RNA–Protein interactions for RNA: ENST00000591955.1

NPC1-213, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 561 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-213ENST00000591955 EFNB3Q15768 340 aa4.84□□□□□ -1.63
NPC1-213ENST00000591955 Q5PR19 223 aa4.84□□□□□ -1.63
NPC1-213ENST00000591955 RBPMS2Q6ZRY4 209 aaKnown RBP4.84□□□□□ -1.63
NPC1-213ENST00000591955 C2orf91Q6ZV80 131 aa4.84□□□□□ -1.63
NPC1-213ENST00000591955 RPRMLQ8N4K4 120 aa4.84□□□□□ -1.63
NPC1-213ENST00000591955 SPEM1Q8N4L4 309 aa4.84□□□□□ -1.63
NPC1-213ENST00000591955 DRAM1Q8N682 238 aa4.84□□□□□ -1.63
NPC1-213ENST00000591955 Q8N7P7 452 aa4.84□□□□□ -1.63
NPC1-213ENST00000591955 GATD1Q8NB37 220 aa4.84□□□□□ -1.63
NPC1-213ENST00000591955 NFAM1Q8NET5 270 aaPredicted RBP4.84□□□□□ -1.63
NPC1-213ENST00000591955 OR1L4Q8NGR5 311 aa4.84□□□□□ -1.63
NPC1-213ENST00000591955 GALMQ96C23 342 aa4.84□□□□□ -1.63
NPC1-213ENST00000591955 IGF2BP2-AS1Q96M15 143 aa4.84□□□□□ -1.63
NPC1-213ENST00000591955 WDR54Q9H977 334 aa4.84□□□□□ -1.63
NPC1-213ENST00000591955 ENY2Q9NPA8 101 aa4.84□□□□□ -1.63
NPC1-213ENST00000591955 SPANXB1Q9NS25 103 aaPredicted RBP4.84□□□□□ -1.63
NPC1-213ENST00000591955 IDI2-AS1Q9NZ38 188 aa4.84□□□□□ -1.63
NPC1-213ENST00000591955 TSSC4Q9Y5U2 329 aaPredicted RBP4.84□□□□□ -1.63
NPC1-213ENST00000591955 SNRNP200O75643 2136 aaKnown RBP4.84□□□□□ -1.64
NPC1-213ENST00000591955 IGSF10Q6WRI0 2623 aa4.83□□□□□ -1.64
NPC1-213ENST00000591955 SDK1Q7Z5N4 2213 aa4.83□□□□□ -1.64
NPC1-213ENST00000591955 SHANK1Q9Y566 2161 aa4.83□□□□□ -1.64
NPC1-213ENST00000591955 A0A087X0K7 114 aa4.83□□□□□ -1.64
NPC1-213ENST00000591955 H3BMG7 143 aa4.83□□□□□ -1.64
NPC1-213ENST00000591955 H3BML4 177 aa4.83□□□□□ -1.64
NPC1-213ENST00000591955 J3QT63 122 aa4.83□□□□□ -1.64
NPC1-213ENST00000591955 CHEK1O14757 476 aa4.83□□□□□ -1.64
NPC1-213ENST00000591955 P04436 131 aa4.83□□□□□ -1.64
NPC1-213ENST00000591955 C8orf88P0DMB2 117 aa4.83□□□□□ -1.64
NPC1-213ENST00000591955 MGST1P10620 155 aaKnown RBP4.83□□□□□ -1.64
NPC1-213ENST00000591955 ZNF16P17020 682 aaPredicted RBP4.83□□□□□ -1.64
NPC1-213ENST00000591955 BCL3P20749 454 aa4.83□□□□□ -1.64
NPC1-213ENST00000591955 OTX2P32243 289 aa4.83□□□□□ -1.64
NPC1-213ENST00000591955 RPL30P62888 115 aaKnown RBP4.83□□□□□ -1.64
NPC1-213ENST00000591955 RSPO1Q2MKA7 263 aaPredicted RBP4.83□□□□□ -1.64
NPC1-213ENST00000591955 TMEM30BQ3MIR4 351 aa4.83□□□□□ -1.64
NPC1-213ENST00000591955 FAM120AOSQ5T036 256 aa4.83□□□□□ -1.64
NPC1-213ENST00000591955 PRAMEF5Q5TYX0 476 aa4.83□□□□□ -1.64
NPC1-213ENST00000591955 PRAMEF6Q5VXH4 476 aa4.83□□□□□ -1.64
NPC1-213ENST00000591955 CARD17Q5XLA6 110 aa4.83□□□□□ -1.64
NPC1-213ENST00000591955 SLC35E4Q6ICL7 350 aa4.83□□□□□ -1.64
NPC1-213ENST00000591955 ZNF497Q6ZNH5 498 aa4.83□□□□□ -1.64
NPC1-213ENST00000591955 Q6ZS52 159 aa4.83□□□□□ -1.64
NPC1-213ENST00000591955 Q6ZVH6 145 aa4.83□□□□□ -1.64
NPC1-213ENST00000591955 PRR22Q8IZ63 422 aa4.83□□□□□ -1.64
NPC1-213ENST00000591955 STPG3Q8N7X2 389 aa4.83□□□□□ -1.64
NPC1-213ENST00000591955 NUP35Q8NFH5 326 aa4.83□□□□□ -1.64
NPC1-213ENST00000591955 SLC37A2Q8TED4 501 aa4.83□□□□□ -1.64
NPC1-213ENST00000591955 LRRC29Q8WV35 223 aa4.83□□□□□ -1.64
NPC1-213ENST00000591955 GTSF1Q8WW33 167 aa4.83□□□□□ -1.64
NPC1-213ENST00000591955 PIGCQ92535 297 aa4.83□□□□□ -1.64
NPC1-213ENST00000591955 ARPC1AQ92747 370 aa4.83□□□□□ -1.64
NPC1-213ENST00000591955 ZNF524Q96C55 264 aa4.83□□□□□ -1.64
NPC1-213ENST00000591955 COQ2Q96H96 371 aa4.83□□□□□ -1.64
NPC1-213ENST00000591955 RTL8AQ9BWD3 113 aa4.83□□□□□ -1.64
NPC1-213ENST00000591955 SCNM1Q9BWG6 230 aa4.83□□□□□ -1.64
NPC1-213ENST00000591955 PLA2G2FQ9BZM2 168 aa4.83□□□□□ -1.64
NPC1-213ENST00000591955 ARRDC1-AS1Q9H2J1 176 aa4.83□□□□□ -1.64
NPC1-213ENST00000591955 HCFC1R1Q9NWW0 138 aa4.83□□□□□ -1.64
NPC1-213ENST00000591955 IL36RNQ9UBH0 155 aa4.83□□□□□ -1.64
NPC1-213ENST00000591955 RARRES3Q9UL19 164 aa4.83□□□□□ -1.64
NPC1-213ENST00000591955 SPAG17Q6Q759 2223 aa4.82□□□□□ -1.64
NPC1-213ENST00000591955 KIAA2026Q5HYC2 2103 aa4.82□□□□□ -1.64
NPC1-213ENST00000591955 LOC102724200A0A096LPH7 203 aaPredicted RBP4.82□□□□□ -1.64
NPC1-213ENST00000591955 TRBV6-1A0A0K0K1D8 114 aa4.82□□□□□ -1.64
NPC1-213ENST00000591955 KBTBD11-OT1A0A1B0GTJ5 212 aa4.82□□□□□ -1.64
NPC1-213ENST00000591955 A0A1W2PRD5 423 aa4.82□□□□□ -1.64
NPC1-213ENST00000591955 A0A1W2PRF3 423 aa4.82□□□□□ -1.64
NPC1-213ENST00000591955 A0A1W2PRM7 423 aa4.82□□□□□ -1.64
NPC1-213ENST00000591955 TMEM30CPA0ZSE6 113 aa4.82□□□□□ -1.64
NPC1-213ENST00000591955 TMEM8BA6NDV4 472 aa4.82□□□□□ -1.64
NPC1-213ENST00000591955 OOEPA6NGQ2 149 aa4.82□□□□□ -1.64
NPC1-213ENST00000591955 M0QXV9 152 aa4.82□□□□□ -1.64
NPC1-213ENST00000591955 ZG16O60844 167 aa4.82□□□□□ -1.64
NPC1-213ENST00000591955 KLF7O75840 302 aaPredicted RBP4.82□□□□□ -1.64
NPC1-213ENST00000591955 CA1P00915 261 aaPredicted RBP4.82□□□□□ -1.64
NPC1-213ENST00000591955 FGF6P10767 208 aa4.82□□□□□ -1.64
NPC1-213ENST00000591955 EGR1P18146 543 aa4.82□□□□□ -1.64
NPC1-213ENST00000591955 ASIPP42127 132 aa4.82□□□□□ -1.64
NPC1-213ENST00000591955 VDAC2P45880 294 aaPredicted RBP4.82□□□□□ -1.64
NPC1-213ENST00000591955 MLF1P58340 268 aa4.82□□□□□ -1.64
NPC1-213ENST00000591955 RPL8P62917 257 aaKnown RBP4.82□□□□□ -1.64
NPC1-213ENST00000591955 RIGQ13278 110 aa4.82□□□□□ -1.64
NPC1-213ENST00000591955 ZNF146Q15072 292 aa4.82□□□□□ -1.64
NPC1-213ENST00000591955 PDCD1Q15116 288 aa4.82□□□□□ -1.64
NPC1-213ENST00000591955 PSG5Q15238 335 aa4.82□□□□□ -1.64
NPC1-213ENST00000591955 KIAA1644Q3SXP7 199 aa4.82□□□□□ -1.64
NPC1-213ENST00000591955 GAGE13Q4V321 117 aa4.82□□□□□ -1.64
NPC1-213ENST00000591955 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.82□□□□□ -1.64
NPC1-213ENST00000591955 Q6Q795 121 aa4.82□□□□□ -1.64
NPC1-213ENST00000591955 ADAMTSL5Q6ZMM2 481 aa4.82□□□□□ -1.64
NPC1-213ENST00000591955 Q6ZPA2 131 aa4.82□□□□□ -1.64
NPC1-213ENST00000591955 ZNF788Q6ZQV5 615 aa4.82□□□□□ -1.64
NPC1-213ENST00000591955 SLC25A48Q6ZT89 311 aaKnown RBP4.82□□□□□ -1.64
NPC1-213ENST00000591955 DOLPP1Q86YN1 238 aa4.82□□□□□ -1.64
NPC1-213ENST00000591955 YAF2Q8IY57 180 aa4.82□□□□□ -1.64
NPC1-213ENST00000591955 FADS6Q8N9I5 356 aa4.82□□□□□ -1.64
NPC1-213ENST00000591955 CACNG8Q8WXS5 425 aa4.82□□□□□ -1.64
NPC1-213ENST00000591955 DAZAP1Q96EP5 407 aaKnown RBP4.82□□□□□ -1.64
NPC1-213ENST00000591955 FMC1Q96HJ9 113 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms