RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 ZNF343Q6P1L6 599 aa12.81□□□□□ -0.36
GCDH-213ENST00000590627 TMEM144Q7Z5S9 345 aa12.81□□□□□ -0.36
GCDH-213ENST00000590627 MRAPQ8TCY5 172 aa12.81□□□□□ -0.36
GCDH-213ENST00000590627 ATP5SQ99766 215 aa12.81□□□□□ -0.36
GCDH-213ENST00000590627 WFDC1Q9HC57 220 aa12.81□□□□□ -0.36
GCDH-213ENST00000590627 ADARB2-AS1A8MUL3 147 aa12.8□□□□□ -0.36
GCDH-213ENST00000590627 CLN5O75503 358 aa12.8□□□□□ -0.36
GCDH-213ENST00000590627 IGHV3-48P01763 117 aa12.8□□□□□ -0.36
GCDH-213ENST00000590627 HNRNPCP07910 306 aaKnown RBP eCLIP12.8□□□□□ -0.36
GCDH-213ENST00000590627 NPBWR1P48145 328 aa12.8□□□□□ -0.36
GCDH-213ENST00000590627 RND2P52198 227 aa12.8□□□□□ -0.36
GCDH-213ENST00000590627 NKX2-5P52952 324 aaPredicted RBP12.8□□□□□ -0.36
GCDH-213ENST00000590627 CLINT1Q14677 625 aa12.8□□□□□ -0.36
GCDH-213ENST00000590627 ACSM6Q6P461 480 aa12.8□□□□□ -0.36
GCDH-213ENST00000590627 TMUB2Q71RG4 321 aa12.8□□□□□ -0.36
GCDH-213ENST00000590627 NPIPB3Q92617 1050 aa12.8□□□□□ -0.36
GCDH-213ENST00000590627 CCDC140Q96MF4 163 aa12.8□□□□□ -0.36
GCDH-213ENST00000590627 CITED2Q99967 270 aaPredicted RBP12.8□□□□□ -0.36
GCDH-213ENST00000590627 PARD6GQ9BYG4 376 aaPredicted RBP12.8□□□□□ -0.36
GCDH-213ENST00000590627 SMIM3Q9BZL3 60 aa12.8□□□□□ -0.36
GCDH-213ENST00000590627 NPVFQ9HCQ7 196 aa12.8□□□□□ -0.36
GCDH-213ENST00000590627 GAR1Q9NY12 217 aaKnown RBP12.8□□□□□ -0.36
GCDH-213ENST00000590627 LSM4Q9Y4Z0 139 aaKnown RBP12.8□□□□□ -0.36
GCDH-213ENST00000590627 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.79□□□□□ -0.36
GCDH-213ENST00000590627 THAP8Q8NA92 274 aa12.79□□□□□ -0.36
GCDH-213ENST00000590627 ACY3Q96HD9 319 aa12.79□□□□□ -0.36
GCDH-213ENST00000590627 ARPC5LQ9BPX5 153 aa12.79□□□□□ -0.36
GCDH-213ENST00000590627 ARL6Q9H0F7 186 aa12.79□□□□□ -0.36
GCDH-213ENST00000590627 CYTL1Q9NRR1 136 aa12.79□□□□□ -0.36
GCDH-213ENST00000590627 WDR83OSQ9Y284 106 aa12.79□□□□□ -0.36
GCDH-213ENST00000590627 TRAV30A0A087WSZ9 112 aa12.78□□□□□ -0.36
GCDH-213ENST00000590627 TCRBV4S1A1TA0A5B7 111 aa12.78□□□□□ -0.36
GCDH-213ENST00000590627 BCL2L11O43521 198 aa12.78□□□□□ -0.36
GCDH-213ENST00000590627 LGALS1P09382 135 aaKnown RBP12.78□□□□□ -0.36
GCDH-213ENST00000590627 RUNX1Q01196 453 aa12.78□□□□□ -0.36
GCDH-213ENST00000590627 AKR1C1Q04828 323 aa12.78□□□□□ -0.36
GCDH-213ENST00000590627 ZNF266Q14584 549 aa12.78□□□□□ -0.36
GCDH-213ENST00000590627 WFDC9Q8NEX5 89 aa12.78□□□□□ -0.36
GCDH-213ENST00000590627 GNB4Q9HAV0 340 aa12.78□□□□□ -0.36
GCDH-213ENST00000590627 AURKAIP1Q9NWT8 199 aaPredicted RBP12.78□□□□□ -0.36
GCDH-213ENST00000590627 S4R3C0 116 aa12.78□□□□□ -0.36
GCDH-213ENST00000590627 IGKV1OR2-108A0A075B7D4 117 aa12.77□□□□□ -0.37
GCDH-213ENST00000590627 UBE2L5PA0A1B0GUS4 154 aa12.77□□□□□ -0.37
GCDH-213ENST00000590627 KANTRA0A1W2PQU2 76 aa12.77□□□□□ -0.37
GCDH-213ENST00000590627 SMCO3A2RU48 225 aa12.77□□□□□ -0.37
GCDH-213ENST00000590627 MPDU1O75352 247 aa12.77□□□□□ -0.37
GCDH-213ENST00000590627 IFNA5P01569 189 aa12.77□□□□□ -0.37
GCDH-213ENST00000590627 IGHV3-11P01762 117 aa12.77□□□□□ -0.37
GCDH-213ENST00000590627 IGHV3-23P01764 117 aa12.77□□□□□ -0.37
GCDH-213ENST00000590627 CLEC3BP05452 202 aa12.77□□□□□ -0.37
GCDH-213ENST00000590627 IGLC1P0CG04 106 aa12.77□□□□□ -0.37
GCDH-213ENST00000590627 C4BPBP20851 252 aa12.77□□□□□ -0.37
GCDH-213ENST00000590627 Q56UQ5 140 aa12.77□□□□□ -0.37
GCDH-213ENST00000590627 TEPPQ6URK8 271 aa12.77□□□□□ -0.37
GCDH-213ENST00000590627 C4orf3Q8WVX3 66 aa12.77□□□□□ -0.37
GCDH-213ENST00000590627 TRGV9Q99603 122 aa12.77□□□□□ -0.37
GCDH-213ENST00000590627 TSSC4Q9Y5U2 329 aaPredicted RBP12.77□□□□□ -0.37
GCDH-213ENST00000590627 IGKV1D-37A0A075B6S9 117 aa12.76□□□□□ -0.37
GCDH-213ENST00000590627 BORCS7-ASMTA0A0B4J1R7 106 aa12.76□□□□□ -0.37
GCDH-213ENST00000590627 OR2T8A6NH00 312 aa12.76□□□□□ -0.37
GCDH-213ENST00000590627 I3L521 148 aa12.76□□□□□ -0.37
GCDH-213ENST00000590627 GNG7O60262 68 aa12.76□□□□□ -0.37
GCDH-213ENST00000590627 SCGB2A1O75556 95 aa12.76□□□□□ -0.37
GCDH-213ENST00000590627 JTBO76095 146 aa12.76□□□□□ -0.37
GCDH-213ENST00000590627 IGKV1-17P01599 117 aa12.76□□□□□ -0.37
GCDH-213ENST00000590627 CTSGP08311 255 aa12.76□□□□□ -0.37
GCDH-213ENST00000590627 OR10J1P30954 320 aa12.76□□□□□ -0.37
GCDH-213ENST00000590627 RPL7L1Q6DKI1 246 aaKnown RBP12.76□□□□□ -0.37
GCDH-213ENST00000590627 SPSB3Q6PJ21 355 aa12.76□□□□□ -0.37
GCDH-213ENST00000590627 CLEC19AQ6UXS0 136 aa12.76□□□□□ -0.37
GCDH-213ENST00000590627 UBAC2Q8NBM4 344 aa12.76□□□□□ -0.37
GCDH-213ENST00000590627 WDR61Q9GZS3 305 aaKnown RBP12.76□□□□□ -0.37
GCDH-213ENST00000590627 PEF1Q9UBV8 284 aaKnown RBP12.76□□□□□ -0.37
GCDH-213ENST00000590627 TGOLN2O43493 480 aa12.75□□□□□ -0.37
GCDH-213ENST00000590627 GPR183P32249 361 aa12.75□□□□□ -0.37
GCDH-213ENST00000590627 ADMP35318 185 aa12.75□□□□□ -0.37
GCDH-213ENST00000590627 YPEL3P61236 119 aaPredicted RBP12.75□□□□□ -0.37
GCDH-213ENST00000590627 RAB31Q13636 194 aa12.75□□□□□ -0.37
GCDH-213ENST00000590627 OPCMLQ14982 345 aa12.75□□□□□ -0.37
GCDH-213ENST00000590627 BTNL8Q6UX41 500 aa12.75□□□□□ -0.37
GCDH-213ENST00000590627 ARV1Q9H2C2 271 aa12.75□□□□□ -0.37
GCDH-213ENST00000590627 ZFP92A6NM28 416 aa12.74□□□□□ -0.37
GCDH-213ENST00000590627 NUPL2O15504 423 aaKnown RBP12.74□□□□□ -0.37
GCDH-213ENST00000590627 CD33P20138 364 aa12.74□□□□□ -0.37
GCDH-213ENST00000590627 FGF7P21781 194 aa12.74□□□□□ -0.37
GCDH-213ENST00000590627 SCGB1C1Q8TD33 95 aa12.74□□□□□ -0.37
GCDH-213ENST00000590627 MGST2Q99735 147 aa12.74□□□□□ -0.37
GCDH-213ENST00000590627 CHRDL1Q9BU40 450 aa12.74□□□□□ -0.37
GCDH-213ENST00000590627 ANKRD34BA5PLL1 514 aa12.73□□□□□ -0.37
GCDH-213ENST00000590627 AGPAT2O15120 278 aa12.73□□□□□ -0.37
GCDH-213ENST00000590627 TRBV12-3P01733 135 aa12.73□□□□□ -0.37
GCDH-213ENST00000590627 HSPB1P04792 205 aaKnown RBP12.73□□□□□ -0.37
GCDH-213ENST00000590627 FABP1P07148 127 aa12.73□□□□□ -0.37
GCDH-213ENST00000590627 ARL3P36405 182 aa12.73□□□□□ -0.37
GCDH-213ENST00000590627 SELENOTP62341 195 aa12.73□□□□□ -0.37
GCDH-213ENST00000590627 EIF5AP63241 154 aaKnown RBP12.73□□□□□ -0.37
GCDH-213ENST00000590627 TIGITQ495A1 244 aa12.73□□□□□ -0.37
GCDH-213ENST00000590627 KHDC1LQ5JSQ8 128 aa12.73□□□□□ -0.37
GCDH-213ENST00000590627 C18orf65Q6ZTR6 163 aa12.73□□□□□ -0.37
GCDH-213ENST00000590627 SLC51BQ86UW2 128 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms