RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 MAJINQ3KP22 176 aa13.33□□□□□ -0.28
LIG1-206ENST00000594067 TMEM177Q53S58 311 aa13.33□□□□□ -0.28
LIG1-206ENST00000594067 ATOH7Q8N100 152 aa13.33□□□□□ -0.28
LIG1-206ENST00000594067 ZNF355PQ9NSJ1 428 aa13.33□□□□□ -0.28
LIG1-206ENST00000594067 MGAQ8IWI9 3026 aa13.33□□□□□ -0.28
LIG1-206ENST00000594067 CGB1A6NKQ9 187 aa13.32□□□□□ -0.28
LIG1-206ENST00000594067 LCN12Q6JVE5 192 aa13.32□□□□□ -0.28
LIG1-206ENST00000594067 RBMXL3Q8N7X1 1067 aaKnown RBP13.32□□□□□ -0.28
LIG1-206ENST00000594067 OR10X1Q8NGY0 326 aa13.32□□□□□ -0.28
LIG1-206ENST00000594067 BORCS7Q96B45 105 aa13.32□□□□□ -0.28
LIG1-206ENST00000594067 ZNF331Q9NQX6 463 aaPredicted RBP13.32□□□□□ -0.28
LIG1-206ENST00000594067 MRPL27Q9P0M9 148 aaKnown RBP13.32□□□□□ -0.28
LIG1-206ENST00000594067 TRAV34A0A0B4J273 112 aa13.32□□□□□ -0.28
LIG1-206ENST00000594067 C17orf100A8MU93 164 aa13.32□□□□□ -0.28
LIG1-206ENST00000594067 ADIPOQQ15848 244 aa13.32□□□□□ -0.28
LIG1-206ENST00000594067 KLHDC1Q8N7A1 406 aa13.32□□□□□ -0.28
LIG1-206ENST00000594067 NUP37Q8NFH4 326 aa13.32□□□□□ -0.28
LIG1-206ENST00000594067 MEF2CQ06413 473 aaPredicted RBP13.31□□□□□ -0.28
LIG1-206ENST00000594067 TMEM108Q6UXF1 575 aa13.31□□□□□ -0.28
LIG1-206ENST00000594067 PATE2Q6UY27 113 aa13.31□□□□□ -0.28
LIG1-206ENST00000594067 SPACA3Q8IXA5 215 aa13.31□□□□□ -0.28
LIG1-206ENST00000594067 PAXXQ9BUH6 204 aa13.31□□□□□ -0.28
LIG1-206ENST00000594067 MRPL36Q9P0J6 103 aaKnown RBP13.31□□□□□ -0.28
LIG1-206ENST00000594067 ROS1P08922 2347 aa13.31□□□□□ -0.28
LIG1-206ENST00000594067 PLAUP00749 431 aa13.31□□□□□ -0.28
LIG1-206ENST00000594067 TNXAQ16473 311 aa13.31□□□□□ -0.28
LIG1-206ENST00000594067 C10orf113Q5VZT2 155 aa13.31□□□□□ -0.28
LIG1-206ENST00000594067 LYPD2Q6UXB3 125 aa13.31□□□□□ -0.28
LIG1-206ENST00000594067 TMEM167AQ8TBQ9 72 aa13.31□□□□□ -0.28
LIG1-206ENST00000594067 FAM57AQ8TBR7 257 aa13.31□□□□□ -0.28
LIG1-206ENST00000594067 WIPF2Q8TF74 440 aaPredicted RBP13.31□□□□□ -0.28
LIG1-206ENST00000594067 ZNF430Q9H8G1 570 aaPredicted RBP13.31□□□□□ -0.28
LIG1-206ENST00000594067 AMMECR1Q9Y4X0 333 aaPredicted RBP13.31□□□□□ -0.28
LIG1-206ENST00000594067 A0A1W2PN81 502 aa13.3□□□□□ -0.28
LIG1-206ENST00000594067 TSPOP30536 169 aa13.3□□□□□ -0.28
LIG1-206ENST00000594067 GDF5OSQ5U4N7 250 aa13.3□□□□□ -0.28
LIG1-206ENST00000594067 OR4C13Q8NGP0 309 aa13.3□□□□□ -0.28
LIG1-206ENST00000594067 CCL17Q92583 94 aa13.3□□□□□ -0.28
LIG1-206ENST00000594067 MBD6Q96DN6 1003 aa13.3□□□□□ -0.28
LIG1-206ENST00000594067 CEP250Q9BV73 2442 aa13.3□□□□□ -0.28
LIG1-206ENST00000594067 IGKV1D-37A0A075B6S9 117 aa13.29□□□□□ -0.28
LIG1-206ENST00000594067 PPIAL4EA0A075B759 164 aa13.29□□□□□ -0.28
LIG1-206ENST00000594067 PPIAL4DF5H284 164 aa13.29□□□□□ -0.28
LIG1-206ENST00000594067 CCL25O15444 150 aa13.29□□□□□ -0.28
LIG1-206ENST00000594067 PPIAL4FP0DN26 164 aa13.29□□□□□ -0.28
LIG1-206ENST00000594067 C21orf62-AS1Q17RA5 79 aa13.29□□□□□ -0.28
LIG1-206ENST00000594067 LHFPL4Q7Z7J7 247 aa13.29□□□□□ -0.28
LIG1-206ENST00000594067 ZNF329Q86UD4 541 aa13.29□□□□□ -0.28
LIG1-206ENST00000594067 SAP30LQ9HAJ7 183 aa13.29□□□□□ -0.28
LIG1-206ENST00000594067 TPSG1Q9NRR2 321 aa13.29□□□□□ -0.28
LIG1-206ENST00000594067 PMCHL1Q16048 86 aa13.29□□□□□ -0.28
LIG1-206ENST00000594067 RASL11AQ6T310 242 aa13.29□□□□□ -0.28
LIG1-206ENST00000594067 ORAOV1Q8WV07 137 aa13.29□□□□□ -0.28
LIG1-206ENST00000594067 RITA1Q96K30 269 aa13.29□□□□□ -0.28
LIG1-206ENST00000594067 MRPS16Q9Y3D3 137 aaKnown RBP13.29□□□□□ -0.28
LIG1-206ENST00000594067 TCRBV4S1A1TA0A5B7 111 aa13.28□□□□□ -0.28
LIG1-206ENST00000594067 C20orf202A1L168 122 aa13.28□□□□□ -0.28
LIG1-206ENST00000594067 SLC25A17O43808 307 aa13.28□□□□□ -0.28
LIG1-206ENST00000594067 IGLV2-23P01705 113 aa13.28□□□□□ -0.28
LIG1-206ENST00000594067 MFAP2P55001 183 aa13.28□□□□□ -0.28
LIG1-206ENST00000594067 BSPH1Q075Z2 132 aa13.28□□□□□ -0.28
LIG1-206ENST00000594067 PRR27Q6MZM9 219 aa13.28□□□□□ -0.28
LIG1-206ENST00000594067 EBLN2Q6P2I7 272 aa13.28□□□□□ -0.28
LIG1-206ENST00000594067 OR1L4Q8NGR5 311 aa13.28□□□□□ -0.28
LIG1-206ENST00000594067 MAP1BP46821 2468 aaKnown RBP13.28□□□□□ -0.28
LIG1-206ENST00000594067 TTC28Q96AY4 2481 aa13.28□□□□□ -0.28
LIG1-206ENST00000594067 TMEM178BH3BS89 294 aa13.28□□□□□ -0.28
LIG1-206ENST00000594067 PEX7O00628 323 aa13.28□□□□□ -0.28
LIG1-206ENST00000594067 PCP4P48539 62 aa13.28□□□□□ -0.28
LIG1-206ENST00000594067 HINT1P49773 126 aaPredicted RBP13.28□□□□□ -0.28
LIG1-206ENST00000594067 GNG5P63218 68 aa13.28□□□□□ -0.28
LIG1-206ENST00000594067 RUSC1-AS1Q66K80 236 aa13.28□□□□□ -0.28
LIG1-206ENST00000594067 IGF2-ASQ6U949 168 aa13.28□□□□□ -0.28
LIG1-206ENST00000594067 PDPNQ86YL7 162 aa13.28□□□□□ -0.28
LIG1-206ENST00000594067 NUP35Q8NFH5 326 aa13.28□□□□□ -0.28
LIG1-206ENST00000594067 VSTM2AQ8TAG5 236 aa13.28□□□□□ -0.28
LIG1-206ENST00000594067 SH3BGRL2Q9UJC5 107 aa13.28□□□□□ -0.28
LIG1-206ENST00000594067 IGHV3-72A0A0B4J1Y9 119 aa13.27□□□□□ -0.28
LIG1-206ENST00000594067 A0A0G2JNJ9 132 aa13.27□□□□□ -0.28
LIG1-206ENST00000594067 INS-IGF2F8WCM5 200 aa13.27□□□□□ -0.28
LIG1-206ENST00000594067 C16orf97H3BN30 126 aa13.27□□□□□ -0.28
LIG1-206ENST00000594067 Q6ZVH6 145 aa13.27□□□□□ -0.28
LIG1-206ENST00000594067 FAM231DQ6ZW35 169 aa13.27□□□□□ -0.28
LIG1-206ENST00000594067 NUDT10Q8NFP7 164 aa13.27□□□□□ -0.28
LIG1-206ENST00000594067 NUDT11Q96G61 164 aa13.27□□□□□ -0.28
LIG1-206ENST00000594067 SGK494Q96LW2 274 aa13.27□□□□□ -0.28
LIG1-206ENST00000594067 Q9UFV3 132 aa13.27□□□□□ -0.28
LIG1-206ENST00000594067 NAV3Q8IVL0 2385 aa13.27□□□□□ -0.29
LIG1-206ENST00000594067 NDUFB3O43676 98 aa13.27□□□□□ -0.29
LIG1-206ENST00000594067 HSBP1O75506 76 aa13.27□□□□□ -0.29
LIG1-206ENST00000594067 MOSP00540 346 aa13.27□□□□□ -0.29
LIG1-206ENST00000594067 SUB1P53999 127 aaKnown RBP eCLIP13.27□□□□□ -0.291e-16■■■■■ 45.6
LIG1-206ENST00000594067 BPIFB3P59826 476 aa13.27□□□□□ -0.29
LIG1-206ENST00000594067 LINC00305Q7Z4B0 112 aa13.27□□□□□ -0.29
LIG1-206ENST00000594067 FXYD5Q96DB9 178 aa13.27□□□□□ -0.29
LIG1-206ENST00000594067 WASHC3Q9Y3C0 194 aa13.27□□□□□ -0.29
LIG1-206ENST00000594067 IGHV2-26A0A0B4J1V2 119 aa13.26□□□□□ -0.29
LIG1-206ENST00000594067 A0A1W2PPI3 338 aa13.26□□□□□ -0.29
LIG1-206ENST00000594067 FAM181BA6NEQ2 426 aa13.26□□□□□ -0.29
LIG1-206ENST00000594067 KLF5Q13887 457 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms