RNA–Protein interactions for RNA: ENST00000591584.1

VPS25-206, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-206ENST00000591584 FAM167A-AS1Q96KT0 104 aa8.24□□□□□ -1.09
VPS25-206ENST00000591584 SLC25A2Q9BXI2 301 aa8.24□□□□□ -1.09
VPS25-206ENST00000591584 MEGF9Q9H1U4 602 aa8.24□□□□□ -1.09
VPS25-206ENST00000591584 GAR1Q9NY12 217 aaKnown RBP8.24□□□□□ -1.09
VPS25-206ENST00000591584 YTHDF2Q9Y5A9 579 aaKnown RBP8.24□□□□□ -1.09
VPS25-206ENST00000591584 IGLV11-55A0A075B6I3 123 aa8.23□□□□□ -1.09
VPS25-206ENST00000591584 IGHV1-69DA0A0B4J2H0 117 aa8.23□□□□□ -1.09
VPS25-206ENST00000591584 CENPVL3A0A0U1RRI6 287 aa8.23□□□□□ -1.09
VPS25-206ENST00000591584 A0A1W2PRD5 423 aa8.23□□□□□ -1.09
VPS25-206ENST00000591584 A0A1W2PRF3 423 aa8.23□□□□□ -1.09
VPS25-206ENST00000591584 A0A1W2PRM7 423 aa8.23□□□□□ -1.09
VPS25-206ENST00000591584 HELTA6NFD8 242 aa8.23□□□□□ -1.09
VPS25-206ENST00000591584 IGHV1-69P01742 117 aa8.23□□□□□ -1.09
VPS25-206ENST00000591584 S100A9P06702 114 aaKnown RBP8.23□□□□□ -1.09
VPS25-206ENST00000591584 S100A6P06703 90 aa8.23□□□□□ -1.09
VPS25-206ENST00000591584 RD3LP0DJH9 198 aa8.23□□□□□ -1.09
VPS25-206ENST00000591584 SAA4P35542 130 aa8.23□□□□□ -1.09
VPS25-206ENST00000591584 UBE2L3P68036 154 aaKnown RBP8.23□□□□□ -1.09
VPS25-206ENST00000591584 PATE2Q6UY27 113 aa8.23□□□□□ -1.09
VPS25-206ENST00000591584 LINC01551Q86U37 167 aa8.23□□□□□ -1.09
VPS25-206ENST00000591584 Q8N9W7 124 aa8.23□□□□□ -1.09
VPS25-206ENST00000591584 VN1R17PQ8TDU5 208 aa8.23□□□□□ -1.09
VPS25-206ENST00000591584 ZNF503Q96F45 646 aa8.23□□□□□ -1.09
VPS25-206ENST00000591584 FAM210BQ96KR6 192 aa8.23□□□□□ -1.09
VPS25-206ENST00000591584 PYGO2Q9BRQ0 406 aa8.23□□□□□ -1.09
VPS25-206ENST00000591584 ZNF355PQ9NSJ1 428 aa8.23□□□□□ -1.09
VPS25-206ENST00000591584 TMEM14CQ9P0S9 112 aa8.23□□□□□ -1.09
VPS25-206ENST00000591584 HIGD1AQ9Y241 93 aa8.23□□□□□ -1.09
VPS25-206ENST00000591584 NBASA2RRP1 2371 aa8.23□□□□□ -1.09
VPS25-206ENST00000591584 TPRP12270 2363 aaKnown RBP8.22□□□□□ -1.09
VPS25-206ENST00000591584 TRAV9-1A0A075B6T8 112 aa8.22□□□□□ -1.09
VPS25-206ENST00000591584 TRAV20A0A0B4J274 112 aa8.22□□□□□ -1.09
VPS25-206ENST00000591584 IGHV4-61A0A0C4DH41 118 aa8.22□□□□□ -1.09
VPS25-206ENST00000591584 MDFIC2A0A1B0GVS7 189 aa8.22□□□□□ -1.09
VPS25-206ENST00000591584 B4DSR2 109 aa8.22□□□□□ -1.09
VPS25-206ENST00000591584 K7EIM0 57 aa8.22□□□□□ -1.09
VPS25-206ENST00000591584 TOMM40O96008 361 aa8.22□□□□□ -1.09
VPS25-206ENST00000591584 PFN1P07737 140 aaKnown RBP8.22□□□□□ -1.09
VPS25-206ENST00000591584 ORM2P19652 201 aa8.22□□□□□ -1.09
VPS25-206ENST00000591584 RPS10P46783 165 aaKnown RBP8.22□□□□□ -1.09
VPS25-206ENST00000591584 RPL19P84098 196 aaKnown RBP8.22□□□□□ -1.09
VPS25-206ENST00000591584 FOXL1Q12952 345 aa8.22□□□□□ -1.09
VPS25-206ENST00000591584 C16orf82Q7Z2V1 217 aa8.22□□□□□ -1.09
VPS25-206ENST00000591584 OR1B1Q8NGR6 318 aa8.22□□□□□ -1.09
VPS25-206ENST00000591584 SGMS2Q8NHU3 365 aa8.22□□□□□ -1.09
VPS25-206ENST00000591584 Q8WTZ3 238 aa8.22□□□□□ -1.09
VPS25-206ENST00000591584 AJUBAQ96IF1 538 aa8.22□□□□□ -1.09
VPS25-206ENST00000591584 RBM14Q96PK6 669 aaKnown RBP8.22□□□□□ -1.09
VPS25-206ENST00000591584 ATP6V0BQ99437 205 aa8.22□□□□□ -1.09
VPS25-206ENST00000591584 MRPL36Q9P0J6 103 aaKnown RBP8.22□□□□□ -1.09
VPS25-206ENST00000591584 DMRT1Q9Y5R6 373 aa8.22□□□□□ -1.09
VPS25-206ENST00000591584 IGHV7-81A0A0B4J1V7 117 aa8.21□□□□□ -1.1
VPS25-206ENST00000591584 SCO2A0A1W2PP80 73 aa8.21□□□□□ -1.1
VPS25-206ENST00000591584 MSMBP08118 114 aa8.21□□□□□ -1.1
VPS25-206ENST00000591584 PSG1P11464 419 aa8.21□□□□□ -1.1
VPS25-206ENST00000591584 GALR1P47211 349 aa8.21□□□□□ -1.1
VPS25-206ENST00000591584 SUMO1P63165 101 aaKnown RBP8.21□□□□□ -1.1
VPS25-206ENST00000591584 TIGITQ495A1 244 aa8.21□□□□□ -1.1
VPS25-206ENST00000591584 FAM110DQ8TAY7 271 aaPredicted RBP8.21□□□□□ -1.1
VPS25-206ENST00000591584 FXYD5Q96DB9 178 aa8.21□□□□□ -1.1
VPS25-206ENST00000591584 SMIM12Q96EX1 92 aa8.21□□□□□ -1.1
VPS25-206ENST00000591584 SRD5A3Q9H8P0 318 aa8.21□□□□□ -1.1
VPS25-206ENST00000591584 MRPL27Q9P0M9 148 aaKnown RBP8.21□□□□□ -1.1
VPS25-206ENST00000591584 SPTBN1Q01082 2364 aaKnown RBP8.21□□□□□ -1.1
VPS25-206ENST00000591584 PKD1L2Q7Z442 2459 aa8.2□□□□□ -1.1
VPS25-206ENST00000591584 J3QLI3 93 aa8.2□□□□□ -1.1
VPS25-206ENST00000591584 M0QZK8 103 aa8.2□□□□□ -1.1
VPS25-206ENST00000591584 GNG7O60262 68 aa8.2□□□□□ -1.1
VPS25-206ENST00000591584 OR10J4P0C629 311 aa8.2□□□□□ -1.1
VPS25-206ENST00000591584 NBEAP1P0C6P0 100 aa8.2□□□□□ -1.1
VPS25-206ENST00000591584 APELAP0DMC3 54 aa8.2□□□□□ -1.1
VPS25-206ENST00000591584 CD24P25063 80 aa8.2□□□□□ -1.1
VPS25-206ENST00000591584 CRYBB3P26998 211 aa8.2□□□□□ -1.1
VPS25-206ENST00000591584 RPL35P42766 123 aaKnown RBP8.2□□□□□ -1.1
VPS25-206ENST00000591584 GNG4P50150 75 aa8.2□□□□□ -1.1
VPS25-206ENST00000591584 CNN1P51911 297 aaKnown RBP8.2□□□□□ -1.1
VPS25-206ENST00000591584 KIAA0141Q14154 515 aaPredicted RBP8.2□□□□□ -1.1
VPS25-206ENST00000591584 ZNF343Q6P1L6 599 aa8.2□□□□□ -1.1
VPS25-206ENST00000591584 LRRC75A-AS1Q8N1F1 130 aa8.2□□□□□ -1.1
VPS25-206ENST00000591584 OR10G8Q8NGN5 311 aa8.2□□□□□ -1.1
VPS25-206ENST00000591584 OCC1Q8TAD7 63 aa8.2□□□□□ -1.1
VPS25-206ENST00000591584 C2CD4CQ8TF44 421 aa8.2□□□□□ -1.1
VPS25-206ENST00000591584 SFRP2Q96HF1 295 aa8.2□□□□□ -1.1
VPS25-206ENST00000591584 BBC3Q96PG8 261 aaPredicted RBP8.2□□□□□ -1.1
VPS25-206ENST00000591584 FANCD2OSQ96PS1 177 aa8.2□□□□□ -1.1
VPS25-206ENST00000591584 BEX4Q9NWD9 120 aaPredicted RBP8.2□□□□□ -1.1
VPS25-206ENST00000591584 C21orf62Q9NYP8 219 aa8.2□□□□□ -1.1
VPS25-206ENST00000591584 CDC42EP3Q9UKI2 254 aa8.2□□□□□ -1.1
VPS25-206ENST00000591584 CHD8Q9HCK8 2581 aa8.19□□□□□ -1.1
VPS25-206ENST00000591584 IGHV4-30-2A0A087WSY4 118 aa8.19□□□□□ -1.1
VPS25-206ENST00000591584 TGIF2-C20orf24A0A0A6YYL0 155 aa8.19□□□□□ -1.1
VPS25-206ENST00000591584 TRAV5A0A0B4J249 113 aa8.19□□□□□ -1.1
VPS25-206ENST00000591584 WI2-2373I1.2A0A1W2PRP0 233 aa8.19□□□□□ -1.1
VPS25-206ENST00000591584 PPP5D1E7EU14 171 aa8.19□□□□□ -1.1
VPS25-206ENST00000591584 GGCTO75223 188 aaKnown RBP8.19□□□□□ -1.1
VPS25-206ENST00000591584 IGKV1-17P01599 117 aa8.19□□□□□ -1.1
VPS25-206ENST00000591584 IGHV3-48P01763 117 aa8.19□□□□□ -1.1
VPS25-206ENST00000591584 TYMSP04818 313 aa8.19□□□□□ -1.1
VPS25-206ENST00000591584 CXCL1P09341 107 aa8.19□□□□□ -1.1
VPS25-206ENST00000591584 HIST1H1EP10412 219 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms