 SMCO1Q147U7 214 aa12.36□□□□□ -0.43
CCDC9-202ENST00000595659 MORN3Q6PF18 240 aaPredicted RBP12.36□□□□□ -0.43
CCDC9-202ENST00000595659 GSG1LQ6UXU4 331 aa12.36□□□□□ -0.43
CCDC9-202ENST00000595659 LGI3Q8N145 548 aa12.36□□□□□ -0.43
CCDC9-202ENST00000595659 DTD1Q8TEA8 209 aa12.36□□□□□ -0.43
CCDC9-202ENST00000595659 C2CD4CQ8TF44 421 aa12.36□□□□□ -0.43
CCDC9-202ENST00000595659 SCGB3A2Q96PL1 93 aa12.36□□□□□ -0.43
CCDC9-202ENST00000595659 SOSTQ9BQB4 213 aa12.36□□□□□ -0.43
CCDC9-202ENST00000595659 RABL2AQ9UBK7 228 aaPredicted RBP12.36□□□□□ -0.43
CCDC9-202ENST00000595659 RABL2BQ9UNT1 228 aa12.36□□□□□ -0.43
CCDC9-202ENST00000595659 KMT2AQ03164 3969 aa12.35□□□□□ -0.43
CCDC9-202ENST00000595659 IGLL5B9A064 214 aa12.35□□□□□ -0.43
CCDC9-202ENST00000595659 TOMM40O96008 361 aa12.35□□□□□ -0.43
CCDC9-202ENST00000595659 AP2S1P53680 142 aaPredicted RBP12.35□□□□□ -0.43
CCDC9-202ENST00000595659 NOXA1Q86UR1 476 aa12.35□□□□□ -0.43
CCDC9-202ENST00000595659 PBDC1Q9BVG4 233 aa12.35□□□□□ -0.43
CCDC9-202ENST00000595659 HSPB7Q9UBY9 170 aa12.35□□□□□ -0.43
CCDC9-202ENST00000595659 X6R8D5 127 aa12.35□□□□□ -0.43
CCDC9-202ENST00000595659 DNAH10Q8IVF4 4471 aa12.34□□□□□ -0.43
CCDC9-202ENST00000595659 VPS13DQ5THJ4 4388 aa12.34□□□□□ -0.43
CCDC9-202ENST00000595659 ELOA3CA0A087WX78 387 aaPredicted RBP12.34□□□□□ -0.43
CCDC9-202ENST00000595659 A0A0B4J2A0 478 aa12.34□□□□□ -0.43
CCDC9-202ENST00000595659 FAM90A26D6RGX4 464 aa12.34□□□□□ -0.43
CCDC9-202ENST00000595659 H3BMQ9 156 aa12.34□□□□□ -0.43
CCDC9-202ENST00000595659 BUB3O43684 328 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms