RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 LOC389332A0A1B0GUA5 103 aa3.35□□□□□ -1.87
SMAD4-216ENST00000593223 A8MT66 165 aa3.35□□□□□ -1.87
SMAD4-216ENST00000593223 K7N7A8 449 aa3.35□□□□□ -1.87
SMAD4-216ENST00000593223 CORTO00230 105 aa3.35□□□□□ -1.87
SMAD4-216ENST00000593223 IFNA7P01567 189 aa3.35□□□□□ -1.87
SMAD4-216ENST00000593223 IGHV3-23P01764 117 aa3.35□□□□□ -1.87
SMAD4-216ENST00000593223 GYPCP04921 128 aa3.35□□□□□ -1.87
SMAD4-216ENST00000593223 HLA-DQB2P05538 268 aa3.35□□□□□ -1.87
SMAD4-216ENST00000593223 CSN2P05814 226 aa3.35□□□□□ -1.87
SMAD4-216ENST00000593223 MUC1P15941 1255 aaPredicted RBP3.35□□□□□ -1.87
SMAD4-216ENST00000593223 RPL7P18124 248 aaKnown RBP3.35□□□□□ -1.87
SMAD4-216ENST00000593223 RPS3P23396 243 aaKnown RBP eCLIP3.35□□□□□ -1.87
SMAD4-216ENST00000593223 AQP1P29972 269 aa3.35□□□□□ -1.87
SMAD4-216ENST00000593223 OR10J1P30954 320 aa3.35□□□□□ -1.87
SMAD4-216ENST00000593223 NCBP2P52298 156 aaKnown RBP eCLIP3.35□□□□□ -1.87
SMAD4-216ENST00000593223 TAS2R19P59542 299 aa3.35□□□□□ -1.87
SMAD4-216ENST00000593223 MAXP61244 160 aa3.35□□□□□ -1.87
SMAD4-216ENST00000593223 CAV1Q03135 178 aa3.35□□□□□ -1.87
SMAD4-216ENST00000593223 DAZ2Q13117 558 aaKnown RBP3.35□□□□□ -1.87
SMAD4-216ENST00000593223 KIAA0087Q14695 138 aa3.35□□□□□ -1.87
SMAD4-216ENST00000593223 NEDD8Q15843 81 aa3.35□□□□□ -1.87
SMAD4-216ENST00000593223 PRSS54Q6PEW0 395 aa3.35□□□□□ -1.87
SMAD4-216ENST00000593223 IL34Q6ZMJ4 242 aa3.35□□□□□ -1.87
SMAD4-216ENST00000593223 DAZ4Q86SG3 579 aaKnown RBP3.35□□□□□ -1.87
SMAD4-216ENST00000593223 CTAGE3PQ8IX95 158 aa3.35□□□□□ -1.87
SMAD4-216ENST00000593223 NKAPP1Q8N9T2 125 aa3.35□□□□□ -1.87
SMAD4-216ENST00000593223 OR2G3Q8NGZ4 309 aa3.35□□□□□ -1.87
SMAD4-216ENST00000593223 RXFP4Q8TDU9 374 aa3.35□□□□□ -1.87
SMAD4-216ENST00000593223 TMEM159Q96B96 161 aa3.35□□□□□ -1.87
SMAD4-216ENST00000593223 ISOC1Q96CN7 298 aa3.35□□□□□ -1.87
SMAD4-216ENST00000593223 CMBLQ96DG6 245 aa3.35□□□□□ -1.87
SMAD4-216ENST00000593223 TP53RKQ96S44 253 aa3.35□□□□□ -1.87
SMAD4-216ENST00000593223 SMR3AQ99954 134 aa3.35□□□□□ -1.87
SMAD4-216ENST00000593223 COMMD5Q9GZQ3 224 aa3.35□□□□□ -1.87
SMAD4-216ENST00000593223 PARP12Q9H0J9 701 aaKnown RBP3.35□□□□□ -1.87
SMAD4-216ENST00000593223 OR2D2Q9H210 308 aa3.35□□□□□ -1.87
SMAD4-216ENST00000593223 EDA2RQ9HAV5 297 aa3.35□□□□□ -1.87
SMAD4-216ENST00000593223 DAZ1Q9NQZ3 744 aaKnown RBP3.35□□□□□ -1.87
SMAD4-216ENST00000593223 DAZ3Q9NR90 486 aaKnown RBP3.35□□□□□ -1.87
SMAD4-216ENST00000593223 FAM49BQ9NUQ9 324 aa3.35□□□□□ -1.87
SMAD4-216ENST00000593223 RBFOX1Q9NWB1 397 aaKnown RBP3.35□□□□□ -1.87
SMAD4-216ENST00000593223 MRPL16Q9NX20 251 aaKnown RBP3.35□□□□□ -1.87
SMAD4-216ENST00000593223 LINC00527Q9UJ94 153 aa3.35□□□□□ -1.87
SMAD4-216ENST00000593223 MCTS1Q9ULC4 181 aaKnown RBP3.35□□□□□ -1.87
SMAD4-216ENST00000593223 ZFP30Q9Y2G7 519 aa3.35□□□□□ -1.87
SMAD4-216ENST00000593223 LAMTOR2Q9Y2Q5 125 aa3.35□□□□□ -1.87
SMAD4-216ENST00000593223 INSIG2Q9Y5U4 225 aa3.35□□□□□ -1.87
SMAD4-216ENST00000593223 ESPL1Q14674 2120 aa3.34□□□□□ -1.87
SMAD4-216ENST00000593223 TRBV19A0A075B6N1 114 aa3.34□□□□□ -1.87
SMAD4-216ENST00000593223 IGKV6D-21A0A0A0MT36 114 aa3.34□□□□□ -1.87
SMAD4-216ENST00000593223 IGHV6-1A0A0B4J1U7 121 aa3.34□□□□□ -1.87
SMAD4-216ENST00000593223 TMEM269A0A1B0GVZ9 245 aa3.34□□□□□ -1.87
SMAD4-216ENST00000593223 DUXBA0A1W2PPF3 345 aa3.34□□□□□ -1.87
SMAD4-216ENST00000593223 C5orf63A6NC05 138 aa3.34□□□□□ -1.87
SMAD4-216ENST00000593223 TRAF3IP2O43734 574 aaPredicted RBP3.34□□□□□ -1.87
SMAD4-216ENST00000593223 SLC37A4O43826 429 aa3.34□□□□□ -1.87
SMAD4-216ENST00000593223 TBL1XO60907 577 aa3.34□□□□□ -1.87
SMAD4-216ENST00000593223 SS18L1O75177 396 aaPredicted RBP3.34□□□□□ -1.87
SMAD4-216ENST00000593223 ZNF682O95780 498 aa3.34□□□□□ -1.87
SMAD4-216ENST00000593223 NRASP01111 189 aa3.34□□□□□ -1.87
SMAD4-216ENST00000593223 SOD3P08294 240 aa3.34□□□□□ -1.87
SMAD4-216ENST00000593223 OR12D1P0DN82 309 aa3.34□□□□□ -1.87
SMAD4-216ENST00000593223 IGHV3-43DP0DP04 118 aa3.34□□□□□ -1.87
SMAD4-216ENST00000593223 IL1RNP18510 177 aa3.34□□□□□ -1.87
SMAD4-216ENST00000593223 CCL1P22362 96 aa3.34□□□□□ -1.87
SMAD4-216ENST00000593223 PPIBP23284 216 aaKnown RBP3.34□□□□□ -1.87
SMAD4-216ENST00000593223 KDELR1P24390 212 aa3.34□□□□□ -1.87
SMAD4-216ENST00000593223 EIF2B2P49770 351 aaKnown RBP3.34□□□□□ -1.87
SMAD4-216ENST00000593223 LHX2P50458 406 aa3.34□□□□□ -1.87
SMAD4-216ENST00000593223 GRB2P62993 217 aaKnown RBP3.34□□□□□ -1.87
SMAD4-216ENST00000593223 HIST1H1AQ02539 215 aaPredicted RBP3.34□□□□□ -1.87
SMAD4-216ENST00000593223 MEF2CQ06413 473 aaPredicted RBP3.34□□□□□ -1.87
SMAD4-216ENST00000593223 ADIGQ0VDE8 80 aa3.34□□□□□ -1.87
SMAD4-216ENST00000593223 FABP9Q0Z7S8 132 aa3.34□□□□□ -1.87
SMAD4-216ENST00000593223 ERCC8Q13216 396 aa3.34□□□□□ -1.87
SMAD4-216ENST00000593223 BTN1A1Q13410 526 aa3.34□□□□□ -1.87
SMAD4-216ENST00000593223 RHEBQ15382 184 aa3.34□□□□□ -1.87
SMAD4-216ENST00000593223 C6orf99Q4VX62 202 aa3.34□□□□□ -1.87
SMAD4-216ENST00000593223 COA6Q5JTJ3 125 aaKnown RBP3.34□□□□□ -1.87
SMAD4-216ENST00000593223 GLYATQ6IB77 296 aa3.34□□□□□ -1.87
SMAD4-216ENST00000593223 KRTAP5-2Q701N4 177 aa3.34□□□□□ -1.87
SMAD4-216ENST00000593223 SGPP2Q8IWX5 399 aa3.34□□□□□ -1.87
SMAD4-216ENST00000593223 KRTCAP2Q8N6L1 136 aa3.34□□□□□ -1.87
SMAD4-216ENST00000593223 ZIC4Q8N9L1 334 aa3.34□□□□□ -1.87
SMAD4-216ENST00000593223 OR13C8Q8NGS7 320 aa3.34□□□□□ -1.87
SMAD4-216ENST00000593223 ORAOV1Q8WV07 137 aa3.34□□□□□ -1.87
SMAD4-216ENST00000593223 NEURL3Q96EH8 262 aa3.34□□□□□ -1.87
SMAD4-216ENST00000593223 FCRL1Q96LA6 429 aa3.34□□□□□ -1.87
SMAD4-216ENST00000593223 IMMP1LQ96LU5 166 aa3.34□□□□□ -1.87
SMAD4-216ENST00000593223 NDFIP1Q9BT67 221 aa3.34□□□□□ -1.87
SMAD4-216ENST00000593223 MRPL20Q9BYC9 149 aaKnown RBP3.34□□□□□ -1.87
SMAD4-216ENST00000593223 OR2H1Q9GZK4 316 aa3.34□□□□□ -1.87
SMAD4-216ENST00000593223 TAF9BQ9HBM6 251 aa3.34□□□□□ -1.87
SMAD4-216ENST00000593223 ZNF331Q9NQX6 463 aaPredicted RBP3.34□□□□□ -1.87
SMAD4-216ENST00000593223 PCYT1BQ9Y5K3 369 aaPredicted RBP3.34□□□□□ -1.87
SMAD4-216ENST00000593223 PXMP4Q9Y6I8 212 aa3.34□□□□□ -1.87
SMAD4-216ENST00000593223 DOCK5Q9H7D0 1870 aa3.34□□□□□ -1.87
SMAD4-216ENST00000593223 KNL1Q8NG31 2342 aa3.33□□□□□ -1.88
SMAD4-216ENST00000593223 BAZ2AQ9UIF9 1905 aaKnown RBP3.33□□□□□ -1.88
SMAD4-216ENST00000593223 IGHV1OR15-9A0A0B4J2B8 117 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms