RNA–Protein interactions for RNA: ENST00000593257.1

TRMT1-223, Transcript of tRNA methyltransferase 1, human

TSL 4

Gene TRMT1, Length 408 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRMT1-223	ENST00000593257	GATA2	P23769	480 aa	Predicted RBP	13.22	□□□□□ -0.29
TRMT1-223	ENST00000593257	GCHFR	P30047	84 aa		13.22	□□□□□ -0.29
TRMT1-223	ENST00000593257	CRIP2	P52943	208 aa	Predicted RBP	13.22	□□□□□ -0.29
TRMT1-223	ENST00000593257	MFAP4	P55083	255 aa		13.22	□□□□□ -0.29
TRMT1-223	ENST00000593257	MEF2B	Q02080	365 aa	Predicted RBP	13.22	□□□□□ -0.29
TRMT1-223	ENST00000593257	ZNF90	Q03938	601 aa		13.22	□□□□□ -0.29
TRMT1-223	ENST00000593257	AKIRIN2	Q53H80	203 aa		13.22	□□□□□ -0.29
TRMT1-223	ENST00000593257	C10orf113	Q5VZT2	155 aa		13.22	□□□□□ -0.29
TRMT1-223	ENST00000593257	SPNS3	Q6ZMD2	512 aa		13.22	□□□□□ -0.29
TRMT1-223	ENST00000593257	PQLC2	Q6ZP29	291 aa		13.22	□□□□□ -0.29
TRMT1-223	ENST00000593257	C9orf139	Q6ZV77	190 aa		13.22	□□□□□ -0.29
TRMT1-223	ENST00000593257	SUN5	Q8TC36	379 aa		13.22	□□□□□ -0.29
TRMT1-223	ENST00000593257	NKX6-2	Q9C056	277 aa	Predicted RBP	13.22	□□□□□ -0.29
TRMT1-223	ENST00000593257	TMPRSS5	Q9H3S3	457 aa		13.22	□□□□□ -0.29
TRMT1-223	ENST00000593257	TMEM167B	Q9NRX6	74 aa		13.22	□□□□□ -0.29
TRMT1-223	ENST00000593257	PLXNB1	O43157	2135 aa		13.21	□□□□□ -0.29
TRMT1-223	ENST00000593257	PSMB11	A5LHX3	300 aa		13.21	□□□□□ -0.29
TRMT1-223	ENST00000593257	C8orf88	P0DMB2	117 aa		13.21	□□□□□ -0.29
TRMT1-223	ENST00000593257	PLP1	P60201	277 aa		13.21	□□□□□ -0.29
TRMT1-223	ENST00000593257	MIR17HG	Q75NE6	70 aa		13.21	□□□□□ -0.29
TRMT1-223	ENST00000593257	OR5T1	Q8NG75	326 aa		13.21	□□□□□ -0.29
TRMT1-223	ENST00000593257	VN1R17P	Q8TDU5	208 aa		13.21	□□□□□ -0.29
TRMT1-223	ENST00000593257	TXN2	Q99757	166 aa		13.21	□□□□□ -0.29
TRMT1-223	ENST00000593257	TMUB1	Q9BVT8	246 aa		13.21	□□□□□ -0.29
TRMT1-223	ENST00000593257	ARL2-SNX15	V9GYD0	113 aa		13.21	□□□□□ -0.29
TRMT1-223	ENST00000593257	TMEM250	H0YL14	139 aa		13.2	□□□□□ -0.3
TRMT1-223	ENST00000593257	PAGE4	O60829	102 aa		13.2	□□□□□ -0.3
TRMT1-223	ENST00000593257	HYPM	O75409	117 aa		13.2	□□□□□ -0.3
TRMT1-223	ENST00000593257	ECSCR	Q19T08	205 aa		13.2	□□□□□ -0.3
TRMT1-223	ENST00000593257	SPATA31B1P	Q5VZV4	182 aa		13.2	□□□□□ -0.3
TRMT1-223	ENST00000593257	CYB561D1	Q8N8Q1	229 aa		13.2	□□□□□ -0.3
TRMT1-223	ENST00000593257	CLRN3	Q8NCR9	226 aa		13.2	□□□□□ -0.3
TRMT1-223	ENST00000593257	OR5R1	Q8NH85	324 aa		13.2	□□□□□ -0.3
TRMT1-223	ENST00000593257	TMEM37	Q8WXS4	190 aa		13.2	□□□□□ -0.3
TRMT1-223	ENST00000593257	FOXC2	Q99958	501 aa		13.2	□□□□□ -0.3
TRMT1-223	ENST00000593257	NAV3	Q8IVL0	2385 aa		13.2	□□□□□ -0.3
TRMT1-223	ENST00000593257	SCO1	O75880	301 aa		13.19	□□□□□ -0.3
TRMT1-223	ENST00000593257	AMY1A	P04745	511 aa		13.19	□□□□□ -0.3
TRMT1-223	ENST00000593257	LY6E	Q16553	131 aa		13.19	□□□□□ -0.3
TRMT1-223	ENST00000593257	DEFB112	Q30KQ8	113 aa		13.19	□□□□□ -0.3
TRMT1-223	ENST00000593257	C21orf62	Q9NYP8	219 aa		13.19	□□□□□ -0.3
TRMT1-223	ENST00000593257	FBXL7	Q9UJT9	491 aa		13.19	□□□□□ -0.3
TRMT1-223	ENST00000593257	SOX21	Q9Y651	276 aa	Predicted RBP	13.19	□□□□□ -0.3
TRMT1-223	ENST00000593257	ANKRD17	O75179	2603 aa	Known RBP	13.19	□□□□□ -0.3
TRMT1-223	ENST00000593257		F6UZH7	168 aa		13.18	□□□□□ -0.3
TRMT1-223	ENST00000593257	PDE6D	O43924	150 aa		13.18	□□□□□ -0.3
TRMT1-223	ENST00000593257	GNG7	O60262	68 aa		13.18	□□□□□ -0.3
TRMT1-223	ENST00000593257	OR2J3	O76001	311 aa		13.18	□□□□□ -0.3
TRMT1-223	ENST00000593257	NDUFB8	O95169	186 aa		13.18	□□□□□ -0.3
TRMT1-223	ENST00000593257	RD3L	P0DJH9	198 aa		13.18	□□□□□ -0.3
TRMT1-223	ENST00000593257	FCGR2B	P31994	310 aa	Predicted RBP	13.18	□□□□□ -0.3
TRMT1-223	ENST00000593257	CEBPG	P53567	150 aa		13.18	□□□□□ -0.3
TRMT1-223	ENST00000593257	CD81	P60033	236 aa		13.18	□□□□□ -0.3
TRMT1-223	ENST00000593257	YPEL3	P61236	119 aa	Predicted RBP	13.18	□□□□□ -0.3
TRMT1-223	ENST00000593257	TIGIT	Q495A1	244 aa		13.18	□□□□□ -0.3
TRMT1-223	ENST00000593257	FAM74A3	Q4VXF1	159 aa		13.18	□□□□□ -0.3
TRMT1-223	ENST00000593257	ATRAID	Q6UW56	229 aa		13.18	□□□□□ -0.3
TRMT1-223	ENST00000593257	S100A7A	Q86SG5	101 aa		13.18	□□□□□ -0.3
TRMT1-223	ENST00000593257	STXBP6	Q8NFX7	210 aa		13.18	□□□□□ -0.3
TRMT1-223	ENST00000593257	GAR1	Q9NY12	217 aa	Known RBP	13.18	□□□□□ -0.3
TRMT1-223	ENST00000593257	DOK5	Q9P104	306 aa		13.18	□□□□□ -0.3
TRMT1-223	ENST00000593257	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	13.17	□□□□□ -0.3	5e-6	■■■■■ 27.5
TRMT1-223	ENST00000593257	TRAV41	A0A0B4J266	112 aa		13.17	□□□□□ -0.3
TRMT1-223	ENST00000593257	C11orf94	C9JXX5	98 aa		13.17	□□□□□ -0.3
TRMT1-223	ENST00000593257	OR7C2	O60412	319 aa		13.17	□□□□□ -0.3
TRMT1-223	ENST00000593257	TOMM40	O96008	361 aa		13.17	□□□□□ -0.3
TRMT1-223	ENST00000593257	IGKV1-17	P01599	117 aa		13.17	□□□□□ -0.3
TRMT1-223	ENST00000593257	IGF1	P05019	195 aa		13.17	□□□□□ -0.3
TRMT1-223	ENST00000593257		Q56UQ5	140 aa		13.17	□□□□□ -0.3
TRMT1-223	ENST00000593257	CST9LP1	Q5W188	147 aa		13.17	□□□□□ -0.3
TRMT1-223	ENST00000593257	NECAP1	Q8NC96	275 aa		13.17	□□□□□ -0.3
TRMT1-223	ENST00000593257	OR1B1	Q8NGR6	318 aa		13.17	□□□□□ -0.3
TRMT1-223	ENST00000593257	OR4F5	Q8NH21	305 aa		13.17	□□□□□ -0.3
TRMT1-223	ENST00000593257	OR4F4	Q96R69	305 aa		13.17	□□□□□ -0.3
TRMT1-223	ENST00000593257	NIPSNAP3B	Q9BS92	247 aa		13.17	□□□□□ -0.3
TRMT1-223	ENST00000593257	FBN2	P35556	2912 aa		13.17	□□□□□ -0.3
TRMT1-223	ENST00000593257	UTP20	O75691	2785 aa	Known RBP	13.17	□□□□□ -0.3
TRMT1-223	ENST00000593257	TRBV9	A0A0B4J1U6	114 aa		13.16	□□□□□ -0.3
TRMT1-223	ENST00000593257	IGHG2	P01859	326 aa		13.16	□□□□□ -0.3
TRMT1-223	ENST00000593257	PSG1	P11464	419 aa		13.16	□□□□□ -0.3
TRMT1-223	ENST00000593257	ORM2	P19652	201 aa		13.16	□□□□□ -0.3
TRMT1-223	ENST00000593257	RHEB	Q15382	184 aa		13.16	□□□□□ -0.3
TRMT1-223	ENST00000593257	C19orf54	Q5BKX5	351 aa		13.16	□□□□□ -0.3
TRMT1-223	ENST00000593257	C9orf152	Q5JTZ5	239 aa		13.16	□□□□□ -0.3
TRMT1-223	ENST00000593257	FAM90A2P	Q658T7	463 aa		13.16	□□□□□ -0.3
TRMT1-223	ENST00000593257	PATE2	Q6UY27	113 aa		13.16	□□□□□ -0.3
TRMT1-223	ENST00000593257	WFDC11	Q8NEX6	87 aa		13.16	□□□□□ -0.3
TRMT1-223	ENST00000593257	OR51G1	Q8NGK1	321 aa		13.16	□□□□□ -0.3
TRMT1-223	ENST00000593257	GSX1	Q9H4S2	264 aa	Predicted RBP	13.16	□□□□□ -0.3
TRMT1-223	ENST00000593257	ZNF355P	Q9NSJ1	428 aa		13.16	□□□□□ -0.3
TRMT1-223	ENST00000593257	HIGD1A	Q9Y241	93 aa		13.16	□□□□□ -0.3
TRMT1-223	ENST00000593257	CR1	P17927	2039 aa		13.16	□□□□□ -0.3
TRMT1-223	ENST00000593257	DOPEY2	Q9Y3R5	2298 aa		13.16	□□□□□ -0.3
TRMT1-223	ENST00000593257	PTPN13	Q12923	2485 aa		13.16	□□□□□ -0.3
TRMT1-223	ENST00000593257	GCN1	Q92616	2671 aa	Known RBP	13.16	□□□□□ -0.3
TRMT1-223	ENST00000593257	MDFIC2	A0A1B0GVS7	189 aa		13.15	□□□□□ -0.3
TRMT1-223	ENST00000593257	SH2D7	A6NKC9	451 aa	Predicted RBP	13.15	□□□□□ -0.3
TRMT1-223	ENST00000593257		H3BQ15	152 aa		13.15	□□□□□ -0.3
TRMT1-223	ENST00000593257		H3BUA1	57 aa		13.15	□□□□□ -0.3
TRMT1-223	ENST00000593257		M0R036	132 aa		13.15	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms